FFCP PHASE1:Mm9::chr5:115879631..115879692,+: Difference between revisions
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|id=chr5:115879631..115879692,+ | |id=chr5:115879631..115879692,+ | ||
|ontology_enrichment_celltype=CL:0000221!3.04e-16!44;CL:0000133!3.04e-16!44;CL:0002319!1.01e-15!43;CL:0000540!5.50e-13!33;CL:0000047!5.50e-13!33;CL:0000031!5.50e-13!33;CL:0000404!5.50e-13!33;CL:0000055!1.10e-11!50;CL:0000393!9.50e-10!39;CL:0000211!9.50e-10!39;CL:0000117!8.46e-09!23;CL:0000337!8.46e-09!23 | |ontology_enrichment_celltype=CL:0000221!3.04e-16!44;CL:0000133!3.04e-16!44;CL:0002319!1.01e-15!43;CL:0000540!5.50e-13!33;CL:0000047!5.50e-13!33;CL:0000031!5.50e-13!33;CL:0000404!5.50e-13!33;CL:0000055!1.10e-11!50;CL:0000393!9.50e-10!39;CL:0000211!9.50e-10!39;CL:0000117!8.46e-09!23;CL:0000337!8.46e-09!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.50e-16,44;CL:0000133,2.50e-16,44;CL:0002319,8.51e-16,43;CL:0000540,2.95e-13,33;CL:0000047,2.95e-13,33;CL:0000031,2.95e-13,33;CL:0000404,2.95e-13,33;CL:0000393,8.11e-10,39;CL:0000211,8.11e-10,39;CL:0000117,5.69e-09,23;CL:0000337,5.69e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!4.73e-22!102;UBERON:0000924!4.73e-22!102;UBERON:0006601!4.73e-22!102;UBERON:0001017!1.35e-21!73;UBERON:0005743!1.35e-21!73;UBERON:0000073!1.54e-20!75;UBERON:0001016!1.54e-20!75;UBERON:0002346!5.64e-19!71;UBERON:0003075!5.64e-19!71;UBERON:0007284!5.64e-19!71;UBERON:0000033!3.53e-16!63;UBERON:0003056!5.17e-15!49;UBERON:0001049!9.57e-13!52;UBERON:0005068!9.57e-13!52;UBERON:0006241!9.57e-13!52;UBERON:0007135!9.57e-13!52;UBERON:0000955!1.46e-11!50;UBERON:0006238!1.46e-11!50;UBERON:0002616!2.83e-11!49;UBERON:0003080!8.35e-10!40;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0000468!1.39e-08!333;UBERON:0000153!2.42e-07!94;UBERON:0000922!2.45e-07!328;UBERON:0002020!3.69e-07!34;UBERON:0000970!4.94e-07!9;UBERON:0000019!4.94e-07!9;UBERON:0000047!4.94e-07!9;UBERON:0004088!4.94e-07!9;UBERON:0002104!4.94e-07!9;UBERON:0001456!4.94e-07!9;UBERON:0003072!4.94e-07!9;UBERON:0003071!4.94e-07!9;UBERON:0004128!4.94e-07!9 | |ontology_enrichment_uberon=UBERON:0004121!4.73e-22!102;UBERON:0000924!4.73e-22!102;UBERON:0006601!4.73e-22!102;UBERON:0001017!1.35e-21!73;UBERON:0005743!1.35e-21!73;UBERON:0000073!1.54e-20!75;UBERON:0001016!1.54e-20!75;UBERON:0002346!5.64e-19!71;UBERON:0003075!5.64e-19!71;UBERON:0007284!5.64e-19!71;UBERON:0000033!3.53e-16!63;UBERON:0003056!5.17e-15!49;UBERON:0001049!9.57e-13!52;UBERON:0005068!9.57e-13!52;UBERON:0006241!9.57e-13!52;UBERON:0007135!9.57e-13!52;UBERON:0000955!1.46e-11!50;UBERON:0006238!1.46e-11!50;UBERON:0002616!2.83e-11!49;UBERON:0003080!8.35e-10!40;UBERON:0002780!1.02e-09!39;UBERON:0001890!1.02e-09!39;UBERON:0006240!1.02e-09!39;UBERON:0000468!1.39e-08!333;UBERON:0000153!2.42e-07!94;UBERON:0000922!2.45e-07!328;UBERON:0002020!3.69e-07!34;UBERON:0000970!4.94e-07!9;UBERON:0000019!4.94e-07!9;UBERON:0000047!4.94e-07!9;UBERON:0004088!4.94e-07!9;UBERON:0002104!4.94e-07!9;UBERON:0001456!4.94e-07!9;UBERON:0003072!4.94e-07!9;UBERON:0003071!4.94e-07!9;UBERON:0004128!4.94e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.86e-22,95;UBERON:0000924,1.86e-22,95;UBERON:0006601,1.86e-22,95;UBERON:0001017,4.51e-22,73;UBERON:0001016,9.50e-21,75;UBERON:0002346,3.90e-20,64;UBERON:0003075,3.90e-20,64;UBERON:0007284,3.90e-20,64;UBERON:0010371,2.38e-18,73;UBERON:0003056,2.48e-15,49;UBERON:0001049,5.20e-13,52;UBERON:0005068,5.20e-13,52;UBERON:0006241,5.20e-13,52;UBERON:0007135,5.20e-13,52;UBERON:0000073,8.96e-13,54;UBERON:0010314,1.07e-12,92;UBERON:0000955,8.66e-12,47;UBERON:0006238,8.66e-12,47;UBERON:0002616,1.70e-11,46;UBERON:0003080,5.32e-10,40;UBERON:0002780,6.55e-10,39;UBERON:0001890,6.55e-10,39;UBERON:0006240,6.55e-10,39;UBERON:0000922,1.82e-07,320;UBERON:0002020,2.71e-07,34;UBERON:0000970,3.66e-07,9;UBERON:0000019,3.66e-07,9;UBERON:0000047,3.66e-07,9;UBERON:0010312,3.66e-07,9;UBERON:0004088,3.66e-07,9;UBERON:0002104,3.66e-07,9;UBERON:0001456,3.66e-07,9;UBERON:0003072,3.66e-07,9;UBERON:0004128,3.66e-07,9;UBERON:0003071,3.66e-07,9 | |||
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| ||
|short_description=p1@Msi1 | |short_description=p1@Msi1 | ||
}} | }} |
Revision as of 09:49, 14 November 2012
Short description: | p1@Msi1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Msi1_5end |
Coexpression cluster: | MCL_coexpression_mm9:573 |
Association with transcript: | -1bp_to_NM_008629, uc008zdu.1, uc008zdv.1_5end |
EntrezGene: | Msi1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 2.50e-16 | 44 |
neurectodermal cell | 2.50e-16 | 44 |
neural cell | 8.51e-16 | 43 |
neuron | 2.95e-13 | 33 |
neuronal stem cell | 2.95e-13 | 33 |
neuroblast | 2.95e-13 | 33 |
electrically signaling cell | 2.95e-13 | 33 |
electrically responsive cell | 8.11e-10 | 39 |
electrically active cell | 8.11e-10 | 39 |
CNS neuron (sensu Vertebrata) | 5.69e-09 | 23 |
neuroblast (sensu Vertebrata) | 5.69e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.86e-22 | 95 |
ectoderm | 1.86e-22 | 95 |
presumptive ectoderm | 1.86e-22 | 95 |
central nervous system | 4.51e-22 | 73 |
nervous system | 9.50e-21 | 75 |
neurectoderm | 3.90e-20 | 64 |
neural plate | 3.90e-20 | 64 |
presumptive neural plate | 3.90e-20 | 64 |
ecto-epithelium | 2.38e-18 | 73 |
pre-chordal neural plate | 2.48e-15 | 49 |
neural tube | 5.20e-13 | 52 |
neural rod | 5.20e-13 | 52 |
future spinal cord | 5.20e-13 | 52 |
neural keel | 5.20e-13 | 52 |
regional part of nervous system | 8.96e-13 | 54 |
structure with developmental contribution from neural crest | 1.07e-12 | 92 |
brain | 8.66e-12 | 47 |
future brain | 8.66e-12 | 47 |
regional part of brain | 1.70e-11 | 46 |
anterior neural tube | 5.32e-10 | 40 |
regional part of forebrain | 6.55e-10 | 39 |
forebrain | 6.55e-10 | 39 |
future forebrain | 6.55e-10 | 39 |
embryo | 1.82e-07 | 320 |
gray matter | 2.71e-07 | 34 |
eye | 3.66e-07 | 9 |
camera-type eye | 3.66e-07 | 9 |
simple eye | 3.66e-07 | 9 |
immature eye | 3.66e-07 | 9 |
ocular region | 3.66e-07 | 9 |
visual system | 3.66e-07 | 9 |
face | 3.66e-07 | 9 |
optic cup | 3.66e-07 | 9 |
optic vesicle | 3.66e-07 | 9 |
eye primordium | 3.66e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.