FFCP PHASE1:Mm9::chr2:115893669..115893711,+: Difference between revisions
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|id=chr2:115893669..115893711,+ | |id=chr2:115893669..115893711,+ | ||
|ontology_enrichment_celltype=CL:0002609!4.50e-07!6;CL:0000117!4.82e-07!23;CL:0000337!4.82e-07!23 | |ontology_enrichment_celltype=CL:0002609!4.50e-07!6;CL:0000117!4.82e-07!23;CL:0000337!4.82e-07!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.41e-32,6;CL:0002608,1.90e-17,3;CL:0000117,1.11e-10,23;CL:0000337,1.11e-10,23;CL:0000540,3.14e-07,33;CL:0000047,3.14e-07,33;CL:0000031,3.14e-07,33;CL:0000404,3.14e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000956,7.50e-09,21;UBERON:0001869,7.50e-09,21;UBERON:0000203,7.50e-09,21;UBERON:0003528,1.97e-08,29;UBERON:0002791,1.97e-08,29;UBERON:0001893,1.97e-08,29;UBERON:0001954,9.21e-08,7;UBERON:0003022,9.21e-08,7;UBERON:0002421,9.21e-08,7;UBERON:0000349,9.21e-08,7;UBERON:0002600,9.21e-08,7;UBERON:0002020,4.37e-07,34;UBERON:0000993,8.36e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.97010263386108,1.35005938331691,1.47227472945967,0.856952953211411,0.441737081903227,4.16468717330844,5.46319184803947,5.51531271966013,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0,0.294628585473668,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,2.01046963380583,0.173824320192276,0,0,0.324482526135515,0.81471491080253,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.308713837137853,0,0,1.49301775374664,1.85789337488351,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.758671603812327,0.799739588268102,1.1270773567308,0.610953983535943,0.581857461502877,1.05203729835478,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.469380496577004,0.502518772325447,0,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0.712262414669021,0.651547837414304,4.12425307431339,0,0.485561272309963,0.604647113929502,0.565815239267694,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,0.406638934253697,0.432021363287205,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0.39061315453185,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,1.28206136987086,0.643105137237198,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.628839487883947,0.183843508450014,1.33348036680969,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.194429899074283,0,0,0,0,0,0,0,0,0.404632921719196,1.05798195854407,0,0,0,0,0,0,0,0.384218305321555,1.97010263386108,1.35005938331691,1.47227472945967,0.856952953211411,0.441737081903227,4.16468717330844,5.46319184803947,5.51531271966013,0,0.127687338085188,0.153606533256243,0.395658863190582,0.0914876436024097,0,0,0,0,0.294628585473668,0.711858403995515,0.559198337475902,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0.125666591329675,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0.915001205637253,2.01046963380583,0.173824320192276,0,0,0.324482526135515,0.81471491080253,0,0,0,0,0,0.180062129805349,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0,0,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0.23674473558521,0.393528463494808,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.308713837137853,0,0,1.49301775374664,1.85789337488351,0.515469845288373,0.403367049246685,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.758671603812327,0.799739588268102,1.1270773567308,0.610953983535943,0.581857461502877,1.05203729835478,0.252946148497029,0.147610147979602,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0.469380496577004,0.502518772325447,0,0,0,0,0.318909537314974,0.163863314715738,0,0,0,0,0,0,0,0.468846746368813,0,0,0,0,0.215423397732799,0,0,0,0,0,0,2.57057053137446,0.141940085208269,0.712262414669021,0.651547837414304,4.12425307431339,0,0.485561272309963,0.604647113929502,0.565815239267694,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,3.00519193902079,0.406638934253697,0.432021363287205,0,0.218362563746178,0.269728692769641,0.41326727862668,0,0,0.621339313086926,0,0.299033092087958,0,0,0,0,0,0.39061315453185,0,0,0,0.632022241256357,0,0.102710957164827,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.750729901804728,1.28206136987086,0.643105137237198,0,0,0,0,0.171853182343688,0,0.755393897389701,0,0,0,0,0.415149390336707,0.798049746802062,0.512200817262403,0.729320151204882,0.628839487883947,0.183843508450014,1.33348036680969,0,0,0.252697211763798,0.50695859978048,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0,0.118635018124174,0.591026894253381,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p2@ENSMUST00000156095,p2@uc008lrc.1 | |short_description=p2@ENSMUST00000156095,p2@uc008lrc.1 | ||
}} | }} |
Revision as of 12:43, 13 November 2012
Short description: | p2@ENSMUST00000156095, p2@uc008lrc.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000156095_5end, CAGE_peak_2_at_uc008lrc.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:985 |
Association with transcript: | 0bp_to_ENSMUST00000156095, uc008lrc.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.41e-32 | 6 |
hippocampal neuron | 1.90e-17 | 3 |
CNS neuron (sensu Vertebrata) | 1.11e-10 | 23 |
neuroblast (sensu Vertebrata) | 1.11e-10 | 23 |
neuron | 3.14e-07 | 33 |
neuronal stem cell | 3.14e-07 | 33 |
neuroblast | 3.14e-07 | 33 |
electrically signaling cell | 3.14e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
cerebral cortex | 7.50e-09 | 21 |
cerebral hemisphere | 7.50e-09 | 21 |
pallium | 7.50e-09 | 21 |
brain grey matter | 1.97e-08 | 29 |
regional part of telencephalon | 1.97e-08 | 29 |
telencephalon | 1.97e-08 | 29 |
Ammon's horn | 9.21e-08 | 7 |
lobe parts of cerebral cortex | 9.21e-08 | 7 |
hippocampal formation | 9.21e-08 | 7 |
limbic system | 9.21e-08 | 7 |
limbic lobe | 9.21e-08 | 7 |
gray matter | 4.37e-07 | 34 |
oviduct | 8.36e-07 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.