FFCP PHASE1:Mm9::chr11:121564617..121564625,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:121564617..121564625,-|id=chr11:121564617..121564625,-|ontology_enrichment_celltype=CL:0000063!4.52e-14!66;CL:0000988!3.19e-13!32;CL:0002032!3.19e-13!32;CL:0000037!3.19e-13!32;CL:0000566!3.19e-13!32;CL:0000837!3.19e-13!32;CL:0002320!6.92e-13!46;CL:0000134!6.92e-13!46;CL:0000219!1.56e-11!54;CL:0000144!4.58e-11!121;CL:0000012!4.58e-11!121;CL:0000034!1.28e-10!97;CL:0000723!1.92e-09!91;CL:0000048!1.92e-09!91;CL:0002371!2.79e-09!118;CL:0000738!3.52e-09!17;CL:0002087!3.52e-09!17;CL:0002031!3.28e-08!25;CL:0000838!7.41e-08!12;CL:0000548!1.69e-07!115;CL:0000004!1.69e-07!115;CL:0000255!1.69e-07!115;CL:0000049!1.96e-07!19;CL:0000084!2.83e-07!11;CL:0000827!2.83e-07!11;CL:0000542!4.55e-07!13;CL:0000051!4.55e-07!13;CL:0000557!6.68e-07!7|ontology_enrichment_celltype_v019_2=CL:0000049,1.38e-10,19;CL:0000557,1.42e-10,7;CL:0002476,7.03e-10,2;CL:0002320,8.96e-10,46;CL:0000134,8.96e-10,46;CL:0000219,4.51e-08,54;CL:0000034,8.45e-08,97;CL:0000988,9.75e-08,32;CL:0002032,9.75e-08,32;CL:0000037,9.75e-08,32;CL:0000837,9.75e-08,32;CL:0000723,3.25e-07,91;CL:0000048,3.25e-07,91;CL:0002092,7.34e-07,3;CL:0002540,7.34e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.68e-14,3;DOID:4045,2.68e-14,3;DOID:0050686,2.17e-07,6|ontology_enrichment_uberon=UBERON:0002384!6.92e-13!46;UBERON:0002371!1.56e-09!16;UBERON:0002204!6.73e-09!32;UBERON:0001474!2.15e-08!22;UBERON:0004765!2.15e-08!22;UBERON:0001434!2.15e-08!22|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.44e-10,32;UBERON:0002384,8.96e-10,46;UBERON:0002371,1.05e-09,16;UBERON:0001474,6.38e-07,22;UBERON:0004765,6.38e-07,22;UBERON:0001434,6.38e-07,22|phase1_expression=0,0.697950815278722,0,2.72217790176147,2.00358291978539,0,0,0.903863264091034,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.0992909512008853,0.261199789138935,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,2.51118978442145,1.5626706890476,1.57057123192139,15.2940186888064,8.87959130445979,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.34437519656986,0,0,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0,0.384218305321555,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.441683036920787,0,0,0,0,0,1.07833612055328,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.679913719975421,1.53946597556024,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr11:121564617..121564625,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:121564617..121564625,- | |||
|id=chr11:121564617..121564625,- | |||
|ontology_enrichment_celltype=CL:0000063!4.52e-14!66;CL:0000988!3.19e-13!32;CL:0002032!3.19e-13!32;CL:0000037!3.19e-13!32;CL:0000566!3.19e-13!32;CL:0000837!3.19e-13!32;CL:0002320!6.92e-13!46;CL:0000134!6.92e-13!46;CL:0000219!1.56e-11!54;CL:0000144!4.58e-11!121;CL:0000012!4.58e-11!121;CL:0000034!1.28e-10!97;CL:0000723!1.92e-09!91;CL:0000048!1.92e-09!91;CL:0002371!2.79e-09!118;CL:0000738!3.52e-09!17;CL:0002087!3.52e-09!17;CL:0002031!3.28e-08!25;CL:0000838!7.41e-08!12;CL:0000548!1.69e-07!115;CL:0000004!1.69e-07!115;CL:0000255!1.69e-07!115;CL:0000049!1.96e-07!19;CL:0000084!2.83e-07!11;CL:0000827!2.83e-07!11;CL:0000542!4.55e-07!13;CL:0000051!4.55e-07!13;CL:0000557!6.68e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.38e-10,19;CL:0000557,1.42e-10,7;CL:0002476,7.03e-10,2;CL:0002320,8.96e-10,46;CL:0000134,8.96e-10,46;CL:0000219,4.51e-08,54;CL:0000034,8.45e-08,97;CL:0000988,9.75e-08,32;CL:0002032,9.75e-08,32;CL:0000037,9.75e-08,32;CL:0000837,9.75e-08,32;CL:0000723,3.25e-07,91;CL:0000048,3.25e-07,91;CL:0002092,7.34e-07,3;CL:0002540,7.34e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.68e-14,3;DOID:4045,2.68e-14,3;DOID:0050686,2.17e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.92e-13!46;UBERON:0002371!1.56e-09!16;UBERON:0002204!6.73e-09!32;UBERON:0001474!2.15e-08!22;UBERON:0004765!2.15e-08!22;UBERON:0001434!2.15e-08!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,3.44e-10,32;UBERON:0002384,8.96e-10,46;UBERON:0002371,1.05e-09,16;UBERON:0001474,6.38e-07,22;UBERON:0004765,6.38e-07,22;UBERON:0001434,6.38e-07,22 | |||
|phase1_expression=0,0.697950815278722,0,2.72217790176147,2.00358291978539,0,0,0.903863264091034,0.281577444303333,0.234064526321993,0,0,0.684802919724823,0.699363219351979,0,0.202475267389826,0,0.315462165358238,0.274228867211478,0,0.17008658030214,0.0992909512008853,0.261199789138935,0,0,0.57423196411502,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0.816677425049476,2.51118978442145,1.5626706890476,1.57057123192139,15.2940186888064,8.87959130445979,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,1.34437519656986,0,0,0.515672092277442,0,0,0,0,0,0.899899717281399,1.97773272513395,1.4209602298922,0,0.384218305321555,0,0,0,0.571301968807607,0.662605622854841,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0.142371680799103,0,0.075726193333184,0.302286240427142,1.15945795480671,0,0,0,0,0,0,0,0,0.35333957451034,0.422530259330042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0.441683036920787,0,0,0,0,0,1.07833612055328,1.19980546198682,1.39777249780371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187403449119458,0.517406741478031,0,0,0,0,0,0,0,0,0.702213187313235,1.80143534980301,1.98914449576915,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,3.01582567878545,1.08781136763742,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0.161464426695906,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0,0,0,0,0,0,0.679913719975421,1.53946597556024,0.552799895217695,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0.755393897389701,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr11:121564617..121564625,- | |||
}} |
Revision as of 19:10, 12 September 2013
Short description: | p@chr11:121564617..121564625, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:121564617..121564625, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.38e-10 | 19 |
granulocyte monocyte progenitor cell | 1.42e-10 | 7 |
bone marrow macrophage | 7.03e-10 | 2 |
connective tissue cell | 8.96e-10 | 46 |
mesenchymal cell | 8.96e-10 | 46 |
motile cell | 4.51e-08 | 54 |
stem cell | 8.45e-08 | 97 |
hematopoietic cell | 9.75e-08 | 32 |
hematopoietic oligopotent progenitor cell | 9.75e-08 | 32 |
hematopoietic stem cell | 9.75e-08 | 32 |
hematopoietic multipotent progenitor cell | 9.75e-08 | 32 |
somatic stem cell | 3.25e-07 | 91 |
multi fate stem cell | 3.25e-07 | 91 |
bone marrow cell | 7.34e-07 | 3 |
mesenchymal stem cell of the bone marrow | 7.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 3.44e-10 | 32 |
connective tissue | 8.96e-10 | 46 |
bone marrow | 1.05e-09 | 16 |
bone element | 6.38e-07 | 22 |
skeletal element | 6.38e-07 | 22 |
skeletal system | 6.38e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.68e-14 | 3 |
muscle cancer | 2.68e-14 | 3 |
organ system cancer | 2.17e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.