FFCP PHASE1:Mm9::chr11:107289545..107289555,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=-34bp_to_ENSMUST00000136927,uc007maq.1_5end|description=CAGE_peak_5_at_ENSMUST00000136927_5end,CAGE_peak_5_at_uc007maq.1_5end|id=chr11:107289545..107289555,+|ontology_enrichment_celltype=CL:0000624!1.15e-11!8;CL:0000893!1.62e-10!6;CL:0002489!1.62e-10!6;CL:0000898!1.62e-10!6;CL:0000809!1.62e-10!6;CL:0000810!1.62e-10!6;CL:0000895!1.62e-10!6;CL:0000808!1.62e-10!6;CL:0000894!1.62e-10!6;CL:0000806!1.62e-10!6;CL:0000807!1.62e-10!6;CL:0000805!1.62e-10!6;CL:0002425!1.62e-10!6;CL:0002436!1.62e-10!6;CL:0002427!1.62e-10!6;CL:0002428!1.62e-10!6;CL:0002429!1.62e-10!6;CL:0002433!1.62e-10!6;CL:0002431!1.62e-10!6;CL:0002432!1.62e-10!6;CL:0000791!2.40e-10!9;CL:0000789!2.40e-10!9;CL:0002420!2.40e-10!9;CL:0002419!2.40e-10!9;CL:0000790!2.40e-10!9;CL:0000084!2.02e-08!11;CL:0000827!2.02e-08!11;CL:0000838!1.07e-07!12;CL:0000542!4.36e-07!13;CL:0000051!4.36e-07!13|ontology_enrichment_celltype_v019_2=CL:0000355,3.72e-13,9|ontology_enrichment_disease=DOID:0060100!8.08e-13!3;DOID:4045!8.08e-13!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.86e-38,3;DOID:4045,8.86e-38,3;DOID:0050686,2.44e-19,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.72e-13,9;UBERON:0002036,3.72e-13,9;UBERON:0002385,3.72e-13,9;UBERON:0000486,3.72e-13,9;UBERON:0007503,3.72e-13,9;UBERON:0001015,3.72e-13,9;UBERON:0002329,3.72e-13,9;UBERON:0003082,3.72e-13,9;UBERON:0003059,3.72e-13,9;UBERON:0007282,3.72e-13,9;UBERON:0004290,3.72e-13,9;UBERON:0009618,3.72e-13,9;UBERON:0000383,6.49e-12,10;UBERON:0007524,6.77e-11,11;UBERON:0003077,6.77e-11,11;UBERON:0007285,6.77e-11,11|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,1.54096171402954,0.558405112967355,0,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,3.1253413780952,3.14114246384279,11.7646297606203,8.87959130445979,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@ENSMUST00000136927,p5@uc007maq.1}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt= | |||
|association_with_transcript=-34bp_to_ENSMUST00000136927,uc007maq.1_5end | |||
|description=CAGE_peak_5_at_ENSMUST00000136927_5end,CAGE_peak_5_at_uc007maq.1_5end | |||
|id=chr11:107289545..107289555,+ | |||
|ontology_enrichment_celltype=CL:0000624!1.15e-11!8;CL:0000893!1.62e-10!6;CL:0002489!1.62e-10!6;CL:0000898!1.62e-10!6;CL:0000809!1.62e-10!6;CL:0000810!1.62e-10!6;CL:0000895!1.62e-10!6;CL:0000808!1.62e-10!6;CL:0000894!1.62e-10!6;CL:0000806!1.62e-10!6;CL:0000807!1.62e-10!6;CL:0000805!1.62e-10!6;CL:0002425!1.62e-10!6;CL:0002436!1.62e-10!6;CL:0002427!1.62e-10!6;CL:0002428!1.62e-10!6;CL:0002429!1.62e-10!6;CL:0002433!1.62e-10!6;CL:0002431!1.62e-10!6;CL:0002432!1.62e-10!6;CL:0000791!2.40e-10!9;CL:0000789!2.40e-10!9;CL:0002420!2.40e-10!9;CL:0002419!2.40e-10!9;CL:0000790!2.40e-10!9;CL:0000084!2.02e-08!11;CL:0000827!2.02e-08!11;CL:0000838!1.07e-07!12;CL:0000542!4.36e-07!13;CL:0000051!4.36e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.72e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!8.08e-13!3;DOID:4045!8.08e-13!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.86e-38,3;DOID:4045,8.86e-38,3;DOID:0050686,2.44e-19,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.72e-13,9;UBERON:0002036,3.72e-13,9;UBERON:0002385,3.72e-13,9;UBERON:0000486,3.72e-13,9;UBERON:0007503,3.72e-13,9;UBERON:0001015,3.72e-13,9;UBERON:0002329,3.72e-13,9;UBERON:0003082,3.72e-13,9;UBERON:0003059,3.72e-13,9;UBERON:0007282,3.72e-13,9;UBERON:0004290,3.72e-13,9;UBERON:0009618,3.72e-13,9;UBERON:0000383,6.49e-12,10;UBERON:0007524,6.77e-11,11;UBERON:0003077,6.77e-11,11;UBERON:0007285,6.77e-11,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0.234064526321993,1.54096171402954,0.558405112967355,0,0.437102012094987,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,3.1253413780952,3.14114246384279,11.7646297606203,8.87959130445979,7.76816564849846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.339956859987711,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ENSMUST00000136927,p5@uc007maq.1 | |||
}} |
Revision as of 18:35, 12 September 2013
Short description: | p5@ENSMUST00000136927, p5@uc007maq.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_ENSMUST00000136927_5end, CAGE_peak_5_at_uc007maq.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -34bp_to_ENSMUST00000136927, uc007maq.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.72e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.72e-13 | 9 |
striated muscle tissue | 3.72e-13 | 9 |
muscle tissue | 3.72e-13 | 9 |
multilaminar epithelium | 3.72e-13 | 9 |
epithelial vesicle | 3.72e-13 | 9 |
musculature | 3.72e-13 | 9 |
somite | 3.72e-13 | 9 |
myotome | 3.72e-13 | 9 |
presomitic mesoderm | 3.72e-13 | 9 |
presumptive segmental plate | 3.72e-13 | 9 |
dermomyotome | 3.72e-13 | 9 |
trunk paraxial mesoderm | 3.72e-13 | 9 |
musculature of body | 6.49e-12 | 10 |
dense mesenchyme tissue | 6.77e-11 | 11 |
paraxial mesoderm | 6.77e-11 | 11 |
presumptive paraxial mesoderm | 6.77e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.86e-38 | 3 |
muscle cancer | 8.86e-38 | 3 |
organ system cancer | 2.44e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.