FFCP PHASE1:Mm9::chr19:22213518..22213545,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226025|HGNC=|UniProt=Q5F4S6,Q5F4T0,Q69ZE8,Q5F4S8,Q5F4S9,Q5F4S7|association_with_transcript=-61bp_to_NM_001035239,NM_001035240,NM_001035241,NM_001035242,NM_001035243,uc008gzj.1,uc008gzk.1,uc008gzl.1,uc008gzm.1,uc008gzn.1_5end|description=CAGE_peak_6_at_Trpm3_5end|id=chr19:22213518..22213545,+|ontology_enrichment_celltype=CL:0000117!5.51e-12!23;CL:0000337!5.51e-12!23;CL:0000540!2.04e-08!33;CL:0000047!2.04e-08!33;CL:0000031!2.04e-08!33;CL:0000404!2.04e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,7.16e-12,23;CL:0000337,7.16e-12,23;CL:0000540,2.56e-07,33;CL:0000047,2.56e-07,33;CL:0000031,2.56e-07,33;CL:0000404,2.56e-07,33;CL:0002610,6.95e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!9.83e-23!52;UBERON:0005068!9.83e-23!52;UBERON:0006241!9.83e-23!52;UBERON:0007135!9.83e-23!52;UBERON:0001017!4.63e-22!73;UBERON:0005743!4.63e-22!73;UBERON:0000955!1.70e-21!50;UBERON:0006238!1.70e-21!50;UBERON:0000073!7.15e-21!75;UBERON:0001016!7.15e-21!75;UBERON:0002616!8.92e-21!49;UBERON:0003080!5.04e-17!40;UBERON:0000033!2.52e-16!63;UBERON:0002780!3.60e-16!39;UBERON:0001890!3.60e-16!39;UBERON:0006240!3.60e-16!39;UBERON:0002346!5.38e-15!71;UBERON:0003075!5.38e-15!71;UBERON:0007284!5.38e-15!71;UBERON:0003056!2.16e-13!49;UBERON:0004121!7.34e-13!102;UBERON:0000924!7.34e-13!102;UBERON:0006601!7.34e-13!102;UBERON:0002020!2.93e-12!34;UBERON:0002791!3.85e-09!29;UBERON:0003528!3.85e-09!29;UBERON:0001893!3.85e-09!29;UBERON:0001894!5.23e-09!10;UBERON:0006222!5.23e-09!10;UBERON:0007811!9.52e-09!86;UBERON:0000025!1.78e-07!114;UBERON:0000007!2.81e-07!8;UBERON:0003296!2.81e-07!8;UBERON:0010133!2.81e-07!8;UBERON:0000153!3.57e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-32,54;UBERON:0001017,1.98e-30,73;UBERON:0001016,2.30e-29,75;UBERON:0001049,1.01e-28,52;UBERON:0005068,1.01e-28,52;UBERON:0006241,1.01e-28,52;UBERON:0007135,1.01e-28,52;UBERON:0000955,1.34e-23,47;UBERON:0006238,1.34e-23,47;UBERON:0002616,2.57e-22,46;UBERON:0002346,8.52e-22,64;UBERON:0003075,8.52e-22,64;UBERON:0007284,8.52e-22,64;UBERON:0004121,3.56e-21,95;UBERON:0000924,3.56e-21,95;UBERON:0006601,3.56e-21,95;UBERON:0003080,1.67e-18,40;UBERON:0010371,4.18e-18,73;UBERON:0002780,4.91e-17,39;UBERON:0001890,4.91e-17,39;UBERON:0006240,4.91e-17,39;UBERON:0001894,7.35e-15,10;UBERON:0006222,7.35e-15,10;UBERON:0003056,5.13e-14,49;UBERON:0010314,9.68e-14,92;UBERON:0000007,3.25e-11,8;UBERON:0003296,3.25e-11,8;UBERON:0010133,3.25e-11,8;UBERON:0003076,4.64e-11,12;UBERON:0003057,4.64e-11,12;UBERON:0002020,1.36e-10,34;UBERON:0000025,1.54e-09,114;UBERON:0004111,2.11e-08,122;UBERON:0002240,7.31e-08,6;UBERON:0005174,7.31e-08,6;UBERON:0001137,7.31e-08,6;UBERON:0003528,5.76e-07,29;UBERON:0002791,5.76e-07,29;UBERON:0001893,5.76e-07,29;UBERON:0004684,6.95e-07,3;UBERON:0002275,6.95e-07,3|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,0.518448061542388,0,0.210324961351382,1.42825492201902,3.09215957332259,0.61245399607477,0.670918297127655,0,6.60695285996332,3.44755812830007,4.14737639791857,0.791317726381163,2.28719109006024,0.52091337055676,0.279182999001381,7.87867654044352,7.33431589328689,2.35702868378934,3.70166370077668,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,7.18995069143149,5.03250663100489,1.38219787324151,3.12883776346098,3.3243009452943,4.36354893575076,7.62533936418461,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,1.2604344302271,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,0,0.583826711835847,0,0.164167464079095,0.0810688095458557,0,0,0,6.9395683026162,1.9551876352064,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,2.56880943980467,1.64096361229084,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,1.92792789853084,0.141940085208269,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,9.19186935535228,1.08036656418786,0.905510786479282,3.85806663056866,6.91626911204867,5.17269571046005,3.29098041204242,1.2178597964584,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,3.0215755895588,1.35004500046361,0,1.81256963593682,2.07104124700728,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.23621034343337,0.962757628775446,0.252697211763798,1.2673964994512,1.13175804831646,0.936415074698824,0.384150914429216,0.631790158511746,0.476293691283074,0.347652977834566,0.578727661391115,1.64834360321323,0.883193520806384,1.37147700954166,1.06485483695602,0.238436189947321,0.290692833264657,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.492522411877817,2.04615521584845,0.154936841185966,0.385813221962283,0.499621155875892,1.63752125911786,1.07435527024149,0.191288332068843,0,0|short_description=p6@Trpm3}} | ||
|EntrezGene=226025 | |||
|HGNC= | |||
|UniProt=Q5F4S6,Q5F4T0,Q69ZE8,Q5F4S8,Q5F4S9,Q5F4S7 | |||
|association_with_transcript=-61bp_to_NM_001035239,NM_001035240,NM_001035241,NM_001035242,NM_001035243,uc008gzj.1,uc008gzk.1,uc008gzl.1,uc008gzm.1,uc008gzn.1_5end | |||
|description=CAGE_peak_6_at_Trpm3_5end | |||
|id=chr19:22213518..22213545,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.51e-12!23;CL:0000337!5.51e-12!23;CL:0000540!2.04e-08!33;CL:0000047!2.04e-08!33;CL:0000031!2.04e-08!33;CL:0000404!2.04e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.16e-12,23;CL:0000337,7.16e-12,23;CL:0000540,2.56e-07,33;CL:0000047,2.56e-07,33;CL:0000031,2.56e-07,33;CL:0000404,2.56e-07,33;CL:0002610,6.95e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.83e-23!52;UBERON:0005068!9.83e-23!52;UBERON:0006241!9.83e-23!52;UBERON:0007135!9.83e-23!52;UBERON:0001017!4.63e-22!73;UBERON:0005743!4.63e-22!73;UBERON:0000955!1.70e-21!50;UBERON:0006238!1.70e-21!50;UBERON:0000073!7.15e-21!75;UBERON:0001016!7.15e-21!75;UBERON:0002616!8.92e-21!49;UBERON:0003080!5.04e-17!40;UBERON:0000033!2.52e-16!63;UBERON:0002780!3.60e-16!39;UBERON:0001890!3.60e-16!39;UBERON:0006240!3.60e-16!39;UBERON:0002346!5.38e-15!71;UBERON:0003075!5.38e-15!71;UBERON:0007284!5.38e-15!71;UBERON:0003056!2.16e-13!49;UBERON:0004121!7.34e-13!102;UBERON:0000924!7.34e-13!102;UBERON:0006601!7.34e-13!102;UBERON:0002020!2.93e-12!34;UBERON:0002791!3.85e-09!29;UBERON:0003528!3.85e-09!29;UBERON:0001893!3.85e-09!29;UBERON:0001894!5.23e-09!10;UBERON:0006222!5.23e-09!10;UBERON:0007811!9.52e-09!86;UBERON:0000025!1.78e-07!114;UBERON:0000007!2.81e-07!8;UBERON:0003296!2.81e-07!8;UBERON:0010133!2.81e-07!8;UBERON:0000153!3.57e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.97e-32,54;UBERON:0001017,1.98e-30,73;UBERON:0001016,2.30e-29,75;UBERON:0001049,1.01e-28,52;UBERON:0005068,1.01e-28,52;UBERON:0006241,1.01e-28,52;UBERON:0007135,1.01e-28,52;UBERON:0000955,1.34e-23,47;UBERON:0006238,1.34e-23,47;UBERON:0002616,2.57e-22,46;UBERON:0002346,8.52e-22,64;UBERON:0003075,8.52e-22,64;UBERON:0007284,8.52e-22,64;UBERON:0004121,3.56e-21,95;UBERON:0000924,3.56e-21,95;UBERON:0006601,3.56e-21,95;UBERON:0003080,1.67e-18,40;UBERON:0010371,4.18e-18,73;UBERON:0002780,4.91e-17,39;UBERON:0001890,4.91e-17,39;UBERON:0006240,4.91e-17,39;UBERON:0001894,7.35e-15,10;UBERON:0006222,7.35e-15,10;UBERON:0003056,5.13e-14,49;UBERON:0010314,9.68e-14,92;UBERON:0000007,3.25e-11,8;UBERON:0003296,3.25e-11,8;UBERON:0010133,3.25e-11,8;UBERON:0003076,4.64e-11,12;UBERON:0003057,4.64e-11,12;UBERON:0002020,1.36e-10,34;UBERON:0000025,1.54e-09,114;UBERON:0004111,2.11e-08,122;UBERON:0002240,7.31e-08,6;UBERON:0005174,7.31e-08,6;UBERON:0001137,7.31e-08,6;UBERON:0003528,5.76e-07,29;UBERON:0002791,5.76e-07,29;UBERON:0001893,5.76e-07,29;UBERON:0004684,6.95e-07,3;UBERON:0002275,6.95e-07,3 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42779753031517,3.70293685490423,4.43681982454325,0,0,0,0,0,0,0,0.518448061542388,0,0.210324961351382,1.42825492201902,3.09215957332259,0.61245399607477,0.670918297127655,0,6.60695285996332,3.44755812830007,4.14737639791857,0.791317726381163,2.28719109006024,0.52091337055676,0.279182999001381,7.87867654044352,7.33431589328689,2.35702868378934,3.70166370077668,0.931997229126503,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0.11418387971906,0,0,0,0.304465478312141,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.75668478206928,2.30391377494801,0,0,0,0,7.18995069143149,5.03250663100489,1.38219787324151,3.12883776346098,3.3243009452943,4.36354893575076,7.62533936418461,0,0,0,0,0,0,0,0,0.136072998302656,0.2562274405697,0.0937017245597288,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0.621377317606506,0.938104239924385,1.2604344302271,0.946978942340841,0.590292695242212,0.771335564436891,0.697601834251224,0,0.583826711835847,0,0.164167464079095,0.0810688095458557,0,0,0,6.9395683026162,1.9551876352064,0.330418782983798,0,0,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0.198956472041151,0,0.898819408654221,0,0.398282546508734,0,0,0,0.407302655690628,0,0,0,0,0,0,0,0.500535317148282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0,0,0,0,0.54390568381871,0,0,2.56880943980467,1.64096361229084,0,0,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,1.92792789853084,0.141940085208269,0,0.325773918707152,0,0,0.242780636154981,0,0,0,0.307435147943927,0.516856586336442,0,0.356497378384721,0,0,0,9.19186935535228,1.08036656418786,0.905510786479282,3.85806663056866,6.91626911204867,5.17269571046005,3.29098041204242,1.2178597964584,0,0.21183207086382,0,0,0,0,0,0.164140899745061,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.404593039154462,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0.920650473014354,0,0.515559547031063,0.685082519770642,3.0215755895588,1.35004500046361,0,1.81256963593682,2.07104124700728,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.419226325255965,0.183843508450014,0.888986911206461,1.23621034343337,0.962757628775446,0.252697211763798,1.2673964994512,1.13175804831646,0.936415074698824,0.384150914429216,0.631790158511746,0.476293691283074,0.347652977834566,0.578727661391115,1.64834360321323,0.883193520806384,1.37147700954166,1.06485483695602,0.238436189947321,0.290692833264657,0.846984423737976,0.761531471025089,0.365855945745545,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.492522411877817,2.04615521584845,0.154936841185966,0.385813221962283,0.499621155875892,1.63752125911786,1.07435527024149,0.191288332068843,0,0 | |||
|short_description=p6@Trpm3 | |||
}} |
Revision as of 17:11, 13 September 2013
Short description: | p6@Trpm3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Trpm3_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_NM_001035239, NM_001035240, NM_001035241, NM_001035242, NM_001035243, uc008gzj.1, uc008gzk.1, uc008gzl.1, uc008gzm.1, uc008gzn.1_5end |
EntrezGene: | Trpm3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.16e-12 | 23 |
neuroblast (sensu Vertebrata) | 7.16e-12 | 23 |
neuron | 2.56e-07 | 33 |
neuronal stem cell | 2.56e-07 | 33 |
neuroblast | 2.56e-07 | 33 |
electrically signaling cell | 2.56e-07 | 33 |
raphe nuclei neuron | 6.95e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.