FFCP PHASE1:Mm9::chr11:79436622..79436627,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=790912|HGNC=|MCL_coexpression_id=6|UniProt=|association_with_transcript=37bp_to_ENSMUST00000145652,NR_003283,uc007kkv.1_5end|description=CAGE_peak_1_at_Gm11202_5end|id=chr11:79436622..79436627,-|ontology_enrichment_celltype=CL:0002320!1.09e-13!46;CL:0000134!1.09e-13!46;CL:0000988!2.68e-12!32;CL:0002032!2.68e-12!32;CL:0000037!2.68e-12!32;CL:0000566!2.68e-12!32;CL:0000837!2.68e-12!32;CL:0000219!4.99e-11!54;CL:0000893!4.29e-10!6;CL:0002489!4.29e-10!6;CL:0000898!4.29e-10!6;CL:0000809!4.29e-10!6;CL:0000810!4.29e-10!6;CL:0000895!4.29e-10!6;CL:0000808!4.29e-10!6;CL:0000894!4.29e-10!6;CL:0000806!4.29e-10!6;CL:0000807!4.29e-10!6;CL:0000805!4.29e-10!6;CL:0002425!4.29e-10!6;CL:0002436!4.29e-10!6;CL:0002427!4.29e-10!6;CL:0002428!4.29e-10!6;CL:0002429!4.29e-10!6;CL:0002433!4.29e-10!6;CL:0002431!4.29e-10!6;CL:0002432!4.29e-10!6;CL:0000063!2.39e-09!66;CL:0000791!3.27e-09!9;CL:0000789!3.27e-09!9;CL:0002420!3.27e-09!9;CL:0002419!3.27e-09!9;CL:0000790!3.27e-09!9;CL:0000838!4.37e-09!12;CL:0002092!1.71e-08!3;CL:0002540!1.71e-08!3;CL:0000542!2.62e-08!13;CL:0000051!2.62e-08!13;CL:0002031!3.63e-08!25;CL:0000738!4.50e-08!17;CL:0002087!4.50e-08!17;CL:0000034!1.36e-07!97;CL:0000723!1.52e-07!91;CL:0000048!1.52e-07!91;CL:0000624!1.78e-07!8;CL:0000084!2.08e-07!11;CL:0000827!2.08e-07!11|ontology_enrichment_celltype_v019_2=CL:0000355,1.66e-11,9|ontology_enrichment_disease=DOID:0050686!2.82e-11!6;DOID:0060100!6.79e-09!3;DOID:4045!6.79e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,5.97e-33,3;DOID:4045,5.97e-33,3;DOID:0050686,2.03e-29,6|ontology_enrichment_uberon=UBERON:0002384!1.09e-13!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.66e-11,9;UBERON:0002036,1.66e-11,9;UBERON:0002385,1.66e-11,9;UBERON:0000486,1.66e-11,9;UBERON:0007503,1.66e-11,9;UBERON:0001015,1.66e-11,9;UBERON:0002329,1.66e-11,9;UBERON:0003082,1.66e-11,9;UBERON:0003059,1.66e-11,9;UBERON:0007282,1.66e-11,9;UBERON:0004290,1.66e-11,9;UBERON:0009618,1.66e-11,9;UBERON:0000383,2.01e-10,10;UBERON:0007524,1.56e-09,11;UBERON:0003077,1.56e-09,11;UBERON:0007285,1.56e-09,11;UBERON:0002204,1.05e-08,32|phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0.468129052643987,0.34243593645101,0.319088635981346,0.684802919724823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,3.69038872550742,0,0,0,0,2.09265815368454,1.5626706890476,1.0470474879476,24.7057224973026,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@Gm11202}} | ||
|EntrezGene=790912 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENSMUST00000145652,NR_003283,uc007kkv.1_5end | |||
|description=CAGE_peak_1_at_Gm11202_5end | |||
|id=chr11:79436622..79436627,- | |||
|ontology_enrichment_celltype=CL:0002320!1.09e-13!46;CL:0000134!1.09e-13!46;CL:0000988!2.68e-12!32;CL:0002032!2.68e-12!32;CL:0000037!2.68e-12!32;CL:0000566!2.68e-12!32;CL:0000837!2.68e-12!32;CL:0000219!4.99e-11!54;CL:0000893!4.29e-10!6;CL:0002489!4.29e-10!6;CL:0000898!4.29e-10!6;CL:0000809!4.29e-10!6;CL:0000810!4.29e-10!6;CL:0000895!4.29e-10!6;CL:0000808!4.29e-10!6;CL:0000894!4.29e-10!6;CL:0000806!4.29e-10!6;CL:0000807!4.29e-10!6;CL:0000805!4.29e-10!6;CL:0002425!4.29e-10!6;CL:0002436!4.29e-10!6;CL:0002427!4.29e-10!6;CL:0002428!4.29e-10!6;CL:0002429!4.29e-10!6;CL:0002433!4.29e-10!6;CL:0002431!4.29e-10!6;CL:0002432!4.29e-10!6;CL:0000063!2.39e-09!66;CL:0000791!3.27e-09!9;CL:0000789!3.27e-09!9;CL:0002420!3.27e-09!9;CL:0002419!3.27e-09!9;CL:0000790!3.27e-09!9;CL:0000838!4.37e-09!12;CL:0002092!1.71e-08!3;CL:0002540!1.71e-08!3;CL:0000542!2.62e-08!13;CL:0000051!2.62e-08!13;CL:0002031!3.63e-08!25;CL:0000738!4.50e-08!17;CL:0002087!4.50e-08!17;CL:0000034!1.36e-07!97;CL:0000723!1.52e-07!91;CL:0000048!1.52e-07!91;CL:0000624!1.78e-07!8;CL:0000084!2.08e-07!11;CL:0000827!2.08e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.66e-11,9 | |||
|ontology_enrichment_disease=DOID:0050686!2.82e-11!6;DOID:0060100!6.79e-09!3;DOID:4045!6.79e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.97e-33,3;DOID:4045,5.97e-33,3;DOID:0050686,2.03e-29,6 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.09e-13!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.66e-11,9;UBERON:0002036,1.66e-11,9;UBERON:0002385,1.66e-11,9;UBERON:0000486,1.66e-11,9;UBERON:0007503,1.66e-11,9;UBERON:0001015,1.66e-11,9;UBERON:0002329,1.66e-11,9;UBERON:0003082,1.66e-11,9;UBERON:0003059,1.66e-11,9;UBERON:0007282,1.66e-11,9;UBERON:0004290,1.66e-11,9;UBERON:0009618,1.66e-11,9;UBERON:0000383,2.01e-10,10;UBERON:0007524,1.56e-09,11;UBERON:0003077,1.56e-09,11;UBERON:0007285,1.56e-09,11;UBERON:0002204,1.05e-08,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.84473233291,0.468129052643987,0.34243593645101,0.319088635981346,0.684802919724823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0.635030673459631,3.69038872550742,0,0,0,0,2.09265815368454,1.5626706890476,1.0470474879476,24.7057224973026,1.36609096991689,0.485510353031154,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0.336093799142464,0,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,2.1314403448383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.762421362438388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51469581422943,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0,0,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136694227721025,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0.263069711437843,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Gm11202 | |||
}} |
Revision as of 21:06, 12 September 2013
Short description: | p1@Gm11202 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm11202_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 37bp_to_ENSMUST00000145652, NR_003283, uc007kkv.1_5end |
EntrezGene: | Gm11202 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.66e-11 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.66e-11 | 9 |
striated muscle tissue | 1.66e-11 | 9 |
muscle tissue | 1.66e-11 | 9 |
multilaminar epithelium | 1.66e-11 | 9 |
epithelial vesicle | 1.66e-11 | 9 |
musculature | 1.66e-11 | 9 |
somite | 1.66e-11 | 9 |
myotome | 1.66e-11 | 9 |
presomitic mesoderm | 1.66e-11 | 9 |
presumptive segmental plate | 1.66e-11 | 9 |
dermomyotome | 1.66e-11 | 9 |
trunk paraxial mesoderm | 1.66e-11 | 9 |
musculature of body | 2.01e-10 | 10 |
dense mesenchyme tissue | 1.56e-09 | 11 |
paraxial mesoderm | 1.56e-09 | 11 |
presumptive paraxial mesoderm | 1.56e-09 | 11 |
musculoskeletal system | 1.05e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.97e-33 | 3 |
muscle cancer | 5.97e-33 | 3 |
organ system cancer | 2.03e-29 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.