FFCP PHASE1:Mm9::chr15:74787580..74787590,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=404|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:74787580..74787590,+|id=chr15:74787580..74787590,+|ontology_enrichment_celltype=CL:0000049!9.47e-10!19;CL:0000988!1.65e-07!32;CL:0002032!1.65e-07!32;CL:0000037!1.65e-07!32;CL:0000566!1.65e-07!32;CL:0000837!1.65e-07!32;CL:0002320!2.77e-07!46;CL:0000134!2.77e-07!46;CL:0000763!3.55e-07!16|ontology_enrichment_celltype_v019_2=CL:0000049,5.09e-21,19;CL:0002320,7.92e-17,46;CL:0000134,7.92e-17,46;CL:0000988,1.18e-16,32;CL:0002032,1.18e-16,32;CL:0000037,1.18e-16,32;CL:0000837,1.18e-16,32;CL:0000219,7.26e-14,54;CL:0000763,1.40e-13,16;CL:0000839,1.26e-09,13;CL:0000723,4.05e-09,91;CL:0000048,4.05e-09,91;CL:0000557,7.51e-09,7;CL:0002476,1.07e-08,2;CL:0000034,2.46e-08,97;CL:0002031,3.16e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!2.77e-21!70;UBERON:0002193!2.78e-18!48;UBERON:0002390!2.89e-17!45;UBERON:0003061!2.89e-17!45;UBERON:0005057!3.57e-11!51;UBERON:0002371!1.80e-10!16;UBERON:0004177!2.52e-08!29;UBERON:0001474!2.59e-07!22;UBERON:0004765!2.59e-07!22;UBERON:0001434!2.59e-07!22;UBERON:0002384!2.77e-07!46;UBERON:0000926!6.19e-07!193;UBERON:0004120!6.19e-07!193;UBERON:0006603!6.19e-07!193;UBERON:0000077!7.04e-07!97;UBERON:0001041!8.41e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-17,16;UBERON:0002384,7.92e-17,46;UBERON:0001474,4.40e-12,22;UBERON:0004765,4.40e-12,22;UBERON:0001434,4.40e-12,22;UBERON:0002204,1.45e-11,32;UBERON:0002193,3.07e-10,48;UBERON:0002405,3.07e-10,48;UBERON:0002390,3.04e-09,45;UBERON:0003061,3.04e-09,45;UBERON:0001155,8.21e-08,2;UBERON:0000059,8.21e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0,0.666219523631325,0.809901069559304,0,2.99689057090326,2.05671650408608,2.54633791078818,0.0850432901510698,0.595745707205312,2.08959831311148,0.47997726838022,0,0,0,0,0,0,0,0,1.23012957516914,0,0.288851619751275,0,0,1.25559489221072,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,0.11418387971906,11.9111426477699,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0.86759614151947,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,1.67741174308288,1.79970819298022,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.83082697826187,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0,1.10851914099963,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,3.01582567878545,7.07077388964322,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.98931751764888,0,0,0,0,0,0,2.39219233116994,0.412773735926445,0.185194527369712,0.188368457004691,1.23024804948923,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.605798699688886,0.228620419965,0.705783295957884,1.16949456887703,0.865906574762965,0.233753804363138,0,0,0,0,0.19318959403219,0.563047426353546,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p@chr15:74787580..74787590,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=404 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:74787580..74787590,+ | |||
|id=chr15:74787580..74787590,+ | |||
|ontology_enrichment_celltype=CL:0000049!9.47e-10!19;CL:0000988!1.65e-07!32;CL:0002032!1.65e-07!32;CL:0000037!1.65e-07!32;CL:0000566!1.65e-07!32;CL:0000837!1.65e-07!32;CL:0002320!2.77e-07!46;CL:0000134!2.77e-07!46;CL:0000763!3.55e-07!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,5.09e-21,19;CL:0002320,7.92e-17,46;CL:0000134,7.92e-17,46;CL:0000988,1.18e-16,32;CL:0002032,1.18e-16,32;CL:0000037,1.18e-16,32;CL:0000837,1.18e-16,32;CL:0000219,7.26e-14,54;CL:0000763,1.40e-13,16;CL:0000839,1.26e-09,13;CL:0000723,4.05e-09,91;CL:0000048,4.05e-09,91;CL:0000557,7.51e-09,7;CL:0002476,1.07e-08,2;CL:0000034,2.46e-08,97;CL:0002031,3.16e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!2.77e-21!70;UBERON:0002193!2.78e-18!48;UBERON:0002390!2.89e-17!45;UBERON:0003061!2.89e-17!45;UBERON:0005057!3.57e-11!51;UBERON:0002371!1.80e-10!16;UBERON:0004177!2.52e-08!29;UBERON:0001474!2.59e-07!22;UBERON:0004765!2.59e-07!22;UBERON:0001434!2.59e-07!22;UBERON:0002384!2.77e-07!46;UBERON:0000926!6.19e-07!193;UBERON:0004120!6.19e-07!193;UBERON:0006603!6.19e-07!193;UBERON:0000077!7.04e-07!97;UBERON:0001041!8.41e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.49e-17,16;UBERON:0002384,7.92e-17,46;UBERON:0001474,4.40e-12,22;UBERON:0004765,4.40e-12,22;UBERON:0001434,4.40e-12,22;UBERON:0002204,1.45e-11,32;UBERON:0002193,3.07e-10,48;UBERON:0002405,3.07e-10,48;UBERON:0002390,3.04e-09,45;UBERON:0003061,3.04e-09,45;UBERON:0001155,8.21e-08,2;UBERON:0000059,8.21e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.342401459862411,0,0.666219523631325,0.809901069559304,0,2.99689057090326,2.05671650408608,2.54633791078818,0.0850432901510698,0.595745707205312,2.08959831311148,0.47997726838022,0,0,0,0,0,0,0,0,1.23012957516914,0,0.288851619751275,0,0,1.25559489221072,0,1.0470474879476,0,0,0,0,0,0,0,0,0,0,0,0,2.85230430298152,0,0,0,0,0,0,0,0,0,0,1.3498495759221,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.216491041011214,0,1.01104889002957,0.11418387971906,11.9111426477699,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0,0,0.86759614151947,0,0,0.220841518460394,0,1.86391761218122,0,0,1.78819938646014,1.67741174308288,1.79970819298022,1.90605340609597,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0.631325567659422,0,0,0,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,2.83082697826187,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0,0,0,0.246794327843601,0.592905254174298,0,0.196558995113203,0,0,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.757736633841335,0.538192240565737,0,1.10851914099963,0,0,0,0.234690248288502,0,0,0,0.315270288212382,0,0,0.163863314715738,0.345369963731791,0.289298117163023,3.01582567878545,7.07077388964322,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.659880491890142,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0.98931751764888,0,0,0,0,0,0,2.39219233116994,0.412773735926445,0.185194527369712,0.188368457004691,1.23024804948923,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0.436725127492355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0.202725215290164,0.205421914329655,0.25984164595559,0.179026695667481,0.39736270956253,0.240390899039938,0.443068581523732,0.605798699688886,0.228620419965,0.705783295957884,1.16949456887703,0.865906574762965,0.233753804363138,0,0,0,0,0.19318959403219,0.563047426353546,0.73260649706906,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0.476293691283074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p@chr15:74787580..74787590,+ | |||
}} |
Revision as of 10:53, 13 September 2013
Short description: | p@chr15:74787580..74787590, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:74787580..74787590, + |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 5.09e-21 | 19 |
connective tissue cell | 7.92e-17 | 46 |
mesenchymal cell | 7.92e-17 | 46 |
hematopoietic cell | 1.18e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.18e-16 | 32 |
hematopoietic stem cell | 1.18e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.18e-16 | 32 |
motile cell | 7.26e-14 | 54 |
myeloid cell | 1.40e-13 | 16 |
myeloid lineage restricted progenitor cell | 1.26e-09 | 13 |
somatic stem cell | 4.05e-09 | 91 |
multi fate stem cell | 4.05e-09 | 91 |
granulocyte monocyte progenitor cell | 7.51e-09 | 7 |
bone marrow macrophage | 1.07e-08 | 2 |
stem cell | 2.46e-08 | 97 |
hematopoietic lineage restricted progenitor cell | 3.16e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.49e-17 | 16 |
connective tissue | 7.92e-17 | 46 |
bone element | 4.40e-12 | 22 |
skeletal element | 4.40e-12 | 22 |
skeletal system | 4.40e-12 | 22 |
musculoskeletal system | 1.45e-11 | 32 |
hemolymphoid system | 3.07e-10 | 48 |
immune system | 3.07e-10 | 48 |
hematopoietic system | 3.04e-09 | 45 |
blood island | 3.04e-09 | 45 |
colon | 8.21e-08 | 2 |
large intestine | 8.21e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.