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FFCP PHASE1:Mm9::chr1:55084221..55084250,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=81898|HGNC=|MCL_coexpression_id=298|UniProt=G5E866,Q3US00,Q8C2Y9,Q8C839,Q99NB9,A0JLN0|association_with_transcript=71bp_to_ENSMUST00000027127,NM_031179,uc007azx.1,uc007azy.1_5end|description=CAGE_peak_1_at_Sf3b1_5end|id=chr1:55084221..55084250,-|ontology_enrichment_celltype=CL:0000542!1.43e-07!13;CL:0000051!1.43e-07!13;CL:0000838!2.30e-07!12;CL:0000084!8.84e-07!11;CL:0000827!8.84e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,1.43e-07,13;CL:0000051,1.43e-07,13;CL:0000838,2.30e-07,12;CL:0000084,8.84e-07,11;CL:0000827,8.84e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.55e-08!29;UBERON:0000065!7.40e-08!41;UBERON:0001004!1.37e-07!42;UBERON:0001048!3.29e-07!147;UBERON:0002370!5.05e-07!23;UBERON:0000974!5.05e-07!23;UBERON:0004807!5.05e-07!23;UBERON:0005058!5.05e-07!23;UBERON:0003351!5.05e-07!23;UBERON:0009113!5.05e-07!23;UBERON:0003295!5.05e-07!23;UBERON:0009722!5.05e-07!23;UBERON:0005562!5.05e-07!23;UBERON:0007690!5.05e-07!23;UBERON:0003081!5.83e-07!88;UBERON:0000926!7.21e-07!193;UBERON:0004120!7.21e-07!193;UBERON:0006603!7.21e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.91e-09,43;UBERON:0004177,1.55e-08,29;UBERON:0005057,1.55e-08,29;UBERON:0000065,7.40e-08,41;UBERON:0001048,1.30e-07,134;UBERON:0001004,1.37e-07,42;UBERON:0000926,2.34e-07,120;UBERON:0004120,2.34e-07,120;UBERON:0006603,2.34e-07,120;UBERON:0007811,3.56e-07,36;UBERON:0000077,3.85e-07,35;UBERON:0002370,5.05e-07,23;UBERON:0000974,5.05e-07,23;UBERON:0004807,5.05e-07,23;UBERON:0005058,5.05e-07,23;UBERON:0003351,5.05e-07,23;UBERON:0009113,5.05e-07,23;UBERON:0003295,5.05e-07,23;UBERON:0009722,5.05e-07,23;UBERON:0005562,5.05e-07,23;UBERON:0007690,5.05e-07,23|phase1_expression=155.184232844545,90.3846305785945,67.7948866690409,63.5174843744343,65.1164448930251,96.1948228055129,76.6249461153324,241.073244865423,413.496476959445,326.988143271825,152.72642765715,164.88905264336,275.633175189241,290.672838043166,72.2848183139988,113.386149738303,93.7412916691716,233.599733447775,219.108864901971,167.633912460222,97.9698702540324,147.447062533315,126.159498154106,102.075165742193,86.0284804001888,68.9078356938024,70.2142053739292,81.663597187952,69.9286183599456,101.820172423012,76.4970261760801,44.4521471421742,58.4311548205342,15.8481681015439,103.697731490708,78.4627526092084,95.7554280870511,251.537510072882,218.773896466664,269.091204402532,256.468928781522,254.092920404542,258.777018165605,116.454556627409,116.076586246344,118.204108392123,25.8189143634853,10.6832326626419,7.46933021297204,17.1098311185369,12.1788186814065,7.18762821824858,217.110692238711,150.87532553836,187.204246122352,71.0036043459214,81.9485638224844,65.4903557192352,46.5327859977075,51.3121249893872,25.3532561402472,15.9256930072492,7.11435836888911,15.7482450524245,12.8552627133707,15.6305625288142,7.19040265244171,14.9845139075406,104.933887656179,50.4922209360523,64.7800880962257,30.2790043468032,37.5476519617743,94.6853877931595,65.4624567054554,34.0110951045708,34.1359231098105,87.4658265883536,84.7908063574464,49.7211304742831,56.9968019643012,66.1559980607085,38.5272538621906,79.9122906244986,73.190360685092,65.4075459751542,108.060105726519,79.0333650299275,96.5508964998097,89.7790134068612,164.353165093851,55.9275520037901,38.078394687634,60.4467574634355,59.7794304051856,56.4513877742643,84.2666520790511,132.424360643151,82.8717354683151,68.547877455006,120.702810748615,127.043212640175,68.7974147207943,35.5533351576666,51.0918856786465,59.7929282521233,36.3977600410644,100.253446393335,307.100330005546,89.5106098560893,86.3956927295357,66.9824052286711,72.1826506411463,91.4886428154419,143.340633998424,96.7632753238501,102.091521674296,111.630703542172,80.4995602274386,120.354536360872,128.750605262409,135.280195624727,89.4680453846986,129.409112279104,157.713370230532,93.4972822063445,196.137358816191,100.783658806892,182.981126985213,82.6844329514621,82.8076091101714,133.444921943862,100.991930031713,127.857728665165,94.3357722300403,114.542331725837,156.221584146385,144.560899848928,121.812369565031,93.6466258694809,132.722851821958,85.7534849536854,122.262186137832,138.497727591022,168.118189402931,178.462412356796,142.614024779907,110.207635934821,115.544444212003,165.278714066674,156.596500505914,124.283980286435,148.755278335695,133.38057977799,135.404645756427,124.595451028377,113.758536344744,126.357822393325,137.535133707467,104.391389357893,104.598622751569,121.361829424724,120.029580941702,114.910311340484,120.482615165042,121.382719159713,116.430656207435,161.486468493795,138.559393627151,145.780708102237,129.30475122564,102.778591160009,99.895302457428,119.980538371772,104.303814487807,174.526222595266,105.403591771832,73.2528069658018,137.357633344691,143.290026537891,127.321051786228,114.556241986059,105.184814738624,83.8895011156386,114.361503832227,89.1021345056899,104.304111652112,126.934229162254,125.361908017594,105.161870812544,110.230405436094,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|EntrezGene=81898
|HGNC=
|MCL_coexpression_id=298
|UniProt=G5E866,Q3US00,Q8C2Y9,Q8C839,Q99NB9,A0JLN0
|association_with_transcript=71bp_to_ENSMUST00000027127,NM_031179,uc007azx.1,uc007azy.1_5end
|description=CAGE_peak_1_at_Sf3b1_5end
|id=chr1:55084221..55084250,-
|ontology_enrichment_celltype=CL:0000542!1.43e-07!13;CL:0000051!1.43e-07!13;CL:0000838!2.30e-07!12;CL:0000084!8.84e-07!11;CL:0000827!8.84e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000542,1.43e-07,13;CL:0000051,1.43e-07,13;CL:0000838,2.30e-07,12;CL:0000084,8.84e-07,11;CL:0000827,8.84e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!1.55e-08!29;UBERON:0000065!7.40e-08!41;UBERON:0001004!1.37e-07!42;UBERON:0001048!3.29e-07!147;UBERON:0002370!5.05e-07!23;UBERON:0000974!5.05e-07!23;UBERON:0004807!5.05e-07!23;UBERON:0005058!5.05e-07!23;UBERON:0003351!5.05e-07!23;UBERON:0009113!5.05e-07!23;UBERON:0003295!5.05e-07!23;UBERON:0009722!5.05e-07!23;UBERON:0005562!5.05e-07!23;UBERON:0007690!5.05e-07!23;UBERON:0003081!5.83e-07!88;UBERON:0000926!7.21e-07!193;UBERON:0004120!7.21e-07!193;UBERON:0006603!7.21e-07!193
|ontology_enrichment_uberon_v019_2=UBERON:0000153,7.91e-09,43;UBERON:0004177,1.55e-08,29;UBERON:0005057,1.55e-08,29;UBERON:0000065,7.40e-08,41;UBERON:0001048,1.30e-07,134;UBERON:0001004,1.37e-07,42;UBERON:0000926,2.34e-07,120;UBERON:0004120,2.34e-07,120;UBERON:0006603,2.34e-07,120;UBERON:0007811,3.56e-07,36;UBERON:0000077,3.85e-07,35;UBERON:0002370,5.05e-07,23;UBERON:0000974,5.05e-07,23;UBERON:0004807,5.05e-07,23;UBERON:0005058,5.05e-07,23;UBERON:0003351,5.05e-07,23;UBERON:0009113,5.05e-07,23;UBERON:0003295,5.05e-07,23;UBERON:0009722,5.05e-07,23;UBERON:0005562,5.05e-07,23;UBERON:0007690,5.05e-07,23
|phase1_expression=155.184232844545,90.3846305785945,67.7948866690409,63.5174843744343,65.1164448930251,96.1948228055129,76.6249461153324,241.073244865423,413.496476959445,326.988143271825,152.72642765715,164.88905264336,275.633175189241,290.672838043166,72.2848183139988,113.386149738303,93.7412916691716,233.599733447775,219.108864901971,167.633912460222,97.9698702540324,147.447062533315,126.159498154106,102.075165742193,86.0284804001888,68.9078356938024,70.2142053739292,81.663597187952,69.9286183599456,101.820172423012,76.4970261760801,44.4521471421742,58.4311548205342,15.8481681015439,103.697731490708,78.4627526092084,95.7554280870511,251.537510072882,218.773896466664,269.091204402532,256.468928781522,254.092920404542,258.777018165605,116.454556627409,116.076586246344,118.204108392123,25.8189143634853,10.6832326626419,7.46933021297204,17.1098311185369,12.1788186814065,7.18762821824858,217.110692238711,150.87532553836,187.204246122352,71.0036043459214,81.9485638224844,65.4903557192352,46.5327859977075,51.3121249893872,25.3532561402472,15.9256930072492,7.11435836888911,15.7482450524245,12.8552627133707,15.6305625288142,7.19040265244171,14.9845139075406,104.933887656179,50.4922209360523,64.7800880962257,30.2790043468032,37.5476519617743,94.6853877931595,65.4624567054554,34.0110951045708,34.1359231098105,87.4658265883536,84.7908063574464,49.7211304742831,56.9968019643012,66.1559980607085,38.5272538621906,79.9122906244986,73.190360685092,65.4075459751542,108.060105726519,79.0333650299275,96.5508964998097,89.7790134068612,164.353165093851,55.9275520037901,38.078394687634,60.4467574634355,59.7794304051856,56.4513877742643,84.2666520790511,132.424360643151,82.8717354683151,68.547877455006,120.702810748615,127.043212640175,68.7974147207943,35.5533351576666,51.0918856786465,59.7929282521233,36.3977600410644,100.253446393335,307.100330005546,89.5106098560893,86.3956927295357,66.9824052286711,72.1826506411463,91.4886428154419,143.340633998424,96.7632753238501,102.091521674296,111.630703542172,80.4995602274386,120.354536360872,128.750605262409,135.280195624727,89.4680453846986,129.409112279104,157.713370230532,93.4972822063445,196.137358816191,100.783658806892,182.981126985213,82.6844329514621,82.8076091101714,133.444921943862,100.991930031713,127.857728665165,94.3357722300403,114.542331725837,156.221584146385,144.560899848928,121.812369565031,93.6466258694809,132.722851821958,85.7534849536854,122.262186137832,138.497727591022,168.118189402931,178.462412356796,142.614024779907,110.207635934821,115.544444212003,165.278714066674,156.596500505914,124.283980286435,148.755278335695,133.38057977799,135.404645756427,124.595451028377,113.758536344744,126.357822393325,137.535133707467,104.391389357893,104.598622751569,121.361829424724,120.029580941702,114.910311340484,120.482615165042,121.382719159713,116.430656207435,161.486468493795,138.559393627151,145.780708102237,129.30475122564,102.778591160009,99.895302457428,119.980538371772,104.303814487807,174.526222595266,105.403591771832,73.2528069658018,137.357633344691,143.290026537891,127.321051786228,114.556241986059,105.184814738624,83.8895011156386,114.361503832227,89.1021345056899,104.304111652112,126.934229162254,125.361908017594,105.161870812544,110.230405436094,135.41606581297,47.2273073373173,136.869718106455,144.265901661543,112.415532970613,116.177539813408,164.749040922358,148.669098779129,129.454099778111,121.831012804907,120.435631987677,51.2863044860768,124.966984181354,79.409834025734,104.560882258957,82.1583491623437,81.7590571560693,82.2441501253986,81.4180068985794,127.600423471953,96.0964946158285,110.701519026063,95.6402235508054,107.965034897638,87.8974495255949,93.1072576178724,83.9451727172259,120.089573608293,103.083328003144,141.942494481005,128.836520103368,134.7122025176,147.405506548798,136.875093509458,167.619803509849,150.2262923332,171.856599167449,180.024433814303,154.031515832794,151.44472909639,156.510281385196,120.633027151418,76.6907014184381,93.4352118736169,116.721243686902,72.0872149045186,97.7545466178974,88.0330656672747,90.3845919391655,91.1818754112982,92.1435436540067,100.81815013895,96.543394372831,116.746505219175,110.682923538433,92.7016506835508,87.9690132313049,106.332412267615,155.519517148155,106.59700399141,73.3630287109091,139.919898084722,116.138966572665,91.5941454545744,103.181770365867,82.534331051377,106.939080221594,62.8993031836046,90.6933686434586,122.753439254905,126.509737858172,139.390474948426,117.565673952124,106.472794660749,61.8813259489121,134.473644272746,128.383560044324,41.3947788104814,115.098987811965,137.970701773689,119.328738975785,117.488000709914,77.9430269733374,95.5113851819301,76.6832096527029,91.9603419889191,125.808210994349,167.923003763742,153.013890542731,130.115854963419,124.911224705992,130.000453136913,75.653523220288,113.458264849774,131.055661156646,130.562141795647,158.041135426936,176.472247987844,153.28137604837,212.133080632331,209.087469771545,202.048361702068,59.189578316937,125.585389451711,138.867196047638,136.302740117113,122.316653168464,114.203620839251,117.331981354794,137.783310694135,89.7822881005222,126.633828906082,98.7929507808212,103.719500717891,129.481328874086,89.3475848468327,116.670713006429,100.228023018719,115.228077584711,172.397783570613,130.334589228794,128.557556265922,140.36037419991,132.20577287236,114.712036788029,86.5636669289001,116.16609255342,129.531060508862,140.535956098973,150.004422859855,180.413369729473,180.919670788857,234.94892902934,211.473888467625,209.920117454902,212.5556378934,220.806176564556,277.699519583408,79.5823646489392,59.0482635975012,110.258329773046,70.679423489277,120.743496270119,81.2665118703618,114.469765167041,93.6789816575518,105.330141847426,88.1012874482624,103.112852977608,87.6530135562277,79.5680234251274,83.5800674120184,83.8487226102568,106.653555036625,101.32227072545,108.301035747225,73.5219642687584,137.933384939371,78.6079000600031,105.854835567563,107.696275661254,91.8105652310562,75.9273689898558,89.5654313040509,98.6907924174303,82.7971560746883,88.1913269055653,86.1829619626815,105.442124834817,126.977884129161,114.284897042692,134.686174700913,105.737199464842,119.129087071311,111.887347868949,104.66981880404,129.829447558538,98.4034754346142,102.935967572416,119.21809497366,102.033184475895,111.04906889009,109.914375651288,107.744576022063,119.696718704219,114.482867972061,85.2936252919762,103.212465768032,108.157921648369,110.901612698986,112.639083542197,101.46887737608,61.2035915947968,86.3207635163557,108.939624402487,143.657537383701,86.2512448757306,92.5152664125482
|short_description=p1@Sf3b1
}}

Revision as of 20:32, 13 September 2013

Short description:p1@Sf3b1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sf3b1_5end
Coexpression cluster:MCL_coexpression_mm9:298
Association with transcript: 71bp_to_ENSMUST00000027127, NM_031179, uc007azx.1, uc007azy.1_5end
EntrezGene:Sf3b1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sf3b1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7155.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I590.38
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I667.79
CD326+ enterocyte, pool1.CNhs13542.11848-124I363.52
CD326+ enterocyte, pool2.CNhs13197.11849-124I465.12
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I796.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I876.62
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E9241.07
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7413.50
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2326.99
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E6152.73
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F1164.89
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4275.63
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8290.67
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A172.28
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A3113.39
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A593.74
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2233.60
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4219.11
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6167.63
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A397.97
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H2147.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I9126.16
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1102.08
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D286.03
GP2+ M cell, pool1.CNhs13228.11845-124H968.91
GP2+ M cell, pool2.CNhs13231.11846-124I170.21
GP2+ M cell, pool3.CNhs13240.11847-124I281.66
Ileum epithelium, pool1.CNhs13199.10252-104B969.93
Ileum epithelium, pool2.CNhs13232.10253-104C1101.82
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C876.50
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I344.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G658.43
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5103.70
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F678.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F795.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G8251.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H1218.77
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H3269.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G9256.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H2254.09
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H4258.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D8116.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D9116.08
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B3118.20
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B725.82
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C210.68
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C317.11
Mouse Astrocytes, donor2.CNhs12078.11552-120C412.18
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2217.11
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9150.88
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1187.20
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C171.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E181.95
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C565.49
Mouse Granule cells, donor1.CNhs12131.11713-123C346.53
Mouse Granule cells, donor2.CNhs12357.11731-123E351.31
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C615.93
Mouse Meningeal cells, donor3.CNhs12109.11639-122D17.11
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C715.75
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E712.86
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D215.63
Mouse Microglia, donor1.CNhs12629.11718-123C87.19
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D5104.93
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F550.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D964.78
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D537.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D294.69
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F265.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D634.01
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D334.14
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F387.47
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D784.79
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D449.72
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F457.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D866.16
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E438.53
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E579.91
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.19
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D665.41
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6108.06
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E179.03
Mouse Schwann, donor1.CNhs12507.11728-123D996.55
Mouse Schwann, donor2.CNhs12573.11746-123F989.78
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3164.35
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F755.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C438.08
Mouse hepatocyte, donor3.CNhs12615.11637-122C860.45
Mouse hepatocyte, donor6.CNhs13090.11822-124F459.78
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A784.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I7132.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E382.87
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I868.55
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6120.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H1127.04
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I868.80
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B635.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G151.09
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G259.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G336.40
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B6100.25
accessory axillary lymph node, adult.CNhs10475.1063-29H9307.10
adrenal gland, adult.CNhs10508.49-24D789.51
adrenal gland, embryo E14.CNhs11038.406-44C586.40
adrenal gland, embryo E16.CNhs11004.1254-43D666.98
adrenal gland, embryo E17.CNhs11043.1263-45I172.18
adrenal gland, embryo E18.CNhs11026.1262-18F591.49
adrenal gland, neonate N00.CNhs11191.1311-23C1143.34
adrenal gland, neonate N25.CNhs11223.1377-27I396.76
amnion, adult pregnant day17.5.CNhs10488.583-22A8102.09
aorta, adult.CNhs10498.46-23H1111.63
bone (os femoris), adult.CNhs10483.56-12G280.50
bone (os femoris), neonate N02.CNhs11227.1985-43F5120.35
bone (os femoris), neonate N16.CNhs11225.1525-43A6128.75
bone (os femoris), neonate N20.CNhs11195.1350-25C3135.28
cecum, adult.CNhs10467.37-13H489.47
cerebellum, adult.CNhs10494.15-8B2129.41
cerebellum, neonate N30.CNhs11135.1395-42I2157.71
colon, adult.CNhs10468.36-18H793.50
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C7196.14
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D1100.78
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D4182.98
corpora quadrigemina, adult.CNhs10501.16-22A482.68
corpus striatum, adult.CNhs10487.19-21D882.81
corpus striatum, neonate N00.CNhs11226.630-43F1133.44
cortex, adult.CNhs10473.12-14D5100.99
cortex, neonate N30.CNhs11107.1392-42F2127.86
diencephalon, adult.CNhs10482.20-12F294.34
diencephalon, neonate N30.CNhs11201.1388-42B2114.54
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B1156.22
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A2144.56
epididymis, adult.CNhs10490.58-23B2121.81
eyeball, adult.CNhs10484.31-12G493.65
eyeball, embryo E12.CNhs11016.345-16C6132.72
eyeball, embryo E14.CNhs10521.399-16E285.75
eyeball, embryo E15.CNhs10593.426-16C9122.26
eyeball, embryo E17.CNhs11023.1261-18D4138.50
eyeball, neonate N00.CNhs11207.633-15C6168.12
eyeball, neonate N01.CNhs11140.1532-43E7178.46
eyeball, neonate N02.CNhs11205.1551-44G8142.61
eyeball, neonate N16.CNhs11188.777-19A2110.21
forelimb, embryo E11.CNhs10596.335-25E2115.54
forelimb, embryo E12.CNhs10600.359-14H2165.28
forelimb, embryo E13.CNhs10589.384-1E2156.60
forelimb, embryo E14.CNhs10577.413-26A8124.28
forelimb, embryo E15.CNhs11007.437-20E7148.76
forelimb, embryo E17.CNhs10598.1517-43C4133.38
forelimb, embryo E18.CNhs11008.1520-43B5135.40
gonad, embryo E13.CNhs11044.1564-45I6124.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C8113.76
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D2126.36
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D5137.54
heart, embryo E11.CNhs10586.331-24E9104.39
heart, embryo E12.CNhs11015.353-12F5104.60
heart, embryo E13.CNhs11013.376-3I9121.36
heart, embryo E14.CNhs10597.403-26D4120.03
heart, embryo E15.CNhs11017.431-16C8114.91
heart, embryo E16.CNhs11021.457-17C6120.48
heart, embryo E17.CNhs11025.479-18E5121.38
heart, embryo E18.CNhs11030.1283-20G3116.43
heart, neonate N00.CNhs11213.639-21E3161.49
heart, neonate N03.CNhs11221.1349-25I2138.56
heart, neonate N10.CNhs11118.749-24G1145.78
heart, neonate N16.CNhs11209.782-15G1129.30
heart, neonate N20.CNhs11127.821-26I6102.78
heart, neonate N25.CNhs11196.1351-25D399.90
heart, neonate N30.CNhs11202.1390-42D2119.98
hippocampus, adult.CNhs10478.13-16E8104.30
hippocampus, neonate N00.CNhs11228.627-43G1174.53
intestinal mucosa, adult.CNhs10506.860-29I3105.40
intestine, adult.CNhs10496.178-9A373.25
intestine, embryo E12.CNhs11019.1251-16I5137.36
intestine, embryo E13.CNhs11010.381-16D5143.29
intestine, embryo E15.CNhs10602.976-16D8127.32
intestine, embryo E16.CNhs10585.463-22H4114.56
intestine, embryo E17.CNhs10582.482-18D3105.18
intestine, embryo E18.CNhs10526.1289-20F783.89
intestine, neonate N00.CNhs11126.644-26D1114.36
intestine, neonate N01.CNhs11192.1322-23E989.10
intestine, neonate N06.CNhs11102.688-20B8104.30
intestine, neonate N07.CNhs11095.720-20F2126.93
intestine, neonate N10.CNhs11098.755-23A5125.36
intestine, neonate N20.CNhs11187.827-18D1105.16
intestine, neonate N25.CNhs11121.1352-25E3110.23
intestine, neonate N30.CNhs11131.1384-42G1135.42
kidney, embryo E14.CNhs10606.411-4I947.23
kidney, embryo E15.CNhs10997.434-16F8136.87
kidney, embryo E16.CNhs10584.464-22A5144.27
kidney, embryo E17.CNhs11028.483-18I2112.42
kidney, embryo E18.CNhs11001.1288-20C7116.18
kidney, neonate N00.CNhs11214.646-21G7164.75
kidney, neonate N10.CNhs11206.758-6D5148.67
kidney, neonate N20.CNhs11113.832-19I1129.45
kidney, neonate N25.CNhs11122.1353-25F3121.83
kidney, neonate N30.CNhs11203.1385-42H1120.44
liver, adult pregnant day01.CNhs10466.508-5B251.29
liver, embryo E12.CNhs10601.355-15F8124.97
liver, embryo E13.CNhs10524.378-3H679.41
liver, embryo E14.CNhs10594.409-16E1104.56
liver, embryo E15.CNhs10520.433-16D782.16
liver, embryo E16.CNhs10523.462-17F581.76
liver, embryo E17.CNhs10510.481-18A382.24
liver, embryo E18.CNhs10579.499-43G481.42
liver, neonate N00.CNhs11117.641-24F4127.60
liver, neonate N03.CNhs11123.1345-25G296.10
liver, neonate N06.CNhs11101.684-20A8110.70
liver, neonate N07.CNhs11103.716-20H295.64
liver, neonate N10.CNhs11115.751-24B9107.97
liver, neonate N20.CNhs11220.823-25A387.90
liver, neonate N25.CNhs11198.1368-26H193.11
liver, neonate N30.CNhs11106.1382-42D183.95
lung, adult.CNhs10474.28-22B1120.09
lung, embryo E12.CNhs10522.354-16G2103.08
lung, embryo E14.CNhs10604.404-26F8141.94
lung, embryo E15.CNhs11020.432-17C5128.84
lung, embryo E16.CNhs10998.458-17B6134.71
lung, embryo E17.CNhs10605.480-44A6147.41
lung, embryo E18.CNhs10583.1287-20I6136.88
lung, neonate N00.CNhs11224.640-42C6167.62
lung, neonate N06.CNhs11212.683-20E5150.23
lung, neonate N07.CNhs11111.715-19A3171.86
lung, neonate N10.CNhs11219.750-23E6180.02
lung, neonate N20.CNhs11109.822-18A4154.03
lung, neonate N25.CNhs11119.1359-25C7151.44
lung, neonate N30.CNhs11133.1394-42H2156.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A1120.63
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A176.69
mammary gland, adult lactating day02.CNhs10480.595-22B693.44
mammary gland, adult pregnant day19.CNhs10476.588-5H2116.72
medulla oblongata, adult.CNhs10477.17-12C272.09
medulla oblongata, neonate N30.CNhs11200.1396-42A397.75
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C788.03
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C290.38
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E191.18
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E292.14
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E3100.82
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D796.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D8116.75
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9110.68
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D492.70
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D587.97
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D6106.33
olfactory brain, adult.CNhs10489.18-22I9155.52
ovary, adult.CNhs10507.91-2I7106.60
ovary, embryo E18.CNhs11040.505-44H773.36
ovary, neonate N00.CNhs11217.1299-22I4139.92
oviduct, adult pregnant day01.CNhs10500.988-6G6116.14
pancreas, adult.CNhs10486.34-16E491.59
pancreas, embryo E14.CNhs11012.405-44F4103.18
pancreas, embryo E15.CNhs11042.1556-45F282.53
pancreas, embryo E16.CNhs11003.460-26E5106.94
pancreas, embryo E17.CNhs10599.1558-45G362.90
pancreas, embryo E18.CNhs10580.1535-43I790.69
pancreas, neonate N00.CNhs11105.645-26G9122.75
pancreas, neonate N01.CNhs11138.1531-43D7126.51
pancreas, neonate N02.CNhs11139.1539-43D8139.39
pancreas, neonate N16.CNhs11136.787-43B6117.57
pancreas, neonate N25.CNhs11094.1555-45E2106.47
pancreas, neonate N30.CNhs11182.1548-44H561.88
pituitary gland, adult.CNhs10493.21-1G8134.47
pituitary gland, embryo E12.CNhs11018.346-16E6128.38
pituitary gland, embryo E13.CNhs11009.370-44C741.39
pituitary gland, embryo E14.CNhs11037.398-44A5115.10
pituitary gland, embryo E15.CNhs10592.427-16B9137.97
pituitary gland, embryo E16.CNhs11036.449-43F6119.33
pituitary gland, embryo E17.CNhs11039.1265-44F5117.49
pituitary gland, neonate N00.CNhs11190.1308-22E977.94
placenta, adult pregnant day10.CNhs10472.539-13I795.51
placenta, adult pregnant day17.CNhs10464.577-18G376.68
prostate, adult.CNhs10470.859-1F891.96
skin, adult.CNhs10492.30-1C3125.81
skin, neonate N00.CNhs11124.650-25G4167.92
skin, neonate N03.CNhs11215.662-22H3153.01
skin, neonate N06.CNhs11097.693-20I5130.12
skin, neonate N10.CNhs11108.762-6C4124.91
small intestine, neonate N16.CNhs11114.790-21I1130.00
spinal cord, adult.CNhs10505.24-13C975.65
spleen, adult.CNhs10465.25-2G2113.46
spleen, embryo E16.CNhs11035.461-43C1131.06
spleen, embryo E18.CNhs11011.1271-21F2130.56
spleen, neonate N10.CNhs11116.752-24D1158.04
spleen, neonate N20.CNhs11112.824-19H1176.47
spleen, neonate N25.CNhs11099.1354-25G3153.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C6212.13
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C9209.09
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D3202.05
stomach, adult.CNhs10503.33-1H659.19
stomach, embryo E12.CNhs10588.356-43E3125.59
stomach, embryo E15.CNhs10603.1252-16G8138.87
stomach, embryo E16.CNhs11022.459-17D4136.30
stomach, embryo E17.CNhs11006.1035-18D5122.32
stomach, embryo E18.CNhs10999.1286-20C6114.20
stomach, neonate N03.CNhs11193.1340-24B8117.33
stomach, neonate N07.CNhs11210.718-18A9137.78
stomach, neonate N25.CNhs11104.1355-25E489.78
stomach, neonate N30.CNhs11134.1386-42I1126.63
submandibular gland, adult.CNhs10469.59-29C198.79
testis, adult.CNhs10504.57-7G5103.72
testis, embryo E13.CNhs11031.389-23F5129.48
testis, embryo E15.CNhs11034.443-27C589.35
testis, embryo E16.CNhs11033.470-26G5116.67
testis, embryo E17.CNhs11029.486-18I5100.23
testis, embryo E18.CNhs11027.503-18G5115.23
testis, neonate N00.CNhs11189.1300-22B7172.40
testis, neonate N07.CNhs11222.726-26I4130.33
testis, neonate N10.CNhs11204.763-44D9128.56
testis, neonate N20.CNhs11110.839-18H3140.36
testis, neonate N30.CNhs11130.1391-42E2132.21
thymus, adult.CNhs10471.38-12B5114.71
thymus, embryo E14.CNhs11041.402-44I486.56
thymus, embryo E15.CNhs11005.430-45I2116.17
thymus, embryo E16.CNhs11002.456-26C5129.53
thymus, embryo E17.CNhs10581.478-18C1140.54
thymus, embryo E18.CNhs10595.1273-19G4150.00
thymus, neonate N02.CNhs11181.1541-43F8180.41
thymus, neonate N03.CNhs11137.2104-43C7180.92
thymus, neonate N06.CNhs11197.681-26C4234.95
thymus, neonate N07.CNhs11211.713-19D3211.47
thymus, neonate N10.CNhs11194.748-24E4209.92
thymus, neonate N20.CNhs11186.820-7A2212.56
thymus, neonate N25.CNhs11125.1362-25G7220.81
thymus, neonate N30.CNhs11132.1393-42G2277.70
tongue, adult.CNhs10499.32-1B479.58
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H359.05
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F7110.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G570.68
urinary bladder, adult.CNhs10481.879-12E4120.74
uterus, adult pregnant day19.CNhs10497.590-15F581.27
uterus, adult.CNhs10509.92-27E5114.47
vagina, adult.CNhs10502.89-27D593.68
vesicular gland, adult.CNhs10491.51-27F8105.33
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A188.10
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2103.11
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A387.65
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D779.57
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A483.58
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A583.85
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6106.65
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7101.32
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8108.30
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A973.52
whole body, embryo E11.CNhs11014.324-5I8137.93
whole body, embryo E12.CNhs10587.857-27C978.61
whole body, embryo E13.CNhs10512.372-23H2105.85
whole body, embryo E14.5.CNhs10578.420-27D2107.70
whole body, embryo E14.CNhs10519.395-14B191.81
whole body, embryo E16.CNhs10514.453-14F275.93
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G589.57
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G598.69
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G582.80
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G588.19
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G586.18
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G5105.44
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G5126.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G5114.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G5134.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G5105.74
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G5119.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G5111.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G5104.67
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G5129.83
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G598.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G5102.94
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G5119.22
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G5102.03
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G5111.05
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G5109.91
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G5107.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G5119.70
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G5114.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G585.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G5103.21
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G5108.16
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G5110.90
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G5112.64
whole body, embryo E17.5.CNhs10513.490-9F9101.47
whole body, embryo E17.CNhs10517.475-3I561.20
whole body, embryo E18.CNhs10516.493-3B386.32
whole body, neonate N00.CNhs10525.657-19C2108.94
whole body, neonate N01.CNhs10576.659-23C6143.66
whole body, neonate N06.CNhs10515.692-21D186.25
whole body, neonate N10.CNhs10518.761-6B492.52





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte1.43e-0713
common lymphoid progenitor1.43e-0713
lymphoid lineage restricted progenitor cell2.30e-0712
T cell8.84e-0711
pro-T cell8.84e-0711







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