FFCP PHASE1:Mm9::chr12:33892535..33892536,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=124|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:33892535..33892536,+|id=chr12:33892535..33892536,+|ontology_enrichment_celltype=CL:0000553!6.99e-13!6;CL:0000556!6.99e-13!6;CL:0000050!1.85e-08!9;CL:0000414!7.55e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,2.62e-33,6;CL:0000556,2.62e-33,6;CL:0002027,4.03e-30,3;CL:0002006,4.03e-30,3;CL:0002024,4.03e-30,3;CL:0000050,1.40e-22,9;CL:0000839,5.98e-16,13;CL:0000763,3.85e-13,16;CL:0000049,3.26e-11,19;CL:0002031,9.87e-09,25;CL:0000988,5.32e-07,32;CL:0002032,5.32e-07,32;CL:0000037,5.32e-07,32;CL:0000837,5.32e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.85e-13,16;UBERON:0001474,8.33e-10,22;UBERON:0004765,8.33e-10,22;UBERON:0001434,8.33e-10,22;UBERON:0002204,5.32e-07,32|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,5.66930748691513,4.19737126876888,0.157731082679119,0.548457734422955,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.365855945745545,0,0,0,0,0,1.63692417267876,0.154936841185966,0,0,0,0,0,0,0|short_description=p@chr12:33892535..33892536,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:33892535..33892536,+ | |||
|id=chr12:33892535..33892536,+ | |||
|ontology_enrichment_celltype=CL:0000553!6.99e-13!6;CL:0000556!6.99e-13!6;CL:0000050!1.85e-08!9;CL:0000414!7.55e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.62e-33,6;CL:0000556,2.62e-33,6;CL:0002027,4.03e-30,3;CL:0002006,4.03e-30,3;CL:0002024,4.03e-30,3;CL:0000050,1.40e-22,9;CL:0000839,5.98e-16,13;CL:0000763,3.85e-13,16;CL:0000049,3.26e-11,19;CL:0002031,9.87e-09,25;CL:0000988,5.32e-07,32;CL:0002032,5.32e-07,32;CL:0000037,5.32e-07,32;CL:0000837,5.32e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.85e-13,16;UBERON:0001474,8.33e-10,22;UBERON:0004765,8.33e-10,22;UBERON:0001434,8.33e-10,22;UBERON:0002204,5.32e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,5.66930748691513,4.19737126876888,0.157731082679119,0.548457734422955,1.27316895539409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0.224862112384854,0.405720242777006,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0.188368457004691,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0.365855945745545,0,0,0,0,0,1.63692417267876,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:33892535..33892536,+ | |||
}} |
Revision as of 22:44, 12 September 2013
Short description: | p@chr12:33892535..33892536, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:33892535..33892536, + |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.62e-33 | 6 |
megakaryocyte | 2.62e-33 | 6 |
CD9-positive, CD41-positive megakaryocyte cell | 4.03e-30 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 4.03e-30 | 3 |
Kit-positive megakaryocyte progenitor cell | 4.03e-30 | 3 |
megakaryocyte-erythroid progenitor cell | 1.40e-22 | 9 |
myeloid lineage restricted progenitor cell | 5.98e-16 | 13 |
myeloid cell | 3.85e-13 | 16 |
common myeloid progenitor | 3.26e-11 | 19 |
hematopoietic lineage restricted progenitor cell | 9.87e-09 | 25 |
hematopoietic cell | 5.32e-07 | 32 |
hematopoietic oligopotent progenitor cell | 5.32e-07 | 32 |
hematopoietic stem cell | 5.32e-07 | 32 |
hematopoietic multipotent progenitor cell | 5.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.85e-13 | 16 |
bone element | 8.33e-10 | 22 |
skeletal element | 8.33e-10 | 22 |
skeletal system | 8.33e-10 | 22 |
musculoskeletal system | 5.32e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.