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FFCP PHASE1:Mm9::chr5:143579225..143579237,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=231861|HGNC=|MCL_coexpression_id=52|UniProt=D3YV17|association_with_transcript=103bp_to_ENSMUST00000151477_5end|description=CAGE_peak_4_at_Tnrc18_5end|id=chr5:143579225..143579237,-|ontology_enrichment_celltype=CL:0000117!9.44e-11!23;CL:0000337!9.44e-11!23;CL:0000055!1.26e-09!50;CL:0002321!2.00e-08!70;CL:0000220!2.00e-08!70;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39;CL:0000221!2.83e-08!44;CL:0000133!2.83e-08!44;CL:0002319!8.23e-08!43|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-14,23;CL:0000337,3.42e-14,23;CL:0002321,3.21e-12,70;CL:0000393,7.34e-12,39;CL:0000211,7.34e-12,39;CL:0000221,4.00e-11,44;CL:0000133,4.00e-11,44;CL:0002319,2.16e-10,43;CL:0000540,5.76e-08,33;CL:0000047,5.76e-08,33;CL:0000031,5.76e-08,33;CL:0000404,5.76e-08,33;CL:0002609,1.05e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-08,34;UBERON:0000073,2.41e-07,54;UBERON:0001017,2.48e-07,73;UBERON:0004121,6.38e-07,95;UBERON:0000924,6.38e-07,95;UBERON:0006601,6.38e-07,95;UBERON:0001016,6.85e-07,75|phase1_expression=0.80074423552397,0,1.36499771816861,0,0.500895729946347,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0.971020706062307,1.6366586336825,1.82478476195126,2.0190142737785,0.782391344348039,3.70642765846759,4.83309602015838,2.13872888981712,1.1198913730029,0,0,0,0,1.28629718017973,2.0057340795713,5.15672092277442,2.63011399117477,4.7609188134483,3.80298842103708,1.35537812827653,2.66788438833342,2.2497492932035,1.97773272513395,1.4209602298922,5.09320187881288,5.37905627450176,8.19147937236973,9.72042755988173,5.46844899513593,1.71390590642282,2.87129103237098,2.81728838194394,4.88811902193005,1.83843757322004,1.10115880999389,1.27687338085188,0.921639199537461,2.1101806036831,4.29991924931325,6.25096044668112,0.558365998002762,0.56276261003168,0.763991238884051,4.41942878210502,3.55929201997757,1.3047961207771,0.681535739998656,0.529000920747499,0,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,1.41335829804136,2.95771181531029,2.56652954828636,5.09610479413291,28.4426681261332,0.432982082022428,0.253359865475099,0.505524445014783,1.1418387971906,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.470354828542819,0.376999773989026,0.247194967734374,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,0.149790639404823,0.915001205637253,1.38219787324151,0,0,0.83115217823824,0.324482526135515,0.916554274652847,0.373220911830279,0.252722758433675,0.841767423545896,0.780722657776222,0.689706313300419,0.900310649026746,0.753524089178575,0.816437989815934,0.2562274405697,1.03071897015702,0.258703370739016,2.15567992932842,5.67318240503458,3.51902248327898,3.06874025398605,0.556094498451196,1.39300866608867,1.64625709126355,0.796137067273973,0,0.257347907114715,0.568326998791185,1.44988040774851,0.938104239924385,0.720248245844059,1.18372367792605,1.96764231747404,0.617068451549513,0.697601834251224,1.07309360559848,0.116765342367169,0.987359099480883,0.656669856316381,0.891756905004413,0.584799949701329,0,0.805238512562231,0.630869845692382,0.617427674275707,0,0,1.49301775374664,0.928946687441754,1.15980715189884,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,1.3279672796094,0.442830443938806,0.470996183524124,0.493588655687202,0.296452627087149,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0.739012760666419,0.37898282354097,0.977789858652155,0.678980343100753,0.938760993154008,1.34005005953453,0.952174563544055,1.56106918286239,0.630540576424764,1.10732344824387,0.797273843287435,1.14704320301017,1.03610989119537,0.433947175744535,1.50791283939272,1.08781136763742,0.983528546038072,1.37968373152366,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.99358059645788,0.178065603667255,1.14020871547503,0.659880491890142,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0,1.09060118843252,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.03486947026204,1.50035924522115,0.886701168211368,0.891844088010353,0.493647061806363,1.522324745573,0,0,0.220528398054962,2.4732937941222,0.484393280087717,1.08563264870681,0.954978752025092,0.984845398470368,0.582961673259701,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,1.73984796469624,0.609958401380546,0.972048067396211,1.67270636811575,0.87345025498471,0.674321731924103,0.743881101528023,0,0.259229946583586,1.24267862617385,0,0.747582730219894,0.66183396182839,1.16670713006429,0.774958940866387,0.675824501963113,1.17357238645754,0.911430693907651,0.524296722128554,0,0.288030006257865,0,1.01362607645082,0.924398614483445,0.51968329191118,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.302899349844443,0.15241361331,0,0,0.384847366561318,0.116876902181569,1.36038230169127,0,0,0.503653849092235,0.579568782096571,0.750729901804728,1.28206136987086,1.07184189539533,0,0.564751842617067,1.84130094602871,0,0.515559547031063,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0,0.830298780673413,3.19219898720825,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,1.01391719956096,0.188626341386076,1.21733959710847,0.960377286073039,1.55075766180156,3.33405583898152,1.39061191133827,2.31491064556446,0.824171801606613,0.883193520806384,0.685738504770831,0.532427418478012,0.715308569841963,1.16277133305863,0.564656282491984,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.29551344712669,0,0.77468420592983,1.35034627686799,0.749431733813838,0,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843|short_description=p4@Tnrc18}}
|EntrezGene=231861
|HGNC=
|MCL_coexpression_id=52
|UniProt=D3YV17
|association_with_transcript=103bp_to_ENSMUST00000151477_5end
|description=CAGE_peak_4_at_Tnrc18_5end
|id=chr5:143579225..143579237,-
|ontology_enrichment_celltype=CL:0000117!9.44e-11!23;CL:0000337!9.44e-11!23;CL:0000055!1.26e-09!50;CL:0002321!2.00e-08!70;CL:0000220!2.00e-08!70;CL:0000393!2.38e-08!39;CL:0000211!2.38e-08!39;CL:0000221!2.83e-08!44;CL:0000133!2.83e-08!44;CL:0002319!8.23e-08!43
|ontology_enrichment_celltype_v019_2=CL:0000117,3.42e-14,23;CL:0000337,3.42e-14,23;CL:0002321,3.21e-12,70;CL:0000393,7.34e-12,39;CL:0000211,7.34e-12,39;CL:0000221,4.00e-11,44;CL:0000133,4.00e-11,44;CL:0002319,2.16e-10,43;CL:0000540,5.76e-08,33;CL:0000047,5.76e-08,33;CL:0000031,5.76e-08,33;CL:0000404,5.76e-08,33;CL:0002609,1.05e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.08e-08,34;UBERON:0000073,2.41e-07,54;UBERON:0001017,2.48e-07,73;UBERON:0004121,6.38e-07,95;UBERON:0000924,6.38e-07,95;UBERON:0006601,6.38e-07,95;UBERON:0001016,6.85e-07,75
|phase1_expression=0.80074423552397,0,1.36499771816861,0,0.500895729946347,0.671517087647559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0.0992909512008853,0,0,0.22940928106717,0.57423196411502,0.430761996159075,0.861884930743556,0,0.252030129759931,0.221730510655305,0,0,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0.971020706062307,1.6366586336825,1.82478476195126,2.0190142737785,0.782391344348039,3.70642765846759,4.83309602015838,2.13872888981712,1.1198913730029,0,0,0,0,1.28629718017973,2.0057340795713,5.15672092277442,2.63011399117477,4.7609188134483,3.80298842103708,1.35537812827653,2.66788438833342,2.2497492932035,1.97773272513395,1.4209602298922,5.09320187881288,5.37905627450176,8.19147937236973,9.72042755988173,5.46844899513593,1.71390590642282,2.87129103237098,2.81728838194394,4.88811902193005,1.83843757322004,1.10115880999389,1.27687338085188,0.921639199537461,2.1101806036831,4.29991924931325,6.25096044668112,0.558365998002762,0.56276261003168,0.763991238884051,4.41942878210502,3.55929201997757,1.3047961207771,0.681535739998656,0.529000920747499,0,0,0,1.07940638327563,0.649776417447669,0.448026887097336,0.280888840263504,0.852151612890289,0.779358013808606,1.41335829804136,2.95771181531029,2.56652954828636,5.09610479413291,28.4426681261332,0.432982082022428,0.253359865475099,0.505524445014783,1.1418387971906,0,0.29688427812965,0.346970653532272,0,0,0.452167921657868,0.470354828542819,0.376999773989026,0.247194967734374,0.433798070759735,0,0.323533699894818,0,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0.239630249011841,0,0.127070227073065,0.149790639404823,0.915001205637253,1.38219787324151,0,0,0.83115217823824,0.324482526135515,0.916554274652847,0.373220911830279,0.252722758433675,0.841767423545896,0.780722657776222,0.689706313300419,0.900310649026746,0.753524089178575,0.816437989815934,0.2562274405697,1.03071897015702,0.258703370739016,2.15567992932842,5.67318240503458,3.51902248327898,3.06874025398605,0.556094498451196,1.39300866608867,1.64625709126355,0.796137067273973,0,0.257347907114715,0.568326998791185,1.44988040774851,0.938104239924385,0.720248245844059,1.18372367792605,1.96764231747404,0.617068451549513,0.697601834251224,1.07309360559848,0.116765342367169,0.987359099480883,0.656669856316381,0.891756905004413,0.584799949701329,0,0.805238512562231,0.630869845692382,0.617427674275707,0,0,1.49301775374664,0.928946687441754,1.15980715189884,0.80673409849337,0.889512175379481,0.570676878337677,0,0.494096864172033,0.502670417600539,0.397912944082302,0.38992817423824,0,0.648414149624083,0.398282546508734,0.758671603812327,0.571242563048644,1.1270773567308,0.407302655690628,0.775809948670503,0.631222379012867,1.3279672796094,0.442830443938806,0.470996183524124,0.493588655687202,0.296452627087149,0.333690211432188,0.393117990226406,0,0,0,0.25462585178142,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0.252578877947112,0.538192240565737,0,0.739012760666419,0.37898282354097,0.977789858652155,0.678980343100753,0.938760993154008,1.34005005953453,0.952174563544055,1.56106918286239,0.630540576424764,1.10732344824387,0.797273843287435,1.14704320301017,1.03610989119537,0.433947175744535,1.50791283939272,1.08781136763742,0.983528546038072,1.37968373152366,0.160550589987792,0.117211686592203,0.327869890753351,0.252470927204373,0.315508219416257,0,0.861693590931196,0.238968797952552,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.963963949265421,0.99358059645788,0.178065603667255,1.14020871547503,0.659880491890142,0,0.728341908464944,0.302323556964751,0.754420319023592,0,0.307435147943927,0,1.09060118843252,0.712994756769443,0.316036757935816,0,0,0.340439605753788,1.08036656418786,1.03486947026204,1.50035924522115,0.886701168211368,0.891844088010353,0.493647061806363,1.522324745573,0,0,0.220528398054962,2.4732937941222,0.484393280087717,1.08563264870681,0.954978752025092,0.984845398470368,0.582961673259701,0.556275906031529,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0.228778173206523,0.169978429993855,0,0,0,1.73984796469624,0.609958401380546,0.972048067396211,1.67270636811575,0.87345025498471,0.674321731924103,0.743881101528023,0,0.259229946583586,1.24267862617385,0,0.747582730219894,0.66183396182839,1.16670713006429,0.774958940866387,0.675824501963113,1.17357238645754,0.911430693907651,0.524296722128554,0,0.288030006257865,0,1.01362607645082,0.924398614483445,0.51968329191118,0.179026695667481,0.198681354781265,0.480781798079875,0.443068581523732,0.302899349844443,0.15241361331,0,0,0.384847366561318,0.116876902181569,1.36038230169127,0,0,0.503653849092235,0.579568782096571,0.750729901804728,1.28206136987086,1.07184189539533,0,0.564751842617067,1.84130094602871,0,0.515559547031063,2.05524755931193,1.5107877947794,0,0.45032120322422,0,0,0.830298780673413,3.19219898720825,0.853668028770671,0.729320151204882,0.209613162627982,0.183843508450014,0.44449345560323,0.824140228955577,0.64183841918363,0.505394423527595,1.01391719956096,0.188626341386076,1.21733959710847,0.960377286073039,1.55075766180156,3.33405583898152,1.39061191133827,2.31491064556446,0.824171801606613,0.883193520806384,0.685738504770831,0.532427418478012,0.715308569841963,1.16277133305863,0.564656282491984,0.423073039458382,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.711810108745045,0.29551344712669,0,0.77468420592983,1.35034627686799,0.749431733813838,0,0.214871054048298,0.57386499620653,0.661774257358546,0.463735671240843
|short_description=p4@Tnrc18
}}

Revision as of 06:56, 14 September 2013

Short description:p4@Tnrc18
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Tnrc18_5end
Coexpression cluster:MCL_coexpression_mm9:52
Association with transcript: 103bp_to_ENSMUST00000151477_5end
EntrezGene:Tnrc18
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Tnrc18

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.82
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.71
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.83
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.29
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.16
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.80
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.36
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C85.09
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.19
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.72
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.82
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F24.89
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.30
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.42
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.96
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.14
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.21
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.92
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E22.16
forelimb, embryo E12.CNhs10600.359-14H25.67
forelimb, embryo E13.CNhs10589.384-1E23.52
forelimb, embryo E14.CNhs10577.413-26A83.07
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E91.45
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D41.18
heart, embryo E15.CNhs11017.431-16C81.97
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.49
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D81.16
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.74
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.94
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I60.95
lung, neonate N00.CNhs11224.640-42C61.56
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A31.11
lung, neonate N10.CNhs11219.750-23E60.80
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.04
lung, neonate N30.CNhs11133.1394-42H20.43
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.99
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I41.14
oviduct, adult pregnant day01.CNhs10500.988-6G60.66
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D71.09
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C71.03
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.89
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C32.47
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H31.09
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C40.98
small intestine, neonate N16.CNhs11114.790-21I10.58
spinal cord, adult.CNhs10505.24-13C90.56
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.74
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.75
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G51.17
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B71.17
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C50.52
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.48
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C93.19
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G53.33
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.42
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gray matter1.08e-0834
regional part of nervous system2.41e-0754
central nervous system2.48e-0773
ectoderm-derived structure6.38e-0795
ectoderm6.38e-0795
presumptive ectoderm6.38e-0795
nervous system6.85e-0775







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