FFCP PHASE1:Mm9::chr15:78258877..78258887,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72844|HGNC=|MCL_coexpression_id=90|UniProt=E9Q6B4,E0CYD2,A6H697|association_with_transcript=-106bp_to_ENSMUST00000159857,ENSMUST00000162517,ENSMUST00000166142_5end|description=CAGE_peak_7_at_Kctd17_5end|id=chr15:78258877..78258887,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002616!7.91e-15!49;UBERON:0000955!1.82e-14!50;UBERON:0006238!1.82e-14!50;UBERON:0001017!3.52e-13!73;UBERON:0005743!3.52e-13!73;UBERON:0000073!9.98e-13!75;UBERON:0001016!9.98e-13!75;UBERON:0002780!1.82e-12!39;UBERON:0001890!1.82e-12!39;UBERON:0006240!1.82e-12!39;UBERON:0003080!4.33e-12!40;UBERON:0000033!8.16e-11!63;UBERON:0004121!1.18e-10!102;UBERON:0000924!1.18e-10!102;UBERON:0006601!1.18e-10!102;UBERON:0001049!3.22e-10!52;UBERON:0005068!3.22e-10!52;UBERON:0006241!3.22e-10!52;UBERON:0007135!3.22e-10!52;UBERON:0002791!4.10e-10!29;UBERON:0003528!4.10e-10!29;UBERON:0001893!4.10e-10!29;UBERON:0003056!2.12e-09!49;UBERON:0000956!2.24e-09!21;UBERON:0001869!2.24e-09!21;UBERON:0000203!2.24e-09!21;UBERON:0002619!3.03e-09!17;UBERON:0002021!7.07e-09!10;UBERON:0000411!7.07e-09!10;UBERON:0001950!7.07e-09!10;UBERON:0002020!2.29e-08!34;UBERON:0007811!4.57e-07!86;UBERON:0002346!9.48e-07!71;UBERON:0003075!9.48e-07!71;UBERON:0007284!9.48e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0001851,2.06e-13,1;UBERON:0005889,2.06e-13,1;UBERON:0002021,6.49e-12,10;UBERON:0000411,6.49e-12,10;UBERON:0001950,6.49e-12,10;UBERON:0002780,8.16e-12,39;UBERON:0001890,8.16e-12,39;UBERON:0006240,8.16e-12,39;UBERON:0003080,1.59e-11,40;UBERON:0002616,4.79e-10,46;UBERON:0000955,7.77e-10,47;UBERON:0006238,7.77e-10,47;UBERON:0003056,1.93e-09,49;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0000073,1.40e-08,54;UBERON:0003528,2.15e-07,29;UBERON:0002791,2.15e-07,29;UBERON:0001893,2.15e-07,29;UBERON:0002619,2.79e-07,17;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,10.980014467647,0,0.173824320192276,1.02286182932132,1.24672826735736,2.75810147215188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,0.859265911718438,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p7@Kctd17}} | ||
|EntrezGene=72844 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=E9Q6B4,E0CYD2,A6H697 | |||
|association_with_transcript=-106bp_to_ENSMUST00000159857,ENSMUST00000162517,ENSMUST00000166142_5end | |||
|description=CAGE_peak_7_at_Kctd17_5end | |||
|id=chr15:78258877..78258887,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!7.91e-15!49;UBERON:0000955!1.82e-14!50;UBERON:0006238!1.82e-14!50;UBERON:0001017!3.52e-13!73;UBERON:0005743!3.52e-13!73;UBERON:0000073!9.98e-13!75;UBERON:0001016!9.98e-13!75;UBERON:0002780!1.82e-12!39;UBERON:0001890!1.82e-12!39;UBERON:0006240!1.82e-12!39;UBERON:0003080!4.33e-12!40;UBERON:0000033!8.16e-11!63;UBERON:0004121!1.18e-10!102;UBERON:0000924!1.18e-10!102;UBERON:0006601!1.18e-10!102;UBERON:0001049!3.22e-10!52;UBERON:0005068!3.22e-10!52;UBERON:0006241!3.22e-10!52;UBERON:0007135!3.22e-10!52;UBERON:0002791!4.10e-10!29;UBERON:0003528!4.10e-10!29;UBERON:0001893!4.10e-10!29;UBERON:0003056!2.12e-09!49;UBERON:0000956!2.24e-09!21;UBERON:0001869!2.24e-09!21;UBERON:0000203!2.24e-09!21;UBERON:0002619!3.03e-09!17;UBERON:0002021!7.07e-09!10;UBERON:0000411!7.07e-09!10;UBERON:0001950!7.07e-09!10;UBERON:0002020!2.29e-08!34;UBERON:0007811!4.57e-07!86;UBERON:0002346!9.48e-07!71;UBERON:0003075!9.48e-07!71;UBERON:0007284!9.48e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001851,2.06e-13,1;UBERON:0005889,2.06e-13,1;UBERON:0002021,6.49e-12,10;UBERON:0000411,6.49e-12,10;UBERON:0001950,6.49e-12,10;UBERON:0002780,8.16e-12,39;UBERON:0001890,8.16e-12,39;UBERON:0006240,8.16e-12,39;UBERON:0003080,1.59e-11,40;UBERON:0002616,4.79e-10,46;UBERON:0000955,7.77e-10,47;UBERON:0006238,7.77e-10,47;UBERON:0003056,1.93e-09,49;UBERON:0001049,6.63e-09,52;UBERON:0005068,6.63e-09,52;UBERON:0006241,6.63e-09,52;UBERON:0007135,6.63e-09,52;UBERON:0000073,1.40e-08,54;UBERON:0003528,2.15e-07,29;UBERON:0002791,2.15e-07,29;UBERON:0001893,2.15e-07,29;UBERON:0002619,2.79e-07,17;UBERON:0002346,2.95e-07,64;UBERON:0003075,2.95e-07,64;UBERON:0007284,2.95e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122490799214954,0,0,0,0.510749352340751,0.614426133024974,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0,0,10.980014467647,0,0.173824320192276,1.02286182932132,1.24672826735736,2.75810147215188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.14579102687879,0.859265911718438,0.685082519770642,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@Kctd17 | |||
}} |
Revision as of 11:05, 13 September 2013
Short description: | p7@Kctd17 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Kctd17_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -106bp_to_ENSMUST00000159857, ENSMUST00000162517, ENSMUST00000166142_5end |
EntrezGene: | Kctd17 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortex | 2.06e-13 | 1 |
zygote cortex | 2.06e-13 | 1 |
occipital lobe | 6.49e-12 | 10 |
visual cortex | 6.49e-12 | 10 |
neocortex | 6.49e-12 | 10 |
regional part of forebrain | 8.16e-12 | 39 |
forebrain | 8.16e-12 | 39 |
future forebrain | 8.16e-12 | 39 |
anterior neural tube | 1.59e-11 | 40 |
regional part of brain | 4.79e-10 | 46 |
brain | 7.77e-10 | 47 |
future brain | 7.77e-10 | 47 |
pre-chordal neural plate | 1.93e-09 | 49 |
neural tube | 6.63e-09 | 52 |
neural rod | 6.63e-09 | 52 |
future spinal cord | 6.63e-09 | 52 |
neural keel | 6.63e-09 | 52 |
regional part of nervous system | 1.40e-08 | 54 |
brain grey matter | 2.15e-07 | 29 |
regional part of telencephalon | 2.15e-07 | 29 |
telencephalon | 2.15e-07 | 29 |
regional part of cerebral cortex | 2.79e-07 | 17 |
neurectoderm | 2.95e-07 | 64 |
neural plate | 2.95e-07 | 64 |
presumptive neural plate | 2.95e-07 | 64 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.