FFCP PHASE1:Mm9::chr6:52114472..52114489,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1095|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:52114472..52114489,-|id=chr6:52114472..52114489,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!3.09e-10!14;UBERON:0000117!3.09e-10!14;UBERON:0000171!3.09e-10!14;UBERON:0000170!3.09e-10!14;UBERON:0005597!3.09e-10!14;UBERON:0000118!3.09e-10!14;UBERON:0005178!4.94e-10!17;UBERON:0005181!4.94e-10!17;UBERON:0002224!4.94e-10!17;UBERON:0000915!4.94e-10!17;UBERON:0008947!4.94e-10!17;UBERON:0003258!4.94e-10!17;UBERON:0005157!1.01e-09!27;UBERON:0005153!2.68e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.06e-17,20;UBERON:0002048,4.65e-15,14;UBERON:0000117,4.65e-15,14;UBERON:0000171,4.65e-15,14;UBERON:0000170,4.65e-15,14;UBERON:0005597,4.65e-15,14;UBERON:0000118,4.65e-15,14;UBERON:0005178,3.38e-14,17;UBERON:0005181,3.38e-14,17;UBERON:0002224,3.38e-14,17;UBERON:0000915,3.38e-14,17;UBERON:0008947,3.38e-14,17;UBERON:0003258,3.38e-14,17;UBERON:0005153,6.06e-12,17;UBERON:0000310,2.48e-08,6;UBERON:0001443,2.48e-08,6;UBERON:0010313,3.24e-07,3;UBERON:0002342,3.24e-07,3;UBERON:0002005,3.24e-07,3;UBERON:0005428,3.24e-07,3;UBERON:0005062,3.24e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,1.10128051297009,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0.515672092277442,0.606949382578793,0,2.53532561402472,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0.745597783301202,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,1.26679932737549,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756424320671277,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0,0.462801338662135,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,2.55945900642281,1.16118335930219,1.28867461322093,1.00841762311671,0.667134131534611,0.190225626112559,0,0.494096864172033,0.251335208800269,1.1937388322469,0.38992817423824,0,0,0.398282546508734,1.32767530667157,0.456994050438915,1.1270773567308,0.610953983535943,0,0.350679099451593,0.252946148497029,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0.899448449539415,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.923765950833023,5.68474235311454,4.07412441105065,2.8856664581782,1.64283173801951,1.00503754465089,0.952174563544055,1.95133647857799,1.57635144106191,1.7717175171902,3.50800491046472,0.655453258862952,1.55416483679306,1.15719246865209,0,0,0,0,1.28440471990234,1.28932855251423,1.14754461763673,0.252470927204373,3.15508219416257,4.29482618726302,2.36965737506079,0,0,0,0.404810701674894,1.75353514746787,1.18586333383957,0,0,0.35613120733451,0.325773918707152,0,0,0.971122544619926,0.302323556964751,0.377210159511796,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0.492422699235184,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0,1.90934123603023,6.64305586520384,1.21991680276109,0.756037385752609,1.25452977608681,1.31017538247707,1.61837215661785,1.90102948168273,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,4.45995473638361,1.74608627180206,0.77952493786677,0.358053391334963,0,0.360586348559907,0.147689527174577,0.403865799792591,0.228620419965,0.302478555410522,0,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09541311156578,3.19219898720825,1.70733605754134,1.21553358534147,0.838452650511929,0.919217542250071,0.222246727801615,0.824140228955577,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.468207537349412,0.704276676453562,0.574354689556133,0.952587382566147,0.927074607558844,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.929621047115796,1.54325288784913,0.249810577937946,0.701794825336225,0.644613162144895,1.14772999241306,0,0.231867835620421|short_description=p@chr6:52114472..52114489,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1095 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:52114472..52114489,- | |||
|id=chr6:52114472..52114489,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.09e-10!14;UBERON:0000117!3.09e-10!14;UBERON:0000171!3.09e-10!14;UBERON:0000170!3.09e-10!14;UBERON:0005597!3.09e-10!14;UBERON:0000118!3.09e-10!14;UBERON:0005178!4.94e-10!17;UBERON:0005181!4.94e-10!17;UBERON:0002224!4.94e-10!17;UBERON:0000915!4.94e-10!17;UBERON:0008947!4.94e-10!17;UBERON:0003258!4.94e-10!17;UBERON:0005157!1.01e-09!27;UBERON:0005153!2.68e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005157,8.06e-17,20;UBERON:0002048,4.65e-15,14;UBERON:0000117,4.65e-15,14;UBERON:0000171,4.65e-15,14;UBERON:0000170,4.65e-15,14;UBERON:0005597,4.65e-15,14;UBERON:0000118,4.65e-15,14;UBERON:0005178,3.38e-14,17;UBERON:0005181,3.38e-14,17;UBERON:0002224,3.38e-14,17;UBERON:0000915,3.38e-14,17;UBERON:0008947,3.38e-14,17;UBERON:0003258,3.38e-14,17;UBERON:0005153,6.06e-12,17;UBERON:0000310,2.48e-08,6;UBERON:0001443,2.48e-08,6;UBERON:0010313,3.24e-07,3;UBERON:0002342,3.24e-07,3;UBERON:0002005,3.24e-07,3;UBERON:0005428,3.24e-07,3;UBERON:0005062,3.24e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,1.10128051297009,0,0,0,0,0,2.87505128729943,0,0,0,0,0,0.515672092277442,0.606949382578793,0,2.53532561402472,0,0,0,0,0,0,0,0,0,0,1.14260393761521,0.441737081903227,0,0,0,0,0,0,0,0,0,0,0,0,0.294628585473668,0.427115042397309,0.745597783301202,0,0,2.02905142091174,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,1.26679932737549,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0.461230994512117,0.150722640552623,0.470354828542819,0.125666591329675,0,0.86759614151947,0,0.161766849947409,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.756424320671277,0,0.219195732427575,0,0,0,0.398068533636986,0,0,0,0.621377317606506,0.703578179943289,0.540186184383045,0.710234206755631,0,0.462801338662135,0,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0,0.219550115291051,0,0,0,0,0,2.55945900642281,1.16118335930219,1.28867461322093,1.00841762311671,0.667134131534611,0.190225626112559,0,0.494096864172033,0.251335208800269,1.1937388322469,0.38992817423824,0,0,0.398282546508734,1.32767530667157,0.456994050438915,1.1270773567308,0.610953983535943,0,0.350679099451593,0.252946148497029,0,0,0.123397163921801,0,0.500535317148282,0.393117990226406,0.899448449539415,0.202860121388503,0,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0,0.482443521363367,0.923765950833023,5.68474235311454,4.07412441105065,2.8856664581782,1.64283173801951,1.00503754465089,0.952174563544055,1.95133647857799,1.57635144106191,1.7717175171902,3.50800491046472,0.655453258862952,1.55416483679306,1.15719246865209,0,0,0,0,1.28440471990234,1.28932855251423,1.14754461763673,0.252470927204373,3.15508219416257,4.29482618726302,2.36965737506079,0,0,0,0.404810701674894,1.75353514746787,1.18586333383957,0,0,0.35613120733451,0.325773918707152,0,0,0.971122544619926,0.302323556964751,0.377210159511796,1.18120757152309,0.922305443831782,0.258428293168221,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.484393280087717,0.120625849856312,0.238744688006273,0.492422699235184,0,0,0,0.206386867963223,0,0.188368457004691,0,0,0,0.139951452323658,0,1.90934123603023,6.64305586520384,1.21991680276109,0.756037385752609,1.25452977608681,1.31017538247707,1.61837215661785,1.90102948168273,0.26175594198403,0,0,0,0.149516546043979,0,0,0,0.168956125490778,0.117357238645754,0,0.104859344425711,0,0,0,4.45995473638361,1.74608627180206,0.77952493786677,0.358053391334963,0,0.360586348559907,0.147689527174577,0.403865799792591,0.228620419965,0.302478555410522,0,0.384847366561318,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.09541311156578,3.19219898720825,1.70733605754134,1.21553358534147,0.838452650511929,0.919217542250071,0.222246727801615,0.824140228955577,0.962757628775446,1.26348605881899,0.25347929989024,0.565879024158229,0.468207537349412,0.704276676453562,0.574354689556133,0.952587382566147,0.927074607558844,0.192909220463705,0,0.441596760403192,0.685738504770831,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.73171189149109,0.526139422875686,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.929621047115796,1.54325288784913,0.249810577937946,0.701794825336225,0.644613162144895,1.14772999241306,0,0.231867835620421 | |||
|short_description=p@chr6:52114472..52114489,- | |||
}} |
Revision as of 10:16, 14 September 2013
Short description: | p@chr6:52114472..52114489, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:52114472..52114489, - |
Coexpression cluster: | MCL_coexpression_mm9:1095 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial fold | 8.06e-17 | 20 |
lung | 4.65e-15 | 14 |
respiratory tube | 4.65e-15 | 14 |
respiration organ | 4.65e-15 | 14 |
pair of lungs | 4.65e-15 | 14 |
lung primordium | 4.65e-15 | 14 |
lung bud | 4.65e-15 | 14 |
thoracic cavity element | 3.38e-14 | 17 |
thoracic segment organ | 3.38e-14 | 17 |
thoracic cavity | 3.38e-14 | 17 |
thoracic segment of trunk | 3.38e-14 | 17 |
respiratory primordium | 3.38e-14 | 17 |
endoderm of foregut | 3.38e-14 | 17 |
epithelial bud | 6.06e-12 | 17 |
breast | 2.48e-08 | 6 |
chest | 2.48e-08 | 6 |
neural crest-derived structure | 3.24e-07 | 3 |
neural crest | 3.24e-07 | 3 |
enteric nervous system | 3.24e-07 | 3 |
vagal neural crest | 3.24e-07 | 3 |
neural fold | 3.24e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.