FFCP PHASE1:Mm9::chr1:53880789..53880807,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:53880789..53880807,-|id=chr1:53880789..53880807,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,3.30e-15,9|ontology_enrichment_disease=DOID:0060100!4.65e-12!3;DOID:4045!4.65e-12!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-44,3;DOID:4045,8.97e-44,3;DOID:0050686,2.23e-22,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.30e-15,9;UBERON:0002036,3.30e-15,9;UBERON:0002385,3.30e-15,9;UBERON:0000486,3.30e-15,9;UBERON:0007503,3.30e-15,9;UBERON:0001015,3.30e-15,9;UBERON:0002329,3.30e-15,9;UBERON:0003082,3.30e-15,9;UBERON:0003059,3.30e-15,9;UBERON:0007282,3.30e-15,9;UBERON:0004290,3.30e-15,9;UBERON:0009618,3.30e-15,9;UBERON:0000383,9.08e-14,10;UBERON:0007524,1.37e-12,11;UBERON:0003077,1.37e-12,11;UBERON:0007285,1.37e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.684802919724823,0,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,10.0447591376858,8.5946887897618,8.37637990358077,45.2938245783881,12.294818729252,6.79714494243615,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.370389054739423,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr1:53880789..53880807,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:53880789..53880807,- | |||
|id=chr1:53880789..53880807,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.30e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!4.65e-12!3;DOID:4045!4.65e-12!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-44,3;DOID:4045,8.97e-44,3;DOID:0050686,2.23e-22,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.30e-15,9;UBERON:0002036,3.30e-15,9;UBERON:0002385,3.30e-15,9;UBERON:0000486,3.30e-15,9;UBERON:0007503,3.30e-15,9;UBERON:0001015,3.30e-15,9;UBERON:0002329,3.30e-15,9;UBERON:0003082,3.30e-15,9;UBERON:0003059,3.30e-15,9;UBERON:0007282,3.30e-15,9;UBERON:0004290,3.30e-15,9;UBERON:0009618,3.30e-15,9;UBERON:0000383,9.08e-14,10;UBERON:0007524,1.37e-12,11;UBERON:0003077,1.37e-12,11;UBERON:0007285,1.37e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0.684802919724823,0,0,0,0,0.157731082679119,0.274228867211478,0,0,0,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,10.0447591376858,8.5946887897618,8.37637990358077,45.2938245783881,12.294818729252,6.79714494243615,0,0,0,0,0,0,0.194429899074283,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.370389054739423,0,0,0.228778173206523,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:53880789..53880807,- | |||
}} |
Revision as of 20:31, 13 September 2013
Short description: | p@chr1:53880789..53880807, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:53880789..53880807, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.30e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.30e-15 | 9 |
striated muscle tissue | 3.30e-15 | 9 |
muscle tissue | 3.30e-15 | 9 |
multilaminar epithelium | 3.30e-15 | 9 |
epithelial vesicle | 3.30e-15 | 9 |
musculature | 3.30e-15 | 9 |
somite | 3.30e-15 | 9 |
myotome | 3.30e-15 | 9 |
presomitic mesoderm | 3.30e-15 | 9 |
presumptive segmental plate | 3.30e-15 | 9 |
dermomyotome | 3.30e-15 | 9 |
trunk paraxial mesoderm | 3.30e-15 | 9 |
musculature of body | 9.08e-14 | 10 |
dense mesenchyme tissue | 1.37e-12 | 11 |
paraxial mesoderm | 1.37e-12 | 11 |
presumptive paraxial mesoderm | 1.37e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.97e-44 | 3 |
muscle cancer | 8.97e-44 | 3 |
organ system cancer | 2.23e-22 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.