FFCP PHASE1:Mm9::chr9:107537661..107537684,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14678|HGNC=|MCL_coexpression_id=116|UniProt=P08752|association_with_transcript=0bp_to_ENSMUST00000055704,NM_008138,uc009rml.1,uc009rmm.1_5end|description=CAGE_peak_1_at_Gnai2_5end|id=chr9:107537661..107537684,-|ontology_enrichment_celltype=CL:0000144!2.57e-07!121;CL:0000012!2.57e-07!121;CL:0000219!2.93e-07!54|ontology_enrichment_celltype_v019_2=CL:0000219,2.93e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003081!2.30e-14!88;UBERON:0002193!6.83e-12!48;UBERON:0002390!5.72e-11!45;UBERON:0003061!5.72e-11!45;UBERON:0002204!1.56e-10!32;UBERON:0002371!6.86e-08!16;UBERON:0001474!8.18e-08!22;UBERON:0004765!8.18e-08!22;UBERON:0001434!8.18e-08!22;UBERON:0004872!9.51e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.30e-14,87;UBERON:0002193,6.83e-12,48;UBERON:0002405,6.83e-12,48;UBERON:0002390,5.72e-11,45;UBERON:0003061,5.72e-11,45;UBERON:0002204,1.56e-10,32;UBERON:0000926,1.57e-08,120;UBERON:0004120,1.57e-08,120;UBERON:0006603,1.57e-08,120;UBERON:0002371,6.86e-08,16;UBERON:0001474,8.18e-08,22;UBERON:0004765,8.18e-08,22;UBERON:0001434,8.18e-08,22;UBERON:0004872,9.51e-07,33|phase1_expression=284.264203611009,642.463725464064,616.523969372821,557.744005649795,551.987094400875,289.927502591834,353.45592522103,474.528213647793,253.842066039455,307.794852113421,59.5838529424757,63.8177271962691,440.499478112992,453.012525335245,327.780005626612,381.058453227652,426.732745658169,523.667194494675,461.252954649705,421.418924235444,225.619848770788,368.468719906485,333.813330519559,385.58173893211,390.684005657391,457.662875399671,420.854470247416,379.013898294479,340.711991085278,215.485760944741,296.453692746142,97.1596930393236,86.7241350494244,63.3926724061755,105.719692828967,100.904429732605,96.9804442246253,2600.33702176841,1590.01742610593,2048.54841016947,2705.86484494267,2605.13547963151,2574.66140212421,372.780478025684,343.870550696593,342.681786285859,1070.31135906812,898.26364428744,1150.05716661496,1058.4763705604,712.530886073095,966.017232532609,437.744819204634,520.084655822134,426.503031111787,640.061476857436,616.046895868327,566.723629412909,272.722589238738,312.104677770499,295.36543403388,738.00339084657,722.107374442245,1644.56673333176,1562.40885285582,1812.4347732275,1230.75725400961,1712.46098681817,230.502008161746,242.200653367053,254.913853157875,348.49420097264,334.836708082646,270.704666265048,341.689104180013,306.099855941137,199.309744608894,209.151859783537,214.434720425716,285.79758551133,297.060378777024,263.582165501721,223.625582200106,261.1218510547,278.704003944902,264.576469755354,266.946901498318,235.795298969005,356.367465825964,631.022526891659,584.366809222582,323.519377745001,52.3577926954968,77.7172595958457,94.217580529912,81.9889203388124,224.991961051066,523.561950959793,416.177179373796,435.66769537125,280.560092195148,565.919765397142,1019.22095882658,1607.01074912653,208.69736353481,219.15628363596,217.375511356357,177.555932963138,636.469318004748,272.094440905824,287.638671778253,268.234086392996,249.987199025567,188.855468612436,225.887906407689,246.809185371483,483.018966952967,307.996630239412,1066.84032565155,361.225375932565,404.581661819441,380.142198458014,497.666002452386,149.318206475889,107.236713888489,320.598604286782,343.270331709462,380.938234180814,380.448259856756,270.2223134863,242.017818891053,230.32442742288,193.466468374004,177.210811929919,257.657175253855,206.533127885255,332.301844243582,439.529827165459,272.940579108369,142.890020146916,334.01917708526,361.176206064986,402.618922244761,296.737786318523,311.471093114779,356.924824713591,313.432268652293,197.908078615347,300.717350141315,273.825604083002,293.134572857139,311.477135779584,260.25222527516,304.372393540374,263.19535246576,247.399593655387,515.424479487914,406.60969324125,446.420857550476,320.00931856735,307.463664635217,309.526683651485,405.543732057465,386.838479615396,328.280416224341,366.008429037142,413.677584958213,357.885774355375,362.525349359397,388.912722403377,379.320959865059,320.177972461478,409.021864787227,397.922031624502,201.878350621562,241.722934478939,471.50760331788,305.969305629721,278.127878697945,254.995865702762,270.106198931108,245.247165941985,261.961335649257,306.833934919558,290.886314726786,303.04607669218,297.078216801919,362.697648531018,336.89794254184,333.462000610716,255.042898852139,266.650164887598,370.042074759462,245.862799136136,316.708737241356,249.065573954819,260.478190266121,257.047779898017,275.901011473135,220.086730637587,211.32028767449,211.379341798044,163.938302779193,199.713591542165,223.880695433938,217.891386900923,259.660955377284,270.600773242212,283.907824736283,311.287220721777,211.748606168196,242.986850671452,274.597274467247,335.298993849322,267.728323532293,231.109673321607,158.946108380414,146.1803869731,588.993170251136,230.990030948221,360.641492866203,307.408350338866,312.372720471996,410.892849504774,508.937304214297,451.148993847231,592.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| ||
|EntrezGene=14678 | |||
|HGNC= | |||
|MCL_coexpression_id=116 | |||
|UniProt=P08752 | |||
|association_with_transcript=0bp_to_ENSMUST00000055704,NM_008138,uc009rml.1,uc009rmm.1_5end | |||
|description=CAGE_peak_1_at_Gnai2_5end | |||
|id=chr9:107537661..107537684,- | |||
|ontology_enrichment_celltype=CL:0000144!2.57e-07!121;CL:0000012!2.57e-07!121;CL:0000219!2.93e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.93e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.30e-14!88;UBERON:0002193!6.83e-12!48;UBERON:0002390!5.72e-11!45;UBERON:0003061!5.72e-11!45;UBERON:0002204!1.56e-10!32;UBERON:0002371!6.86e-08!16;UBERON:0001474!8.18e-08!22;UBERON:0004765!8.18e-08!22;UBERON:0001434!8.18e-08!22;UBERON:0004872!9.51e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,7.30e-14,87;UBERON:0002193,6.83e-12,48;UBERON:0002405,6.83e-12,48;UBERON:0002390,5.72e-11,45;UBERON:0003061,5.72e-11,45;UBERON:0002204,1.56e-10,32;UBERON:0000926,1.57e-08,120;UBERON:0004120,1.57e-08,120;UBERON:0006603,1.57e-08,120;UBERON:0002371,6.86e-08,16;UBERON:0001474,8.18e-08,22;UBERON:0004765,8.18e-08,22;UBERON:0001434,8.18e-08,22;UBERON:0004872,9.51e-07,33 | |||
|phase1_expression=284.264203611009,642.463725464064,616.523969372821,557.744005649795,551.987094400875,289.927502591834,353.45592522103,474.528213647793,253.842066039455,307.794852113421,59.5838529424757,63.8177271962691,440.499478112992,453.012525335245,327.780005626612,381.058453227652,426.732745658169,523.667194494675,461.252954649705,421.418924235444,225.619848770788,368.468719906485,333.813330519559,385.58173893211,390.684005657391,457.662875399671,420.854470247416,379.013898294479,340.711991085278,215.485760944741,296.453692746142,97.1596930393236,86.7241350494244,63.3926724061755,105.719692828967,100.904429732605,96.9804442246253,2600.33702176841,1590.01742610593,2048.54841016947,2705.86484494267,2605.13547963151,2574.66140212421,372.780478025684,343.870550696593,342.681786285859,1070.31135906812,898.26364428744,1150.05716661496,1058.4763705604,712.530886073095,966.017232532609,437.744819204634,520.084655822134,426.503031111787,640.061476857436,616.046895868327,566.723629412909,272.722589238738,312.104677770499,295.36543403388,738.00339084657,722.107374442245,1644.56673333176,1562.40885285582,1812.4347732275,1230.75725400961,1712.46098681817,230.502008161746,242.200653367053,254.913853157875,348.49420097264,334.836708082646,270.704666265048,341.689104180013,306.099855941137,199.309744608894,209.151859783537,214.434720425716,285.79758551133,297.060378777024,263.582165501721,223.625582200106,261.1218510547,278.704003944902,264.576469755354,266.946901498318,235.795298969005,356.367465825964,631.022526891659,584.366809222582,323.519377745001,52.3577926954968,77.7172595958457,94.217580529912,81.9889203388124,224.991961051066,523.561950959793,416.177179373796,435.66769537125,280.560092195148,565.919765397142,1019.22095882658,1607.01074912653,208.69736353481,219.15628363596,217.375511356357,177.555932963138,636.469318004748,272.094440905824,287.638671778253,268.234086392996,249.987199025567,188.855468612436,225.887906407689,246.809185371483,483.018966952967,307.996630239412,1066.84032565155,361.225375932565,404.581661819441,380.142198458014,497.666002452386,149.318206475889,107.236713888489,320.598604286782,343.270331709462,380.938234180814,380.448259856756,270.2223134863,242.017818891053,230.32442742288,193.466468374004,177.210811929919,257.657175253855,206.533127885255,332.301844243582,439.529827165459,272.940579108369,142.890020146916,334.01917708526,361.176206064986,402.618922244761,296.737786318523,311.471093114779,356.924824713591,313.432268652293,197.908078615347,300.717350141315,273.825604083002,293.134572857139,311.477135779584,260.25222527516,304.372393540374,263.19535246576,247.399593655387,515.424479487914,406.60969324125,446.420857550476,320.00931856735,307.463664635217,309.526683651485,405.543732057465,386.838479615396,328.280416224341,366.008429037142,413.677584958213,357.885774355375,362.525349359397,388.912722403377,379.320959865059,320.177972461478,409.021864787227,397.922031624502,201.878350621562,241.722934478939,471.50760331788,305.969305629721,278.127878697945,254.995865702762,270.106198931108,245.247165941985,261.961335649257,306.833934919558,290.886314726786,303.04607669218,297.078216801919,362.697648531018,336.89794254184,333.462000610716,255.042898852139,266.650164887598,370.042074759462,245.862799136136,316.708737241356,249.065573954819,260.478190266121,257.047779898017,275.901011473135,220.086730637587,211.32028767449,211.379341798044,163.938302779193,199.713591542165,223.880695433938,217.891386900923,259.660955377284,270.600773242212,283.907824736283,311.287220721777,211.748606168196,242.986850671452,274.597274467247,335.298993849322,267.728323532293,231.109673321607,158.946108380414,146.1803869731,588.993170251136,230.990030948221,360.641492866203,307.408350338866,312.372720471996,410.892849504774,508.937304214297,451.148993847231,592.23523640696,571.15743460419,574.993895778898,543.206888282671,533.941963929349,500.196444574867,823.320410308427,635.825744384072,184.411602382139,209.435990445292,264.426821709893,207.113050208423,340.820751438108,262.317293365344,374.823764666513,364.66978717306,358.033687031912,400.511705368477,404.602392133628,396.590219635154,348.946824843759,384.608709011286,384.615007941967,199.540537497942,311.132666776525,400.647608251324,297.594474738983,372.83247791793,134.072589723362,278.226609033609,226.742667723563,210.483269007582,390.093800495501,293.908001434395,286.080120537221,264.289021330147,251.687149139613,159.598562757587,161.290471119748,165.016869197099,264.862013276447,333.833268334049,442.536057220803,373.803789095097,333.399639247474,358.164585744958,341.274668728799,374.491887410957,400.819277372817,384.26337654697,265.075134462064,244.196540606332,235.253669695934,246.016420781948,246.981379742489,216.009424064501,313.633380213719,284.256987982111,524.744474930206,460.655489293913,368.537109465726,444.549558531071,493.739550528343,444.973546886687,405.228577105351,425.732317968568,440.305116540894,285.446514786519,316.968665568298,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| |||
|short_description=p1@Gnai2 | |||
}} |
Revision as of 16:46, 14 September 2013
Short description: | p1@Gnai2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gnai2_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000055704, NM_008138, uc009rml.1, uc009rmm.1_5end |
EntrezGene: | Gnai2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.93e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 7.30e-14 | 87 |
hemolymphoid system | 6.83e-12 | 48 |
immune system | 6.83e-12 | 48 |
hematopoietic system | 5.72e-11 | 45 |
blood island | 5.72e-11 | 45 |
musculoskeletal system | 1.56e-10 | 32 |
mesoderm | 1.57e-08 | 120 |
mesoderm-derived structure | 1.57e-08 | 120 |
presumptive mesoderm | 1.57e-08 | 120 |
bone marrow | 6.86e-08 | 16 |
bone element | 8.18e-08 | 22 |
skeletal element | 8.18e-08 | 22 |
skeletal system | 8.18e-08 | 22 |
splanchnic layer of lateral plate mesoderm | 9.51e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.