FFCP PHASE1:Mm9::chr11:75274629..75274684,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:75274629..75274684,-|id=chr11:75274629..75274684,-|ontology_enrichment_celltype=CL:0000063!9.74e-15!66;CL:0000066!1.00e-12!25;CL:0000144!1.37e-11!121;CL:0000012!1.37e-11!121;CL:0000223!2.81e-11!20;CL:0002371!2.99e-10!118;CL:0002076!1.04e-09!15;CL:0000548!7.26e-09!115;CL:0000004!7.26e-09!115;CL:0000255!7.26e-09!115;CL:0000219!2.29e-07!54|ontology_enrichment_celltype_v019_2=CL:0000223,7.68e-19,20;CL:0000066,7.76e-19,25;CL:0002076,4.23e-17,15;CL:0002563,1.81e-10,9;CL:0002251,1.81e-10,9;CL:0000219,5.35e-10,54;CL:0000034,7.78e-10,97;CL:0002321,2.61e-09,70;CL:0000723,1.21e-08,91;CL:0000048,1.21e-08,91;CL:0000355,1.63e-08,9;CL:0002320,2.27e-08,46;CL:0000134,2.27e-08,46;CL:0000075,2.99e-08,7;CL:0000239,8.58e-08,6;CL:0000677,8.58e-08,6;CL:0000584,8.58e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000490!3.80e-08!66|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.81e-10,9;UBERON:0004808,1.81e-10,9;UBERON:0001277,1.81e-10,9;UBERON:0000490,7.30e-10,66;UBERON:0000485,1.06e-09,11;UBERON:0000383,2.57e-09,10;UBERON:0001134,1.63e-08,9;UBERON:0002036,1.63e-08,9;UBERON:0002385,1.63e-08,9;UBERON:0000486,1.63e-08,9;UBERON:0007503,1.63e-08,9;UBERON:0001015,1.63e-08,9;UBERON:0002329,1.63e-08,9;UBERON:0003082,1.63e-08,9;UBERON:0003059,1.63e-08,9;UBERON:0007282,1.63e-08,9;UBERON:0004290,1.63e-08,9;UBERON:0009618,1.63e-08,9;UBERON:0002384,2.27e-08,46;UBERON:0007524,5.36e-08,11;UBERON:0003077,5.36e-08,11;UBERON:0007285,5.36e-08,11;UBERON:0002204,6.94e-07,32|phase1_expression=0.80074423552397,3.48975407639361,3.18499467572675,6.95667686005709,4.50806156951712,2.51818907867835,2.33612640595526,0.645616617207881,3.23814060948833,4.21316147379588,2.05461561870606,1.43589886191606,0.342401459862411,0.262261207256992,0.333109761815663,0.404950534779652,0,0.630924330716475,0.548457734422955,0,0.425216450755349,0.992909512008853,0.783599367416806,0.639969691173627,0.68822784320151,2.29692785646008,1.7230479846363,0.861884930743556,0,0.504060259519861,0.443461021310609,1.27006134691926,0.61506478758457,0,2.02196133825892,2.32728503501889,3.06254034393554,25.5304294749514,17.9707129240474,13.6116173433188,69.4113155876597,16.3930916390027,13.5942898848723,4.28049181116963,3.4468156614635,2.56965453026354,2.34717403304412,1.74420125104357,1.09843091367236,0.58328969722285,1.1198913730029,0,0.503347818173209,0,0,1.28629718017973,1.43266719969378,0.515672092277442,0.404632921719196,0,0,2.37191172448392,0.889294796111139,1.3498495759221,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.908714319998209,1.20914496170857,14.4932244350839,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,3.57903677413921,1.29893002301434,1.7666978725517,1.12674735821344,7.69958864485907,7.64415719119937,7.11066703153331,2.59789249213457,2.28023878927589,3.53867111510348,0.79928715803342,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,1.20578112442098,0.470354828542819,0.753999547978053,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.969750506270444,1.86391761218122,0,0.209446706813455,0.766371165625774,4.07371423320129,1.19980546198682,4.19331749341113,0.149790639404823,0.457500602818626,0.125654352112864,0,0.255715457330331,0.62336413367868,0,0.203678727700633,0.497627882440372,1.51633655060205,0.841767423545896,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,1.23165786914764,0.219195732427575,0.278047249225598,1.39300866608867,0.205782136407943,0,2.1066395619397,4.11756651383544,3.6941254921427,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.656669856316381,0.405344047729279,1.02339991197733,1.3173006917463,0.536825675041487,0,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0,0.252946148497029,0.295220295959204,0.31399745568275,0.616985819609003,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.72353147925725,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,0.717589654087649,0.482443521363367,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.780534591431195,0.157635144106191,0,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,1.50791283939272,3.26343410291226,0,0.551873492609465,0.16055058998779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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:75274629..75274684,- | |||
|id=chr11:75274629..75274684,- | |||
|ontology_enrichment_celltype=CL:0000063!9.74e-15!66;CL:0000066!1.00e-12!25;CL:0000144!1.37e-11!121;CL:0000012!1.37e-11!121;CL:0000223!2.81e-11!20;CL:0002371!2.99e-10!118;CL:0002076!1.04e-09!15;CL:0000548!7.26e-09!115;CL:0000004!7.26e-09!115;CL:0000255!7.26e-09!115;CL:0000219!2.29e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,7.68e-19,20;CL:0000066,7.76e-19,25;CL:0002076,4.23e-17,15;CL:0002563,1.81e-10,9;CL:0002251,1.81e-10,9;CL:0000219,5.35e-10,54;CL:0000034,7.78e-10,97;CL:0002321,2.61e-09,70;CL:0000723,1.21e-08,91;CL:0000048,1.21e-08,91;CL:0000355,1.63e-08,9;CL:0002320,2.27e-08,46;CL:0000134,2.27e-08,46;CL:0000075,2.99e-08,7;CL:0000239,8.58e-08,6;CL:0000677,8.58e-08,6;CL:0000584,8.58e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000490!3.80e-08!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.81e-10,9;UBERON:0004808,1.81e-10,9;UBERON:0001277,1.81e-10,9;UBERON:0000490,7.30e-10,66;UBERON:0000485,1.06e-09,11;UBERON:0000383,2.57e-09,10;UBERON:0001134,1.63e-08,9;UBERON:0002036,1.63e-08,9;UBERON:0002385,1.63e-08,9;UBERON:0000486,1.63e-08,9;UBERON:0007503,1.63e-08,9;UBERON:0001015,1.63e-08,9;UBERON:0002329,1.63e-08,9;UBERON:0003082,1.63e-08,9;UBERON:0003059,1.63e-08,9;UBERON:0007282,1.63e-08,9;UBERON:0004290,1.63e-08,9;UBERON:0009618,1.63e-08,9;UBERON:0002384,2.27e-08,46;UBERON:0007524,5.36e-08,11;UBERON:0003077,5.36e-08,11;UBERON:0007285,5.36e-08,11;UBERON:0002204,6.94e-07,32 | |||
|phase1_expression=0.80074423552397,3.48975407639361,3.18499467572675,6.95667686005709,4.50806156951712,2.51818907867835,2.33612640595526,0.645616617207881,3.23814060948833,4.21316147379588,2.05461561870606,1.43589886191606,0.342401459862411,0.262261207256992,0.333109761815663,0.404950534779652,0,0.630924330716475,0.548457734422955,0,0.425216450755349,0.992909512008853,0.783599367416806,0.639969691173627,0.68822784320151,2.29692785646008,1.7230479846363,0.861884930743556,0,0.504060259519861,0.443461021310609,1.27006134691926,0.61506478758457,0,2.02196133825892,2.32728503501889,3.06254034393554,25.5304294749514,17.9707129240474,13.6116173433188,69.4113155876597,16.3930916390027,13.5942898848723,4.28049181116963,3.4468156614635,2.56965453026354,2.34717403304412,1.74420125104357,1.09843091367236,0.58328969722285,1.1198913730029,0,0.503347818173209,0,0,1.28629718017973,1.43266719969378,0.515672092277442,0.404632921719196,0,0,2.37191172448392,0.889294796111139,1.3498495759221,0,1.4209602298922,0.599200221036809,0.384218305321555,0,0,0,0,0,0.122490799214954,0,0,0,0,0.46081959976873,0,0.0914876436024097,0,0.279182999001381,0,0.15279824777681,0,0,0,0.908714319998209,1.20914496170857,14.4932244350839,3.44169550792555,0.679971333707751,1.07940638327563,1.29955283489534,1.34408066129201,0.280888840263504,3.57903677413921,1.29893002301434,1.7666978725517,1.12674735821344,7.69958864485907,7.64415719119937,7.11066703153331,2.59789249213457,2.28023878927589,3.53867111510348,0.79928715803342,0.258937883647172,0.148442139064825,0.693941307064543,0.304465478312141,0.691846491768175,1.20578112442098,0.470354828542819,0.753999547978053,0.494389935468748,0.433798070759735,0,0.323533699894818,0,0.969750506270444,1.86391761218122,0,0.209446706813455,0.766371165625774,4.07371423320129,1.19980546198682,4.19331749341113,0.149790639404823,0.457500602818626,0.125654352112864,0,0.255715457330331,0.62336413367868,0,0.203678727700633,0.497627882440372,1.51633655060205,0.841767423545896,0.390361328888111,0.229902104433473,0.540186389416048,0.452114453507145,0.136072998302656,0.2562274405697,0.187403449119458,0,0.215567992932842,0.189106080167819,1.23165786914764,0.219195732427575,0.278047249225598,1.39300866608867,0.205782136407943,0,2.1066395619397,4.11756651383544,3.6941254921427,0.207125772535502,0,0.180062061461015,0.23674473558521,0.196764231747404,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.656669856316381,0.405344047729279,1.02339991197733,1.3173006917463,0.536825675041487,0,0.102904612379284,0.991256348951394,0.264450566663544,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.397912944082302,0.58489226135736,0,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0,0.252946148497029,0.295220295959204,0.31399745568275,0.616985819609003,0,0.333690211432188,0.589676985339609,0.674586337154561,0.405720242777006,0.72353147925725,0,0,0.162135226775035,0,0,0,0.312037673114561,1.26289438973556,0.717589654087649,0.482443521363367,1.10851914099963,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0.780534591431195,0.157635144106191,0,0.159454768657487,0.655453258862952,0.690739927463582,0.867894351489069,1.50791283939272,3.26343410291226,0,0.551873492609465,0.160550589987792,0,0.819674726883377,1.76729649043061,0.631016438832513,0.390438744296638,0.430846795465598,0.716906393857656,1.55959071857676,0.849229592366497,1.21443210502468,0.292255857911312,1.18586333383957,0,0.425820255624806,0.890328018336276,0.162886959353576,0.329940245945071,0,0.242780636154981,0,0,0.590603785761546,0,0.775284879504663,0,0,0.632073515871632,0,0,2.7235168460303,0.36012218806262,0,0.857348140126369,1.06404140185364,0.535106452806212,0.822745103010605,1.2178597964584,0.469343416127421,1.0591603543191,0.441056796109924,0.65954501176592,0.161464426695906,0.663442174209714,0.358117032009409,0,0.291480836629851,0.18542530201051,0.683483523191411,0.206386867963223,0.370389054739423,0.376736914009382,0.410082683163076,0.686334519619568,3.73952545986482,3.63873776041511,3.45499934511059,0,0.158167996790568,0.203319467126849,0.432021363287205,0.209088296014469,0.655087691238533,0.269728692769641,0.495920734352016,1.04702376793612,0.259229946583586,0.621339313086926,0,0,0.330916980914195,0.194451188344048,0.258319646955462,1.18269287843545,0.234714477291508,0.13020438484395,0.314578033277133,0.724752362478018,0.288030006257865,0.948033361884535,0.608175645870493,0.513554785824136,0.129920822977795,0.537080087002444,0,0.240390899039938,0.886137163047463,0.605798699688886,0.381034033274999,0.100826185136841,0.38983152295901,0.769694733122636,0.584384510907845,0.906921534460845,0.665957860122194,0.897138566094757,0.839423081820392,0.579568782096571,0.187682475451182,0.549454872801795,0.214368379079066,0,0,0,0,0.171853182343688,0,0,0,0,0.906284817968409,0,0.31136204275253,1.99512436700516,0.512200817262403,0.486213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| |||
|short_description=p@chr11:75274629..75274684,- | |||
}} | |||
Revision as of 20:53, 12 September 2013
| Short description: | p@chr11:75274629..75274684, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr11:75274629..75274684, - |
| Coexpression cluster: | MCL_coexpression_mm9:6 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endodermal cell | 7.68e-19 | 20 |
| epithelial cell | 7.76e-19 | 25 |
| endo-epithelial cell | 4.23e-17 | 15 |
| intestinal epithelial cell | 1.81e-10 | 9 |
| epithelial cell of alimentary canal | 1.81e-10 | 9 |
| motile cell | 5.35e-10 | 54 |
| stem cell | 7.78e-10 | 97 |
| embryonic cell | 2.61e-09 | 70 |
| somatic stem cell | 1.21e-08 | 91 |
| multi fate stem cell | 1.21e-08 | 91 |
| multi-potent skeletal muscle stem cell | 1.63e-08 | 9 |
| connective tissue cell | 2.27e-08 | 46 |
| mesenchymal cell | 2.27e-08 | 46 |
| columnar/cuboidal epithelial cell | 2.99e-08 | 7 |
| brush border epithelial cell | 8.58e-08 | 6 |
| gut absorptive cell | 8.58e-08 | 6 |
| enterocyte | 8.58e-08 | 6 |
| Ontology term | p-value | n |
|---|---|---|
| epithelium of mucosa | 1.81e-10 | 9 |
| gastrointestinal system epithelium | 1.81e-10 | 9 |
| intestinal epithelium | 1.81e-10 | 9 |
| unilaminar epithelium | 7.30e-10 | 66 |
| simple columnar epithelium | 1.06e-09 | 11 |
| musculature of body | 2.57e-09 | 10 |
| skeletal muscle tissue | 1.63e-08 | 9 |
| striated muscle tissue | 1.63e-08 | 9 |
| muscle tissue | 1.63e-08 | 9 |
| multilaminar epithelium | 1.63e-08 | 9 |
| epithelial vesicle | 1.63e-08 | 9 |
| musculature | 1.63e-08 | 9 |
| somite | 1.63e-08 | 9 |
| myotome | 1.63e-08 | 9 |
| presomitic mesoderm | 1.63e-08 | 9 |
| presumptive segmental plate | 1.63e-08 | 9 |
| dermomyotome | 1.63e-08 | 9 |
| trunk paraxial mesoderm | 1.63e-08 | 9 |
| connective tissue | 2.27e-08 | 46 |
| dense mesenchyme tissue | 5.36e-08 | 11 |
| paraxial mesoderm | 5.36e-08 | 11 |
| presumptive paraxial mesoderm | 5.36e-08 | 11 |
| musculoskeletal system | 6.94e-07 | 32 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
