FFCP PHASE1:Mm9::chr15:97191697..97191715,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=239647|HGNC=|MCL_coexpression_id=657|UniProt=|association_with_transcript=66bp_to_uc007xku.1_5end|description=CAGE_peak_5_at_Fam113b_5end|id=chr15:97191697..97191715,+|ontology_enrichment_celltype=CL:0000988!4.25e-09!32;CL:0002032!4.25e-09!32;CL:0000037!4.25e-09!32;CL:0000566!4.25e-09!32;CL:0000837!4.25e-09!32|ontology_enrichment_celltype_v019_2=CL:0000049,9.59e-09,19;CL:0000988,4.70e-08,32;CL:0002032,4.70e-08,32;CL:0000037,4.70e-08,32;CL:0000837,4.70e-08,32;CL:0002320,5.07e-08,46;CL:0000134,5.07e-08,46;CL:0002092,2.06e-07,3;CL:0002540,2.06e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,3.30e-08,3;DOID:4045,3.30e-08,3|ontology_enrichment_uberon=UBERON:0002405!3.11e-12!70;UBERON:0002193!1.76e-10!48;UBERON:0002390!3.21e-10!45;UBERON:0003061!3.21e-10!45;UBERON:0001474!1.84e-09!22;UBERON:0004765!1.84e-09!22;UBERON:0001434!1.84e-09!22;UBERON:0002371!5.51e-08!16;UBERON:0002204!6.43e-08!32;UBERON:0000926!9.43e-07!193;UBERON:0004120!9.43e-07!193;UBERON:0006603!9.43e-07!193|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.32e-11,32;UBERON:0001474,1.42e-10,22;UBERON:0004765,1.42e-10,22;UBERON:0001434,1.42e-10,22;UBERON:0002371,3.00e-10,16;UBERON:0002384,5.07e-08,46|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.468129052643987,0.513653904676515,0.159544317990673,0.513602189793617,0.611942816932982,0.999329285446988,1.01237633694913,1.39912375625629,0.157731082679119,0.822686601634433,0.84877930359606,0,2.38298282882125,1.82839852397255,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,7.813353445238,3.66466620781659,5.88231488031014,3.41522742479223,8.25367600152961,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,3.5995988691256,1.97773272513395,1.4209602298922,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,4.42305275974937,0.485300549842228,0.883366073841574,1.45462575940567,0,0,0,0,4.55297473122497,8.39863823390771,5.33694953706872,0,0,0,0,0,0,0,0.407357455401265,1.49288364732112,0.505445516867349,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,9.83098462238529,7.46308930632674,8.52490498186778,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,1.57247196090562,1.57403478669398,0.608580364165509,0,0.50925170356284,1.15078454980324,1.13494658742525,1.09824565275233,1.43768206527355,1.86070473834252,0,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,2.71952841909355,1.96705709207614,1.10374698521893,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,1.53783792718067,0.82554747185289,0.740778109478847,0.753473828018764,0.27338845544205,0.915112692826091,1.86976272993241,3.35883485576779,0.967399816630967,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,1.01362607645082,0.513554785824136,0.389762468933385,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.729320151204882,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,1.64834360321323,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0.249810577937946,0,1.07435527024149,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p5@Fam113b}} | ||
|EntrezGene=239647 | |||
|HGNC= | |||
|MCL_coexpression_id=657 | |||
|UniProt= | |||
|association_with_transcript=66bp_to_uc007xku.1_5end | |||
|description=CAGE_peak_5_at_Fam113b_5end | |||
|id=chr15:97191697..97191715,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.25e-09!32;CL:0002032!4.25e-09!32;CL:0000037!4.25e-09!32;CL:0000566!4.25e-09!32;CL:0000837!4.25e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.59e-09,19;CL:0000988,4.70e-08,32;CL:0002032,4.70e-08,32;CL:0000037,4.70e-08,32;CL:0000837,4.70e-08,32;CL:0002320,5.07e-08,46;CL:0000134,5.07e-08,46;CL:0002092,2.06e-07,3;CL:0002540,2.06e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.30e-08,3;DOID:4045,3.30e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002405!3.11e-12!70;UBERON:0002193!1.76e-10!48;UBERON:0002390!3.21e-10!45;UBERON:0003061!3.21e-10!45;UBERON:0001474!1.84e-09!22;UBERON:0004765!1.84e-09!22;UBERON:0001434!1.84e-09!22;UBERON:0002371!5.51e-08!16;UBERON:0002204!6.43e-08!32;UBERON:0000926!9.43e-07!193;UBERON:0004120!9.43e-07!193;UBERON:0006603!9.43e-07!193 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.32e-11,32;UBERON:0001474,1.42e-10,22;UBERON:0004765,1.42e-10,22;UBERON:0001434,1.42e-10,22;UBERON:0002371,3.00e-10,16;UBERON:0002384,5.07e-08,46 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,1.03298658753261,0.140788722151667,0.468129052643987,0.513653904676515,0.159544317990673,0.513602189793617,0.611942816932982,0.999329285446988,1.01237633694913,1.39912375625629,0.157731082679119,0.822686601634433,0.84877930359606,0,2.38298282882125,1.82839852397255,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02237956884289,7.813353445238,3.66466620781659,5.88231488031014,3.41522742479223,8.25367600152961,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,3.5995988691256,1.97773272513395,1.4209602298922,0.599200221036809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52091337055676,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.776813650941515,0.148442139064825,0.346970653532272,0,0,0,0.117588707135705,0.125666591329675,0,0.144599356919912,4.42305275974937,0.485300549842228,0.883366073841574,1.45462575940567,0,0,0,0,4.55297473122497,8.39863823390771,5.33694953706872,0,0,0,0,0,0,0,0.407357455401265,1.49288364732112,0.505445516867349,0,0,0,0,0.30140963567143,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,9.83098462238529,7.46308930632674,8.52490498186778,0,0,0,0.23674473558521,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0.330418782983798,0,0,0,0.128867461322093,0,0,0.380451252225118,0,0,0,0,0,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0.500535317148282,1.57247196090562,1.57403478669398,0.608580364165509,0,0.50925170356284,1.15078454980324,1.13494658742525,1.09824565275233,1.43768206527355,1.86070473834252,0,0.252578877947112,0.179397413521912,0.482443521363367,1.10851914099963,0.37898282354097,0.162964976442026,0,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0.478364305972461,0.327726629431476,0.345369963731791,0.289298117163023,0,2.71952841909355,1.96705709207614,1.10374698521893,0,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.178065603667255,0.162886959353576,0,0,0,0,0.377210159511796,0.295301892880773,0,0,0,1.06949213515416,0.316036757935816,0,0,0,0,0,0,0,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,1.53783792718067,0.82554747185289,0.740778109478847,0.753473828018764,0.27338845544205,0.915112692826091,1.86976272993241,3.35883485576779,0.967399816630967,0,0,0.203319467126849,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0,0.129614973291793,0,0,0,0,0,0,0,0,0.13020438484395,0.209718688851422,0,0,0,1.01362607645082,0.513554785824136,0.389762468933385,0,0.198681354781265,0.120195449519969,0.147689527174577,0.302899349844443,0.381034033274999,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0,0.0897138566094757,0,0,0.187682475451182,0.549454872801795,0,0.501572104035363,0,0,0,0,0,0,0,0.45032120322422,0,0,0,0,0,0.729320151204882,0.209613162627982,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0.128050304809739,0.17230640686684,0.476293691283074,0.231768651889711,0.38581844092741,1.64834360321323,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.188218760830661,0.338458431566706,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0,0,0,0.249810577937946,0,1.07435527024149,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p5@Fam113b | |||
}} |
Revision as of 11:44, 13 September 2013
Short description: | p5@Fam113b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Fam113b_5end |
Coexpression cluster: | MCL_coexpression_mm9:657 |
Association with transcript: | 66bp_to_uc007xku.1_5end |
EntrezGene: | Fam113b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.59e-09 | 19 |
hematopoietic cell | 4.70e-08 | 32 |
hematopoietic oligopotent progenitor cell | 4.70e-08 | 32 |
hematopoietic stem cell | 4.70e-08 | 32 |
hematopoietic multipotent progenitor cell | 4.70e-08 | 32 |
connective tissue cell | 5.07e-08 | 46 |
mesenchymal cell | 5.07e-08 | 46 |
bone marrow cell | 2.06e-07 | 3 |
mesenchymal stem cell of the bone marrow | 2.06e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.32e-11 | 32 |
bone element | 1.42e-10 | 22 |
skeletal element | 1.42e-10 | 22 |
skeletal system | 1.42e-10 | 22 |
bone marrow | 3.00e-10 | 16 |
connective tissue | 5.07e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.30e-08 | 3 |
muscle cancer | 3.30e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.