FFCP PHASE1:Mm9::chr7:87924254..87924264,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:87924254..87924264,-|id=chr7:87924254..87924264,-|ontology_enrichment_celltype=CL:0000988!5.44e-07!32;CL:0002032!5.44e-07!32;CL:0000037!5.44e-07!32;CL:0000566!5.44e-07!32;CL:0000837!5.44e-07!32|ontology_enrichment_celltype_v019_2=CL:0000355,3.38e-13,9|ontology_enrichment_disease=DOID:0060100!5.08e-10!3;DOID:4045!5.08e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,6.64e-38,3;DOID:4045,6.64e-38,3;DOID:0050686,2.11e-19,6|ontology_enrichment_uberon=UBERON:0002204!3.98e-07!32|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.38e-13,9;UBERON:0002036,3.38e-13,9;UBERON:0002385,3.38e-13,9;UBERON:0000486,3.38e-13,9;UBERON:0007503,3.38e-13,9;UBERON:0001015,3.38e-13,9;UBERON:0002329,3.38e-13,9;UBERON:0003082,3.38e-13,9;UBERON:0003059,3.38e-13,9;UBERON:0007282,3.38e-13,9;UBERON:0004290,3.38e-13,9;UBERON:0009618,3.38e-13,9;UBERON:0000383,5.96e-12,10;UBERON:0007524,6.27e-11,11;UBERON:0003077,6.27e-11,11;UBERON:0007285,6.27e-11,11|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.548457734422955,0.84877930359606,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.906676722619,6.28228492768558,18.2351761289614,5.46436387966757,4.36959317728038,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,1.1981512450592,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr7:87924254..87924264,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr7:87924254..87924264,- | |||
|id=chr7:87924254..87924264,- | |||
|ontology_enrichment_celltype=CL:0000988!5.44e-07!32;CL:0002032!5.44e-07!32;CL:0000037!5.44e-07!32;CL:0000566!5.44e-07!32;CL:0000837!5.44e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.38e-13,9 | |||
|ontology_enrichment_disease=DOID:0060100!5.08e-10!3;DOID:4045!5.08e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,6.64e-38,3;DOID:4045,6.64e-38,3;DOID:0050686,2.11e-19,6 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.98e-07!32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.38e-13,9;UBERON:0002036,3.38e-13,9;UBERON:0002385,3.38e-13,9;UBERON:0000486,3.38e-13,9;UBERON:0007503,3.38e-13,9;UBERON:0001015,3.38e-13,9;UBERON:0002329,3.38e-13,9;UBERON:0003082,3.38e-13,9;UBERON:0003059,3.38e-13,9;UBERON:0007282,3.38e-13,9;UBERON:0004290,3.38e-13,9;UBERON:0009618,3.38e-13,9;UBERON:0000383,5.96e-12,10;UBERON:0007524,6.27e-11,11;UBERON:0003077,6.27e-11,11;UBERON:0007285,6.27e-11,11 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0,0,0.157731082679119,0.548457734422955,0.84877930359606,0,0.198581902401771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60384793810598,3.906676722619,6.28228492768558,18.2351761289614,5.46436387966757,4.36959317728038,0,0,0,0,0,0,0,0,0,0.503347818173209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0.150722640552623,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,1.1981512450592,0,0.889491589511453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.363533729477506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0,0,0,0,0,0,0,0.509935289981566,0,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr7:87924254..87924264,- | |||
}} |
Revision as of 14:19, 14 September 2013
Short description: | p@chr7:87924254..87924264, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:87924254..87924264, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.38e-13 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.38e-13 | 9 |
striated muscle tissue | 3.38e-13 | 9 |
muscle tissue | 3.38e-13 | 9 |
multilaminar epithelium | 3.38e-13 | 9 |
epithelial vesicle | 3.38e-13 | 9 |
musculature | 3.38e-13 | 9 |
somite | 3.38e-13 | 9 |
myotome | 3.38e-13 | 9 |
presomitic mesoderm | 3.38e-13 | 9 |
presumptive segmental plate | 3.38e-13 | 9 |
dermomyotome | 3.38e-13 | 9 |
trunk paraxial mesoderm | 3.38e-13 | 9 |
musculature of body | 5.96e-12 | 10 |
dense mesenchyme tissue | 6.27e-11 | 11 |
paraxial mesoderm | 6.27e-11 | 11 |
presumptive paraxial mesoderm | 6.27e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 6.64e-38 | 3 |
muscle cancer | 6.64e-38 | 3 |
organ system cancer | 2.11e-19 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.