FFCP PHASE1:Mm9::chr12:57633887..57633899,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=139|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:57633887..57633899,-|id=chr12:57633887..57633899,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!2.75e-27!17;UBERON:0005181!2.75e-27!17;UBERON:0002224!2.75e-27!17;UBERON:0000915!2.75e-27!17;UBERON:0008947!2.75e-27!17;UBERON:0003258!2.75e-27!17;UBERON:0002048!5.43e-23!14;UBERON:0000117!5.43e-23!14;UBERON:0000171!5.43e-23!14;UBERON:0000170!5.43e-23!14;UBERON:0005597!5.43e-23!14;UBERON:0000118!5.43e-23!14;UBERON:0005153!3.83e-18!17;UBERON:0000310!1.86e-10!6;UBERON:0001443!1.86e-10!6;UBERON:0005157!7.62e-10!27;UBERON:0000007!2.89e-08!8;UBERON:0003296!2.89e-08!8;UBERON:0010133!2.89e-08!8;UBERON:0000065!3.07e-08!41;UBERON:0001894!4.27e-08!10;UBERON:0006222!4.27e-08!10;UBERON:0001004!6.27e-08!42;UBERON:0000025!2.67e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.87e-58,17;UBERON:0005181,2.87e-58,17;UBERON:0002224,2.87e-58,17;UBERON:0000915,2.87e-58,17;UBERON:0008947,2.87e-58,17;UBERON:0003258,2.87e-58,17;UBERON:0002048,1.08e-53,14;UBERON:0000117,1.08e-53,14;UBERON:0000171,1.08e-53,14;UBERON:0000170,1.08e-53,14;UBERON:0005597,1.08e-53,14;UBERON:0000118,1.08e-53,14;UBERON:0005153,7.10e-44,17;UBERON:0005157,5.35e-37,20;UBERON:0000065,8.02e-23,41;UBERON:0001004,3.19e-22,42;UBERON:0000310,5.68e-19,6;UBERON:0001443,5.68e-19,6;UBERON:0009569,2.94e-13,66;UBERON:0005177,1.15e-10,79;UBERON:0001041,1.68e-10,80;UBERON:0005911,3.24e-09,69;UBERON:0002100,4.71e-09,90;UBERON:0000025,8.27e-09,114;UBERON:0004111,4.79e-08,122|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.287536413054709,0,0,0,0,0.791317726381163,1.00636407962651,0,0,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38219787324151,0,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,2.95605104266567,0.947457058852424,1.46668478797823,3.73439188705414,5.16318546234705,3.1826188913945,4.04674189506223,6.63454402716516,3.4679731703362,3.10050565508285,3.02964060449226,4.09658286789345,2.76295970985433,4.05017364028232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,1.4229455216103,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0,0,0,0.952587382566147,0.347652977834566,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0|short_description=p@chr12:57633887..57633899,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=139 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:57633887..57633899,- | |||
|id=chr12:57633887..57633899,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!2.75e-27!17;UBERON:0005181!2.75e-27!17;UBERON:0002224!2.75e-27!17;UBERON:0000915!2.75e-27!17;UBERON:0008947!2.75e-27!17;UBERON:0003258!2.75e-27!17;UBERON:0002048!5.43e-23!14;UBERON:0000117!5.43e-23!14;UBERON:0000171!5.43e-23!14;UBERON:0000170!5.43e-23!14;UBERON:0005597!5.43e-23!14;UBERON:0000118!5.43e-23!14;UBERON:0005153!3.83e-18!17;UBERON:0000310!1.86e-10!6;UBERON:0001443!1.86e-10!6;UBERON:0005157!7.62e-10!27;UBERON:0000007!2.89e-08!8;UBERON:0003296!2.89e-08!8;UBERON:0010133!2.89e-08!8;UBERON:0000065!3.07e-08!41;UBERON:0001894!4.27e-08!10;UBERON:0006222!4.27e-08!10;UBERON:0001004!6.27e-08!42;UBERON:0000025!2.67e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.87e-58,17;UBERON:0005181,2.87e-58,17;UBERON:0002224,2.87e-58,17;UBERON:0000915,2.87e-58,17;UBERON:0008947,2.87e-58,17;UBERON:0003258,2.87e-58,17;UBERON:0002048,1.08e-53,14;UBERON:0000117,1.08e-53,14;UBERON:0000171,1.08e-53,14;UBERON:0000170,1.08e-53,14;UBERON:0005597,1.08e-53,14;UBERON:0000118,1.08e-53,14;UBERON:0005153,7.10e-44,17;UBERON:0005157,5.35e-37,20;UBERON:0000065,8.02e-23,41;UBERON:0001004,3.19e-22,42;UBERON:0000310,5.68e-19,6;UBERON:0001443,5.68e-19,6;UBERON:0009569,2.94e-13,66;UBERON:0005177,1.15e-10,79;UBERON:0001041,1.68e-10,80;UBERON:0005911,3.24e-09,69;UBERON:0002100,4.71e-09,90;UBERON:0000025,8.27e-09,114;UBERON:0004111,4.79e-08,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244981598429908,0.287536413054709,0,0,0,0,0.791317726381163,1.00636407962651,0,0,0.56276261003168,0.45839474333043,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73192832808971,0.760079596425296,1.51657333504435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38219787324151,0,0,0.20778804455956,0,0,0,0,0,0.260240885925407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469052119962192,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,2.95605104266567,0.947457058852424,1.46668478797823,3.73439188705414,5.16318546234705,3.1826188913945,4.04674189506223,6.63454402716516,3.4679731703362,3.10050565508285,3.02964060449226,4.09658286789345,2.76295970985433,4.05017364028232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26042765821917,1.4229455216103,0.428674070063185,0.177340233642274,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0.188626341386076,0,0,0,0.952587382566147,0.347652977834566,0,0.412085900803307,0,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.188218760830661,0,0.365855945745545,0,0.271608227691724,0,0.118635018124174,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,1.07435527024149,0,0,0 | |||
|short_description=p@chr12:57633887..57633899,- | |||
}} |
Revision as of 22:58, 12 September 2013
Short description: | p@chr12:57633887..57633899, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:57633887..57633899, - |
Coexpression cluster: | MCL_coexpression_mm9:139 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 2.87e-58 | 17 |
thoracic segment organ | 2.87e-58 | 17 |
thoracic cavity | 2.87e-58 | 17 |
thoracic segment of trunk | 2.87e-58 | 17 |
respiratory primordium | 2.87e-58 | 17 |
endoderm of foregut | 2.87e-58 | 17 |
lung | 1.08e-53 | 14 |
respiratory tube | 1.08e-53 | 14 |
respiration organ | 1.08e-53 | 14 |
pair of lungs | 1.08e-53 | 14 |
lung primordium | 1.08e-53 | 14 |
lung bud | 1.08e-53 | 14 |
epithelial bud | 7.10e-44 | 17 |
epithelial fold | 5.35e-37 | 20 |
respiratory tract | 8.02e-23 | 41 |
respiratory system | 3.19e-22 | 42 |
breast | 5.68e-19 | 6 |
chest | 5.68e-19 | 6 |
subdivision of trunk | 2.94e-13 | 66 |
trunk region element | 1.15e-10 | 79 |
foregut | 1.68e-10 | 80 |
endo-epithelium | 3.24e-09 | 69 |
trunk | 4.71e-09 | 90 |
tube | 8.27e-09 | 114 |
anatomical conduit | 4.79e-08 | 122 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.