FFCP PHASE1:Mm9::chr2:25947296..25947311,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=67991|HGNC=|MCL_coexpression_id=283|UniProt=|association_with_transcript=27bp_to_ENSMUST00000152133_5end|description=CAGE_peak_10_at_Nacc2_5end|id=chr2:25947296..25947311,-|ontology_enrichment_celltype=CL:0000221!3.91e-15!44;CL:0000133!3.91e-15!44;CL:0002319!2.23e-14!43;CL:0000055!1.19e-13!50;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0002453!5.85e-10!8;CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39;CL:0002321!2.09e-08!70;CL:0000220!2.09e-08!70;CL:0000333!1.21e-07!10;CL:0000095!1.21e-07!10;CL:0000243!1.21e-07!10;CL:0000123!1.21e-07!10;CL:0000125!1.21e-07!10;CL:0000030!1.21e-07!10;CL:0000339!1.21e-07!10;CL:0000128!4.38e-07!6;CL:0000126!4.38e-07!6;CL:0000127!4.38e-07!6|ontology_enrichment_celltype_v019_2=CL:0002453,2.58e-26,8;CL:0000333,5.22e-21,10;CL:0000095,5.22e-21,10;CL:0000243,5.22e-21,10;CL:0000123,5.22e-21,10;CL:0000125,5.22e-21,10;CL:0000030,5.22e-21,10;CL:0000339,5.22e-21,10;CL:0000128,6.12e-16,6;CL:0000126,6.12e-16,6;CL:0000127,6.12e-16,6;CL:0000878,4.84e-13,2;CL:0000129,4.84e-13,2;CL:0002319,1.44e-12,43;CL:0002605,1.88e-12,2;CL:0002604,1.88e-12,2;CL:0000221,2.95e-12,44;CL:0000133,2.95e-12,44;CL:0002614,7.76e-09,3;CL:0002610,1.02e-08,3;CL:0002321,3.05e-07,70;CL:0002194,5.95e-07,4;CL:0000766,5.95e-07,4;CL:0000234,5.95e-07,4;CL:0000576,5.95e-07,4;CL:0000235,5.95e-07,4;CL:0000864,5.95e-07,4;CL:0002009,5.95e-07,4;CL:0000040,5.95e-07,4;CL:0000559,5.95e-07,4|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.82e-28!73;UBERON:0005743!1.82e-28!73;UBERON:0000073!2.29e-27!75;UBERON:0001016!2.29e-27!75;UBERON:0001049!6.42e-23!52;UBERON:0005068!6.42e-23!52;UBERON:0006241!6.42e-23!52;UBERON:0007135!6.42e-23!52;UBERON:0000955!4.12e-21!50;UBERON:0006238!4.12e-21!50;UBERON:0004121!6.30e-21!102;UBERON:0000924!6.30e-21!102;UBERON:0006601!6.30e-21!102;UBERON:0002616!5.83e-20!49;UBERON:0000033!1.62e-19!63;UBERON:0002346!1.20e-18!71;UBERON:0003075!1.20e-18!71;UBERON:0007284!1.20e-18!71;UBERON:0002020!3.71e-18!34;UBERON:0003076!4.43e-14!12;UBERON:0003057!4.43e-14!12;UBERON:0002791!5.56e-13!29;UBERON:0003528!5.56e-13!29;UBERON:0001893!5.56e-13!29;UBERON:0003080!9.15e-12!40;UBERON:0007811!1.27e-11!86;UBERON:0003056!2.26e-11!49;UBERON:0002780!9.00e-11!39;UBERON:0001890!9.00e-11!39;UBERON:0006240!9.00e-11!39;UBERON:0000153!7.99e-10!94;UBERON:0002240!9.27e-09!6;UBERON:0005174!9.27e-09!6;UBERON:0001137!9.27e-09!6;UBERON:0000956!1.07e-08!21;UBERON:0001869!1.07e-08!21;UBERON:0000203!1.07e-08!21;UBERON:0002619!2.76e-08!17;UBERON:0001954!2.58e-07!7;UBERON:0003022!2.58e-07!7;UBERON:0002421!2.58e-07!7;UBERON:0000349!2.58e-07!7;UBERON:0002600!2.58e-07!7;UBERON:0002298!2.94e-07!6;UBERON:0001948!3.07e-07!5;UBERON:0002315!3.07e-07!5;UBERON:0000025!3.25e-07!114;UBERON:0004733!6.67e-07!6;UBERON:0004732!6.67e-07!6;UBERON:0002028!6.67e-07!6;UBERON:0007277!6.67e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002950,8.54e-14,4;UBERON:0001891,8.54e-14,4;UBERON:0009616,8.54e-14,4;UBERON:0010286,8.54e-14,4;UBERON:0001896,3.67e-13,2;UBERON:0002298,3.67e-13,2;UBERON:0005290,3.67e-13,2;UBERON:0010096,3.67e-13,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0000073,7.10e-12,54;UBERON:0001049,3.07e-10,52;UBERON:0005068,3.07e-10,52;UBERON:0006241,3.07e-10,52;UBERON:0007135,3.07e-10,52;UBERON:0004733,7.51e-10,6;UBERON:0004732,7.51e-10,6;UBERON:0002028,7.51e-10,6;UBERON:0007277,7.51e-10,6;UBERON:0002616,2.19e-09,46;UBERON:0000955,3.65e-09,47;UBERON:0006238,3.65e-09,47;UBERON:0002038,7.76e-09,3;UBERON:0009663,7.76e-09,3;UBERON:0009661,7.76e-09,3;UBERON:0000125,7.76e-09,3;UBERON:0002308,7.76e-09,3;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0003076,1.66e-08,12;UBERON:0003057,1.66e-08,12;UBERON:0002346,4.38e-08,64;UBERON:0003075,4.38e-08,64;UBERON:0007284,4.38e-08,64;UBERON:0002259,4.83e-07,1;UBERON:0002314,4.83e-07,1;UBERON:0004061,4.83e-07,1;UBERON:0006777,4.83e-07,1;UBERON:0005882,4.83e-07,1;UBERON:0010371,6.27e-07,73|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,9.15705656797875,2.41654801007919,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,2.99600110518405,2.68952813725088,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0.191690942036473,0.919218786610021,2.20231761998777,1.91531007127782,0.921639199537461,0.131886287730194,0.0914876436024097,0,3.62937898701795,0,1.22238598221448,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,1.79748767285787,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,2.69586879162067,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0|short_description=p10@Nacc2}} | ||
|EntrezGene=67991 | |||
|HGNC= | |||
|MCL_coexpression_id=283 | |||
|UniProt= | |||
|association_with_transcript=27bp_to_ENSMUST00000152133_5end | |||
|description=CAGE_peak_10_at_Nacc2_5end | |||
|id=chr2:25947296..25947311,- | |||
|ontology_enrichment_celltype=CL:0000221!3.91e-15!44;CL:0000133!3.91e-15!44;CL:0002319!2.23e-14!43;CL:0000055!1.19e-13!50;CL:0000117!1.36e-12!23;CL:0000337!1.36e-12!23;CL:0002453!5.85e-10!8;CL:0000540!1.36e-08!33;CL:0000047!1.36e-08!33;CL:0000031!1.36e-08!33;CL:0000404!1.36e-08!33;CL:0000393!1.72e-08!39;CL:0000211!1.72e-08!39;CL:0002321!2.09e-08!70;CL:0000220!2.09e-08!70;CL:0000333!1.21e-07!10;CL:0000095!1.21e-07!10;CL:0000243!1.21e-07!10;CL:0000123!1.21e-07!10;CL:0000125!1.21e-07!10;CL:0000030!1.21e-07!10;CL:0000339!1.21e-07!10;CL:0000128!4.38e-07!6;CL:0000126!4.38e-07!6;CL:0000127!4.38e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,2.58e-26,8;CL:0000333,5.22e-21,10;CL:0000095,5.22e-21,10;CL:0000243,5.22e-21,10;CL:0000123,5.22e-21,10;CL:0000125,5.22e-21,10;CL:0000030,5.22e-21,10;CL:0000339,5.22e-21,10;CL:0000128,6.12e-16,6;CL:0000126,6.12e-16,6;CL:0000127,6.12e-16,6;CL:0000878,4.84e-13,2;CL:0000129,4.84e-13,2;CL:0002319,1.44e-12,43;CL:0002605,1.88e-12,2;CL:0002604,1.88e-12,2;CL:0000221,2.95e-12,44;CL:0000133,2.95e-12,44;CL:0002614,7.76e-09,3;CL:0002610,1.02e-08,3;CL:0002321,3.05e-07,70;CL:0002194,5.95e-07,4;CL:0000766,5.95e-07,4;CL:0000234,5.95e-07,4;CL:0000576,5.95e-07,4;CL:0000235,5.95e-07,4;CL:0000864,5.95e-07,4;CL:0002009,5.95e-07,4;CL:0000040,5.95e-07,4;CL:0000559,5.95e-07,4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.82e-28!73;UBERON:0005743!1.82e-28!73;UBERON:0000073!2.29e-27!75;UBERON:0001016!2.29e-27!75;UBERON:0001049!6.42e-23!52;UBERON:0005068!6.42e-23!52;UBERON:0006241!6.42e-23!52;UBERON:0007135!6.42e-23!52;UBERON:0000955!4.12e-21!50;UBERON:0006238!4.12e-21!50;UBERON:0004121!6.30e-21!102;UBERON:0000924!6.30e-21!102;UBERON:0006601!6.30e-21!102;UBERON:0002616!5.83e-20!49;UBERON:0000033!1.62e-19!63;UBERON:0002346!1.20e-18!71;UBERON:0003075!1.20e-18!71;UBERON:0007284!1.20e-18!71;UBERON:0002020!3.71e-18!34;UBERON:0003076!4.43e-14!12;UBERON:0003057!4.43e-14!12;UBERON:0002791!5.56e-13!29;UBERON:0003528!5.56e-13!29;UBERON:0001893!5.56e-13!29;UBERON:0003080!9.15e-12!40;UBERON:0007811!1.27e-11!86;UBERON:0003056!2.26e-11!49;UBERON:0002780!9.00e-11!39;UBERON:0001890!9.00e-11!39;UBERON:0006240!9.00e-11!39;UBERON:0000153!7.99e-10!94;UBERON:0002240!9.27e-09!6;UBERON:0005174!9.27e-09!6;UBERON:0001137!9.27e-09!6;UBERON:0000956!1.07e-08!21;UBERON:0001869!1.07e-08!21;UBERON:0000203!1.07e-08!21;UBERON:0002619!2.76e-08!17;UBERON:0001954!2.58e-07!7;UBERON:0003022!2.58e-07!7;UBERON:0002421!2.58e-07!7;UBERON:0000349!2.58e-07!7;UBERON:0002600!2.58e-07!7;UBERON:0002298!2.94e-07!6;UBERON:0001948!3.07e-07!5;UBERON:0002315!3.07e-07!5;UBERON:0000025!3.25e-07!114;UBERON:0004733!6.67e-07!6;UBERON:0004732!6.67e-07!6;UBERON:0002028!6.67e-07!6;UBERON:0007277!6.67e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.17e-16,73;UBERON:0001016,3.58e-16,75;UBERON:0002950,8.54e-14,4;UBERON:0001891,8.54e-14,4;UBERON:0009616,8.54e-14,4;UBERON:0010286,8.54e-14,4;UBERON:0001896,3.67e-13,2;UBERON:0002298,3.67e-13,2;UBERON:0005290,3.67e-13,2;UBERON:0010096,3.67e-13,2;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0000073,7.10e-12,54;UBERON:0001049,3.07e-10,52;UBERON:0005068,3.07e-10,52;UBERON:0006241,3.07e-10,52;UBERON:0007135,3.07e-10,52;UBERON:0004733,7.51e-10,6;UBERON:0004732,7.51e-10,6;UBERON:0002028,7.51e-10,6;UBERON:0007277,7.51e-10,6;UBERON:0002616,2.19e-09,46;UBERON:0000955,3.65e-09,47;UBERON:0006238,3.65e-09,47;UBERON:0002038,7.76e-09,3;UBERON:0009663,7.76e-09,3;UBERON:0009661,7.76e-09,3;UBERON:0000125,7.76e-09,3;UBERON:0002308,7.76e-09,3;UBERON:0004684,1.02e-08,3;UBERON:0002275,1.02e-08,3;UBERON:0003076,1.66e-08,12;UBERON:0003057,1.66e-08,12;UBERON:0002346,4.38e-08,64;UBERON:0003075,4.38e-08,64;UBERON:0007284,4.38e-08,64;UBERON:0002259,4.83e-07,1;UBERON:0002314,4.83e-07,1;UBERON:0004061,4.83e-07,1;UBERON:0006777,4.83e-07,1;UBERON:0005882,4.83e-07,1;UBERON:0010371,6.27e-07,73 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,9.15705656797875,2.41654801007919,1.1665793944457,0.979904951377538,1.43752564364972,0,0,0,0,0.286533439938757,0,0,0.528990979272033,0,0.338844532069132,0,0,0,0,2.99600110518405,2.68952813725088,0,0,0.210324961351382,0.571301968807607,0.441737081903227,0,0.191690942036473,0.919218786610021,2.20231761998777,1.91531007127782,0.921639199537461,0.131886287730194,0.0914876436024097,0,3.62937898701795,0,1.22238598221448,0.883885756421003,0.284743361598206,0.372798891650601,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,0.41889341362691,0,0,0,0,1.79748767285787,0.915001205637253,0.125654352112864,0.173824320192276,0.511430914660661,1.0389402227978,0.324482526135515,0,0,0,0,0,0,0,0,0.0680364991513279,0.2562274405697,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.841159794256509,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,2.69586879162067,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63563255026274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0,0.171853182343688,0,0.755393897389701,0,0,0.906284817968409,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0.191288332068843,0,0 | |||
|short_description=p10@Nacc2 | |||
}} |
Revision as of 23:29, 13 September 2013
Short description: | p10@Nacc2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Nacc2_5end |
Coexpression cluster: | MCL_coexpression_mm9:283 |
Association with transcript: | 27bp_to_ENSMUST00000152133_5end |
EntrezGene: | Nacc2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 2.58e-26 | 8 |
migratory neural crest cell | 5.22e-21 | 10 |
neuron associated cell | 5.22e-21 | 10 |
glial cell (sensu Vertebrata) | 5.22e-21 | 10 |
neuron associated cell (sensu Vertebrata) | 5.22e-21 | 10 |
glial cell | 5.22e-21 | 10 |
glioblast | 5.22e-21 | 10 |
glioblast (sensu Vertebrata) | 5.22e-21 | 10 |
oligodendrocyte | 6.12e-16 | 6 |
macroglial cell | 6.12e-16 | 6 |
astrocyte | 6.12e-16 | 6 |
central nervous system macrophage | 4.84e-13 | 2 |
microglial cell | 4.84e-13 | 2 |
neural cell | 1.44e-12 | 43 |
astrocyte of the cerebral cortex | 1.88e-12 | 2 |
astrocyte of the hippocampus | 1.88e-12 | 2 |
ectodermal cell | 2.95e-12 | 44 |
neurectodermal cell | 2.95e-12 | 44 |
neuron of the substantia nigra | 7.76e-09 | 3 |
raphe nuclei neuron | 1.02e-08 | 3 |
embryonic cell | 3.05e-07 | 70 |
monopoietic cell | 5.95e-07 | 4 |
myeloid leukocyte | 5.95e-07 | 4 |
phagocyte | 5.95e-07 | 4 |
monocyte | 5.95e-07 | 4 |
macrophage | 5.95e-07 | 4 |
tissue-resident macrophage | 5.95e-07 | 4 |
macrophage dendritic cell progenitor | 5.95e-07 | 4 |
monoblast | 5.95e-07 | 4 |
promonocyte | 5.95e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.