FFCP PHASE1:Mm9::chr2:119724075..119724111,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:119724075..119724111,-|id=chr2:119724075..119724111,-|ontology_enrichment_celltype=CL:0000988!1.07e-09!32;CL:0002032!1.07e-09!32;CL:0000037!1.07e-09!32;CL:0000566!1.07e-09!32;CL:0000837!1.07e-09!32;CL:0000838!1.12e-08!12;CL:0000219!3.97e-08!54;CL:0000084!7.62e-08!11;CL:0000827!7.62e-08!11;CL:0002031!7.92e-08!25;CL:0000542!8.38e-08!13;CL:0000051!8.38e-08!13;CL:0002320!1.31e-07!46;CL:0000134!1.31e-07!46;CL:0000893!2.14e-07!6;CL:0002489!2.14e-07!6;CL:0000898!2.14e-07!6;CL:0000809!2.14e-07!6;CL:0000810!2.14e-07!6;CL:0000895!2.14e-07!6;CL:0000808!2.14e-07!6;CL:0000894!2.14e-07!6;CL:0000806!2.14e-07!6;CL:0000807!2.14e-07!6;CL:0000805!2.14e-07!6;CL:0002425!2.14e-07!6;CL:0002436!2.14e-07!6;CL:0002427!2.14e-07!6;CL:0002428!2.14e-07!6;CL:0002429!2.14e-07!6;CL:0002433!2.14e-07!6;CL:0002431!2.14e-07!6;CL:0002432!2.14e-07!6;CL:0000624!2.64e-07!8|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-08,1;CL:0000632,1.84e-08,1;CL:0000624,5.59e-08,8;CL:0000815,5.62e-08,1;CL:0000792,5.62e-08,1;CL:0000355,1.38e-07,9;CL:0000791,3.77e-07,9;CL:0000789,3.77e-07,9;CL:0002420,3.77e-07,9;CL:0002419,3.77e-07,9;CL:0000790,3.77e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.41e-10,3;DOID:4045,2.41e-10,3|ontology_enrichment_uberon=UBERON:0002384!1.31e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10|phase1_expression=0,0,0,0.30246421130683,0,0,0,1.16210991097419,1.12630977721333,0.936258105287974,0.34243593645101,0.159544317990673,1.02720437958723,0.524522414513984,0,0,0,0.473193248037357,0.411343300817216,0.84877930359606,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,1.5626706890476,1.57057123192139,25.2939539853336,1.36609096991689,0.971020706062307,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,2.58127163094416,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,1.07021290561242,0.329098041204242,1.2178597964584,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr2:119724075..119724111,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:119724075..119724111,- | |||
|id=chr2:119724075..119724111,- | |||
|ontology_enrichment_celltype=CL:0000988!1.07e-09!32;CL:0002032!1.07e-09!32;CL:0000037!1.07e-09!32;CL:0000566!1.07e-09!32;CL:0000837!1.07e-09!32;CL:0000838!1.12e-08!12;CL:0000219!3.97e-08!54;CL:0000084!7.62e-08!11;CL:0000827!7.62e-08!11;CL:0002031!7.92e-08!25;CL:0000542!8.38e-08!13;CL:0000051!8.38e-08!13;CL:0002320!1.31e-07!46;CL:0000134!1.31e-07!46;CL:0000893!2.14e-07!6;CL:0002489!2.14e-07!6;CL:0000898!2.14e-07!6;CL:0000809!2.14e-07!6;CL:0000810!2.14e-07!6;CL:0000895!2.14e-07!6;CL:0000808!2.14e-07!6;CL:0000894!2.14e-07!6;CL:0000806!2.14e-07!6;CL:0000807!2.14e-07!6;CL:0000805!2.14e-07!6;CL:0002425!2.14e-07!6;CL:0002436!2.14e-07!6;CL:0002427!2.14e-07!6;CL:0002428!2.14e-07!6;CL:0002429!2.14e-07!6;CL:0002433!2.14e-07!6;CL:0002431!2.14e-07!6;CL:0002432!2.14e-07!6;CL:0000624!2.64e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.84e-08,1;CL:0000632,1.84e-08,1;CL:0000624,5.59e-08,8;CL:0000815,5.62e-08,1;CL:0000792,5.62e-08,1;CL:0000355,1.38e-07,9;CL:0000791,3.77e-07,9;CL:0000789,3.77e-07,9;CL:0002420,3.77e-07,9;CL:0002419,3.77e-07,9;CL:0000790,3.77e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.41e-10,3;DOID:4045,2.41e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.31e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.38e-07,9;UBERON:0002036,1.38e-07,9;UBERON:0002385,1.38e-07,9;UBERON:0000486,1.38e-07,9;UBERON:0007503,1.38e-07,9;UBERON:0001015,1.38e-07,9;UBERON:0002329,1.38e-07,9;UBERON:0003082,1.38e-07,9;UBERON:0003059,1.38e-07,9;UBERON:0007282,1.38e-07,9;UBERON:0004290,1.38e-07,9;UBERON:0009618,1.38e-07,9;UBERON:0000383,7.08e-07,10 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0,1.16210991097419,1.12630977721333,0.936258105287974,0.34243593645101,0.159544317990673,1.02720437958723,0.524522414513984,0,0,0,0.473193248037357,0.411343300817216,0.84877930359606,0.0850432901510698,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.332469290716985,0.408338712524738,0,1.5626706890476,1.57057123192139,25.2939539853336,1.36609096991689,0.971020706062307,0.125896817975577,0.304130793658544,0.183546752161682,0,0,0.219686182734472,0,0.139986421625363,0,0.335565212115473,0,0,0,0,1.54701627683233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0.075726193333184,0.0755715601067855,0.869593466105033,2.58127163094416,0,0,0,0,0,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0.479260498023681,1.19980546198682,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.772043721344145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0.199141273254367,0.189667900953082,0,0,0.203651327845314,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0.482443521363367,0,0,0,0.169745085775188,0,0,0.238043640886014,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404810701674894,0,0,0,0.141940085208269,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,1.05418608574999,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,1.07021290561242,0.329098041204242,1.2178597964584,0.469343416127421,0.21183207086382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339956859987711,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0.56369293868419,0.149516546043979,0,0.388902376688095,0,0.337912250981556,0.117357238645754,0,0,0,0.288030006257865,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0.564751842617067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr2:119724075..119724111,- | |||
}} |
Revision as of 21:48, 13 September 2013
Short description: | p@chr2:119724075..119724111, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:119724075..119724111, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.84e-08 | 1 |
hepatic stellate cell | 1.84e-08 | 1 |
CD4-positive, alpha-beta T cell | 5.59e-08 | 8 |
regulatory T cell | 5.62e-08 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.62e-08 | 1 |
multi-potent skeletal muscle stem cell | 1.38e-07 | 9 |
mature alpha-beta T cell | 3.77e-07 | 9 |
alpha-beta T cell | 3.77e-07 | 9 |
immature T cell | 3.77e-07 | 9 |
mature T cell | 3.77e-07 | 9 |
immature alpha-beta T cell | 3.77e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.38e-07 | 9 |
striated muscle tissue | 1.38e-07 | 9 |
muscle tissue | 1.38e-07 | 9 |
multilaminar epithelium | 1.38e-07 | 9 |
epithelial vesicle | 1.38e-07 | 9 |
musculature | 1.38e-07 | 9 |
somite | 1.38e-07 | 9 |
myotome | 1.38e-07 | 9 |
presomitic mesoderm | 1.38e-07 | 9 |
presumptive segmental plate | 1.38e-07 | 9 |
dermomyotome | 1.38e-07 | 9 |
trunk paraxial mesoderm | 1.38e-07 | 9 |
musculature of body | 7.08e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.41e-10 | 3 |
muscle cancer | 2.41e-10 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.