FFCP PHASE1:Mm9::chr18:69681575..69681579,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=21413|HGNC=|MCL_coexpression_id=148|UniProt=|association_with_transcript=128bp_to_ENSMUST00000126946_5end|description=CAGE_peak_41_at_Tcf4_5end|id=chr18:69681575..69681579,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,1.16e-18,1;CL:0000632,1.16e-18,1;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000128,8.26e-13,6;CL:0000126,8.26e-13,6;CL:0000127,8.26e-13,6;CL:0002605,3.37e-10,2;CL:0002604,3.37e-10,2;CL:0002603,4.13e-10,2;CL:0002453,7.26e-10,8;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10;CL:0000151,4.17e-07,3;CL:0000499,4.17e-07,3;CL:0000327,4.17e-07,3;CL:0000215,4.77e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,0.439372365468944,5.8328969722285,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,1.72084775396277,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.463537303779422,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0|short_description=p41@Tcf4}} | ||
|EntrezGene=21413 | |||
|HGNC= | |||
|MCL_coexpression_id=148 | |||
|UniProt= | |||
|association_with_transcript=128bp_to_ENSMUST00000126946_5end | |||
|description=CAGE_peak_41_at_Tcf4_5end | |||
|id=chr18:69681575..69681579,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.16e-18,1;CL:0000632,1.16e-18,1;CL:0000213,1.74e-18,1;CL:0002078,1.74e-18,1;CL:0000115,1.74e-18,1;CL:0002262,1.74e-18,1;CL:1000398,1.74e-18,1;CL:0000128,8.26e-13,6;CL:0000126,8.26e-13,6;CL:0000127,8.26e-13,6;CL:0002605,3.37e-10,2;CL:0002604,3.37e-10,2;CL:0002603,4.13e-10,2;CL:0002453,7.26e-10,8;CL:0000333,4.34e-08,10;CL:0000095,4.34e-08,10;CL:0000243,4.34e-08,10;CL:0000123,4.34e-08,10;CL:0000125,4.34e-08,10;CL:0000030,4.34e-08,10;CL:0000339,4.34e-08,10;CL:0000151,4.17e-07,3;CL:0000499,4.17e-07,3;CL:0000327,4.17e-07,3;CL:0000215,4.77e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,1.74e-18,1;UBERON:0001281,1.74e-18,1;UBERON:0000353,1.74e-18,1;UBERON:0003497,1.74e-18,1;UBERON:0003909,1.74e-18,1;UBERON:0003928,1.74e-18,1;UBERON:0003835,1.74e-18,1;UBERON:0003513,1.74e-18,1;UBERON:0001280,1.74e-18,1;UBERON:0004647,1.74e-18,1;UBERON:0002294,1.74e-18,1;UBERON:0001173,1.74e-18,1;UBERON:0004912,1.74e-18,1;UBERON:0005171,1.74e-18,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61630187656536,0.439372365468944,5.8328969722285,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,1.15945795480671,1.72084775396277,0,0,0.649776417447669,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0,0.116765342367169,0,0.164167464079095,0.243206428637567,0,0,0,0,0,0,0,0,0.232236671860439,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0,0,0,0,0.203651327845314,0.193952487167626,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0.505157755894224,0.179397413521912,0.482443521363367,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0,0.44292937929755,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.162886959353576,0,0,0.242780636154981,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0.49465875882444,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,0,0.206386867963223,0.185194527369712,0,0.136694227721025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.287177344778066,0,0.463537303779422,0,0,0,0,0.354951612318675,0.238436189947321,0.145346416632329,0,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0.441182838239031,0 | |||
|short_description=p41@Tcf4 | |||
}} |
Revision as of 16:40, 13 September 2013
Short description: | p41@Tcf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_41_at_Tcf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:148 |
Association with transcript: | 128bp_to_ENSMUST00000126946_5end |
EntrezGene: | Tcf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.16e-18 | 1 |
hepatic stellate cell | 1.16e-18 | 1 |
lining cell | 1.74e-18 | 1 |
meso-epithelial cell | 1.74e-18 | 1 |
endothelial cell | 1.74e-18 | 1 |
endothelial cell of sinusoid | 1.74e-18 | 1 |
endothelial cell of hepatic sinusoid | 1.74e-18 | 1 |
oligodendrocyte | 8.26e-13 | 6 |
macroglial cell | 8.26e-13 | 6 |
astrocyte | 8.26e-13 | 6 |
astrocyte of the cerebral cortex | 3.37e-10 | 2 |
astrocyte of the hippocampus | 3.37e-10 | 2 |
astrocyte of the cerebellum | 4.13e-10 | 2 |
oligodendrocyte precursor cell | 7.26e-10 | 8 |
migratory neural crest cell | 4.34e-08 | 10 |
neuron associated cell | 4.34e-08 | 10 |
glial cell (sensu Vertebrata) | 4.34e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 4.34e-08 | 10 |
glial cell | 4.34e-08 | 10 |
glioblast | 4.34e-08 | 10 |
glioblast (sensu Vertebrata) | 4.34e-08 | 10 |
secretory cell | 4.17e-07 | 3 |
stromal cell | 4.17e-07 | 3 |
extracellular matrix secreting cell | 4.17e-07 | 3 |
barrier cell | 4.77e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bile duct | 1.74e-18 | 1 |
hepatic sinusoid | 1.74e-18 | 1 |
parenchyma | 1.74e-18 | 1 |
abdomen blood vessel | 1.74e-18 | 1 |
sinusoid | 1.74e-18 | 1 |
digestive system duct | 1.74e-18 | 1 |
abdominal segment blood vessel | 1.74e-18 | 1 |
trunk blood vessel | 1.74e-18 | 1 |
liver parenchyma | 1.74e-18 | 1 |
liver lobule | 1.74e-18 | 1 |
biliary system | 1.74e-18 | 1 |
biliary tree | 1.74e-18 | 1 |
biliary bud | 1.74e-18 | 1 |
hepatic duct | 1.74e-18 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.