FFCP PHASE1:Mm9::chr17:24867833..24867848,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=115|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:24867833..24867848,+|id=chr17:24867833..24867848,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,1.37e-16,19;CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000557,1.04e-11,7;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!7.68e-07!45;UBERON:0003061!7.68e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58865521921416,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,2.75574786363617,1.79970819298022,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.5298058699447,1.53946597556024,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:24867833..24867848,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=115 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:24867833..24867848,+ | |||
|id=chr17:24867833..24867848,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.37e-16,19;CL:0000988,3.18e-13,32;CL:0002032,3.18e-13,32;CL:0000037,3.18e-13,32;CL:0000837,3.18e-13,32;CL:0000557,1.04e-11,7;CL:0002320,4.11e-09,46;CL:0000134,4.11e-09,46;CL:0000034,1.44e-08,97;CL:0000219,1.04e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.68e-07!45;UBERON:0003061!7.68e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.11e-09,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58865521921416,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441683036920787,0.484875253135222,0,0,0,0,2.75574786363617,1.79970819298022,1.65191295194984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40442637462647,1.28673953557358,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0.188368457004691,0,0,1.5298058699447,1.53946597556024,2.3493995546752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0.129920822977795,0,0.198681354781265,0.240390899039938,0,0.100966449948148,0.304827226619999,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:24867833..24867848,+ | |||
}} |
Revision as of 13:43, 13 September 2013
Short description: | p@chr17:24867833..24867848, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:24867833..24867848, + |
Coexpression cluster: | MCL_coexpression_mm9:115 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.37e-16 | 19 |
hematopoietic cell | 3.18e-13 | 32 |
hematopoietic oligopotent progenitor cell | 3.18e-13 | 32 |
hematopoietic stem cell | 3.18e-13 | 32 |
hematopoietic multipotent progenitor cell | 3.18e-13 | 32 |
granulocyte monocyte progenitor cell | 1.04e-11 | 7 |
connective tissue cell | 4.11e-09 | 46 |
mesenchymal cell | 4.11e-09 | 46 |
stem cell | 1.44e-08 | 97 |
motile cell | 1.04e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.11e-09 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.