FFCP PHASE1:Mm9::chr3:95454428..95454448,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1649|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:95454428..95454448,-|id=chr3:95454428..95454448,-|ontology_enrichment_celltype=CL:0000219!4.87e-15!54;CL:0002320!2.66e-12!46;CL:0000134!2.66e-12!46;CL:0000034!1.06e-10!97;CL:0000144!4.39e-10!121;CL:0000012!4.39e-10!121;CL:0002371!5.27e-08!118;CL:0000723!1.26e-07!91;CL:0000048!1.26e-07!91;CL:0000988!1.55e-07!32;CL:0002032!1.55e-07!32;CL:0000037!1.55e-07!32;CL:0000566!1.55e-07!32;CL:0000837!1.55e-07!32;CL:0000063!1.73e-07!66;CL:0000548!5.32e-07!115;CL:0000004!5.32e-07!115;CL:0000255!5.32e-07!115|ontology_enrichment_celltype_v019_2=CL:0002320,8.30e-15,46;CL:0000134,8.30e-15,46;CL:0000034,4.20e-14,97;CL:0000557,5.95e-13,7;CL:0000219,3.43e-12,54;CL:0000049,2.86e-11,19;CL:0002092,4.18e-11,3;CL:0002540,4.18e-11,3;CL:0000723,1.48e-10,91;CL:0000048,1.48e-10,91;CL:0000988,8.87e-10,32;CL:0002032,8.87e-10,32;CL:0000037,8.87e-10,32;CL:0000837,8.87e-10,32;CL:0002476,1.64e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.66e-12!46;UBERON:0002204!1.91e-11!32;UBERON:0002371!2.73e-08!16;UBERON:0000055!2.02e-07!5;UBERON:0001981!2.02e-07!5;UBERON:0002049!2.02e-07!5;UBERON:0007500!2.02e-07!5;UBERON:0007798!2.02e-07!5;UBERON:0004537!2.02e-07!5;UBERON:0006965!2.02e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.30e-15,46;UBERON:0002204,1.37e-13,32;UBERON:0002371,2.61e-13,16;UBERON:0001474,2.28e-09,22;UBERON:0004765,2.28e-09,22;UBERON:0001434,2.28e-09,22|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,3.66050677594334,3.7450324211519,0,0.0797721589953364,0,0,0,0,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,0,15.2940186888064,15.7100461540443,3.39857247121808,1.38486499773135,1.82478476195126,0.550640256485045,0,0.218025156380447,0.439372365468944,0.194429899074283,0.139986421625363,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,0,0,0,2.6996991518442,4.94433181283487,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377857800533928,2.02905142091174,0.860423876981386,2.719885334831,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0,0,0,6.70964697233154,5.99902730993408,2.66847476853436,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72434506044558,3.3455227924913,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,6.03165135757089,4.89515115436839,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.555583582109135,0,0,0.228778173206523,8.15896463970505,10.0765045673034,4.69879910935041,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr3:95454428..95454448,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1649 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:95454428..95454448,- | |||
|id=chr3:95454428..95454448,- | |||
|ontology_enrichment_celltype=CL:0000219!4.87e-15!54;CL:0002320!2.66e-12!46;CL:0000134!2.66e-12!46;CL:0000034!1.06e-10!97;CL:0000144!4.39e-10!121;CL:0000012!4.39e-10!121;CL:0002371!5.27e-08!118;CL:0000723!1.26e-07!91;CL:0000048!1.26e-07!91;CL:0000988!1.55e-07!32;CL:0002032!1.55e-07!32;CL:0000037!1.55e-07!32;CL:0000566!1.55e-07!32;CL:0000837!1.55e-07!32;CL:0000063!1.73e-07!66;CL:0000548!5.32e-07!115;CL:0000004!5.32e-07!115;CL:0000255!5.32e-07!115 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,8.30e-15,46;CL:0000134,8.30e-15,46;CL:0000034,4.20e-14,97;CL:0000557,5.95e-13,7;CL:0000219,3.43e-12,54;CL:0000049,2.86e-11,19;CL:0002092,4.18e-11,3;CL:0002540,4.18e-11,3;CL:0000723,1.48e-10,91;CL:0000048,1.48e-10,91;CL:0000988,8.87e-10,32;CL:0002032,8.87e-10,32;CL:0000037,8.87e-10,32;CL:0000837,8.87e-10,32;CL:0002476,1.64e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.66e-12!46;UBERON:0002204!1.91e-11!32;UBERON:0002371!2.73e-08!16;UBERON:0000055!2.02e-07!5;UBERON:0001981!2.02e-07!5;UBERON:0002049!2.02e-07!5;UBERON:0007500!2.02e-07!5;UBERON:0007798!2.02e-07!5;UBERON:0004537!2.02e-07!5;UBERON:0006965!2.02e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.30e-15,46;UBERON:0002204,1.37e-13,32;UBERON:0002371,2.61e-13,16;UBERON:0001474,2.28e-09,22;UBERON:0004765,2.28e-09,22;UBERON:0001434,2.28e-09,22 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0.258246646883153,3.66050677594334,3.7450324211519,0,0.0797721589953364,0,0,0,0,0,0.473193248037357,0.137114433605739,0,0.0850432901510698,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,2.3440060335714,0,15.2940186888064,15.7100461540443,3.39857247121808,1.38486499773135,1.82478476195126,0.550640256485045,0,0.218025156380447,0.439372365468944,0.194429899074283,0.139986421625363,0,0.503347818173209,0,0,0.257259436035947,0,0,0,0,0,0,0,2.6996991518442,4.94433181283487,1.4209602298922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377857800533928,2.02905142091174,0.860423876981386,2.719885334831,0,0.649776417447669,0,0,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0.776813650941515,0,0,0,0,0.452167921657868,0.352766121407114,0.251333182659351,0,0.144599356919912,0,0,0,0,0,0,0,0,6.70964697233154,5.99902730993408,2.66847476853436,0,0,0,0,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72434506044558,3.3455227924913,1.70498099637356,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.172684981865896,0,6.03165135757089,4.89515115436839,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0,0,0,0,0,0,0.555583582109135,0,0,0.228778173206523,8.15896463970505,10.0765045673034,4.69879910935041,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:95454428..95454448,- | |||
}} |
Revision as of 03:05, 14 September 2013
Short description: | p@chr3:95454428..95454448, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:95454428..95454448, - |
Coexpression cluster: | MCL_coexpression_mm9:1649 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 8.30e-15 | 46 |
mesenchymal cell | 8.30e-15 | 46 |
stem cell | 4.20e-14 | 97 |
granulocyte monocyte progenitor cell | 5.95e-13 | 7 |
motile cell | 3.43e-12 | 54 |
common myeloid progenitor | 2.86e-11 | 19 |
bone marrow cell | 4.18e-11 | 3 |
mesenchymal stem cell of the bone marrow | 4.18e-11 | 3 |
somatic stem cell | 1.48e-10 | 91 |
multi fate stem cell | 1.48e-10 | 91 |
hematopoietic cell | 8.87e-10 | 32 |
hematopoietic oligopotent progenitor cell | 8.87e-10 | 32 |
hematopoietic stem cell | 8.87e-10 | 32 |
hematopoietic multipotent progenitor cell | 8.87e-10 | 32 |
bone marrow macrophage | 1.64e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.30e-15 | 46 |
musculoskeletal system | 1.37e-13 | 32 |
bone marrow | 2.61e-13 | 16 |
bone element | 2.28e-09 | 22 |
skeletal element | 2.28e-09 | 22 |
skeletal system | 2.28e-09 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.