FFCP PHASE1:Mm9::chr2:163470976..163470990,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=68386|HGNC=|MCL_coexpression_id=6|UniProt=G5E8H2|association_with_transcript=390bp_to_ENSMUST00000076667,NR_028113,uc012civ.1_5end|description=CAGE_peak_1_at_0610039K10Rik_5end|id=chr2:163470976..163470990,+|ontology_enrichment_celltype=CL:0000988!1.55e-09!32;CL:0002032!1.55e-09!32;CL:0000037!1.55e-09!32;CL:0000566!1.55e-09!32;CL:0000837!1.55e-09!32;CL:0000049!3.58e-08!19;CL:0002031!6.48e-08!25;CL:0000763!8.94e-08!16|ontology_enrichment_celltype_v019_2=CL:0000763,1.32e-17,16;CL:0000049,2.76e-17,19;CL:0000553,1.96e-15,6;CL:0000556,1.96e-15,6;CL:0000988,5.57e-15,32;CL:0002032,5.57e-15,32;CL:0000037,5.57e-15,32;CL:0000837,5.57e-15,32;CL:0000839,6.64e-15,13;CL:0000050,1.44e-13,9;CL:0002031,1.22e-12,25;CL:0002320,6.18e-11,46;CL:0000134,6.18e-11,46;CL:0000219,8.71e-09,54;CL:0002027,5.29e-08,3;CL:0002006,5.29e-08,3;CL:0002024,5.29e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.33e-08,3;DOID:4045,1.33e-08,3;DOID:0050686,2.91e-07,6|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.33e-15,32;UBERON:0002371,1.90e-14,16;UBERON:0001474,2.16e-14,22;UBERON:0004765,2.16e-14,22;UBERON:0001434,2.16e-14,22;UBERON:0002384,6.18e-11,46|phase1_expression=0.160148847104794,0.348975407639361,0,1.81478526784098,2.00358291978539,0.671517087647559,1.63528848416868,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.34968160967599,1.66554880907831,1.41732687172878,1.39912375625629,3.62781490161973,3.42786084014347,2.97072756258621,0,0.297872853602656,1.04479915655574,0.639969691173627,0.22940928106717,0,1.29228598847722,0.430942465371778,0,0,0,1.90509202037889,0.61506478758457,0,0.866554859253824,0.166234645358492,0.816677425049476,5.85944283031671,3.906676722619,1.0470474879476,23.5292595212406,5.46436387966757,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0,1.32504911076236,1.45462575940567,0,0,0,0,1.55759661857696,0,0.635351135365324,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,2.1066395619397,0.51469581422943,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,1.2731292589071,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.327726629431476,0,0.433947175744535,7.53956419696361,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.709700426041343,0.534196811001766,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0,0,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0.925972636848558,0.565105371014073,0.956859594047176,0.915112692826091,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0,0.108005340821801,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0.56369293868419,0.747582730219894,0.496375471371293,0,0.645799117388655,0.675824501963113,0.352071715937262,0.5208175393758,0,0,0.288030006257865,0.316011120628178,0,0,0.25984164595559,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.463735671240843|short_description=p1@0610039K10Rik}} | ||
|EntrezGene=68386 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=G5E8H2 | |||
|association_with_transcript=390bp_to_ENSMUST00000076667,NR_028113,uc012civ.1_5end | |||
|description=CAGE_peak_1_at_0610039K10Rik_5end | |||
|id=chr2:163470976..163470990,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.55e-09!32;CL:0002032!1.55e-09!32;CL:0000037!1.55e-09!32;CL:0000566!1.55e-09!32;CL:0000837!1.55e-09!32;CL:0000049!3.58e-08!19;CL:0002031!6.48e-08!25;CL:0000763!8.94e-08!16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.32e-17,16;CL:0000049,2.76e-17,19;CL:0000553,1.96e-15,6;CL:0000556,1.96e-15,6;CL:0000988,5.57e-15,32;CL:0002032,5.57e-15,32;CL:0000037,5.57e-15,32;CL:0000837,5.57e-15,32;CL:0000839,6.64e-15,13;CL:0000050,1.44e-13,9;CL:0002031,1.22e-12,25;CL:0002320,6.18e-11,46;CL:0000134,6.18e-11,46;CL:0000219,8.71e-09,54;CL:0002027,5.29e-08,3;CL:0002006,5.29e-08,3;CL:0002024,5.29e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.33e-08,3;DOID:4045,1.33e-08,3;DOID:0050686,2.91e-07,6 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.33e-15,32;UBERON:0002371,1.90e-14,16;UBERON:0001474,2.16e-14,22;UBERON:0004765,2.16e-14,22;UBERON:0001434,2.16e-14,22;UBERON:0002384,6.18e-11,46 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,1.81478526784098,2.00358291978539,0.671517087647559,1.63528848416868,0.516493293766305,0.140788722151667,0.234064526321993,0,0,0.684802919724823,0.34968160967599,1.66554880907831,1.41732687172878,1.39912375625629,3.62781490161973,3.42786084014347,2.97072756258621,0,0.297872853602656,1.04479915655574,0.639969691173627,0.22940928106717,0,1.29228598847722,0.430942465371778,0,0,0,1.90509202037889,0.61506478758457,0,0.866554859253824,0.166234645358492,0.816677425049476,5.85944283031671,3.906676722619,1.0470474879476,23.5292595212406,5.46436387966757,1.45653105909346,0.125896817975577,0.101376931219515,0,0,0,0,0,0,0,3.6912173332702,2.90144856804538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0.131886287730194,0,0,0,0,0,0,0,0,0,0,2.31891590961342,0,0,0,0,0,0.421333260395256,0.170430322578058,0,0,0,0,0,0,0,0,0,0.11418387971906,2.07150306917737,0.148442139064825,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0.251333182659351,0,0.289198713839823,0,0,1.32504911076236,1.45462575940567,0,0,0,0,1.55759661857696,0,0.635351135365324,0,0,0,0.173824320192276,0,0.20778804455956,0,0,0.995255764880744,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0.199034266818493,2.1066395619397,0.51469581422943,1.13665399758237,0,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0.146199987425332,0,0,0.630869845692382,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,0,0.199141273254367,0,0,1.1270773567308,0.203651327845314,0,0.0701358198903186,0.0632365371242573,0,0,0,0.296452627087149,0,0,0.224862112384854,0.202860121388503,0,1.2731292589071,0.287696137450811,0.648540907100142,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0.167506257441816,0,0,0,0.44292937929755,0.159454768657487,0.327726629431476,0,0.433947175744535,7.53956419696361,1.08781136763742,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,0,0.709700426041343,0.534196811001766,0,0.164970122972535,0,0,0,0,0.590603785761546,0,0,0,0,1.58018378967908,1.05418608574999,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0,0.49465875882444,0,0,0,0,0.291480836629851,0,1.53783792718067,0.206386867963223,0.925972636848558,0.565105371014073,0.956859594047176,0.915112692826091,0.509935289981566,0.279902904647316,0.414599921413271,0,0,0,0.108005340821801,0,0.655087691238533,0.134864346384821,0.0826534557253359,0,0,1.24267862617385,0.56369293868419,0.747582730219894,0.496375471371293,0,0.645799117388655,0.675824501963113,0.352071715937262,0.5208175393758,0,0,0.288030006257865,0.316011120628178,0,0,0.25984164595559,0,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0,0.0974578807397524,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0,0,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0.154936841185966,0,0,0,0,0,0.220591419119515,0.463735671240843 | |||
|short_description=p1@0610039K10Rik | |||
}} |
Revision as of 22:46, 13 September 2013
Short description: | p1@0610039K10Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_0610039K10Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 390bp_to_ENSMUST00000076667, NR_028113, uc012civ.1_5end |
EntrezGene: | 0610039K10Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.32e-17 | 16 |
common myeloid progenitor | 2.76e-17 | 19 |
megakaryocyte progenitor cell | 1.96e-15 | 6 |
megakaryocyte | 1.96e-15 | 6 |
hematopoietic cell | 5.57e-15 | 32 |
hematopoietic oligopotent progenitor cell | 5.57e-15 | 32 |
hematopoietic stem cell | 5.57e-15 | 32 |
hematopoietic multipotent progenitor cell | 5.57e-15 | 32 |
myeloid lineage restricted progenitor cell | 6.64e-15 | 13 |
megakaryocyte-erythroid progenitor cell | 1.44e-13 | 9 |
hematopoietic lineage restricted progenitor cell | 1.22e-12 | 25 |
connective tissue cell | 6.18e-11 | 46 |
mesenchymal cell | 6.18e-11 | 46 |
motile cell | 8.71e-09 | 54 |
CD9-positive, CD41-positive megakaryocyte cell | 5.29e-08 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 5.29e-08 | 3 |
Kit-positive megakaryocyte progenitor cell | 5.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.33e-15 | 32 |
bone marrow | 1.90e-14 | 16 |
bone element | 2.16e-14 | 22 |
skeletal element | 2.16e-14 | 22 |
skeletal system | 2.16e-14 | 22 |
connective tissue | 6.18e-11 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.33e-08 | 3 |
muscle cancer | 1.33e-08 | 3 |
organ system cancer | 2.91e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.