FFCP PHASE1:Mm9::chr10:114688696..114688725,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2515|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:114688696..114688725,+|id=chr10:114688696..114688725,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,8.89e-14,32;CL:0002032,8.89e-14,32;CL:0000037,8.89e-14,32;CL:0000837,8.89e-14,32;CL:0002563,1.31e-12,9;CL:0002251,1.31e-12,9;CL:0002320,5.61e-12,46;CL:0000134,5.61e-12,46;CL:0000239,4.10e-11,6;CL:0000677,4.10e-11,6;CL:0000584,4.10e-11,6;CL:0000219,1.30e-10,54;CL:0000049,2.29e-10,19;CL:0000066,5.16e-10,25;CL:0000075,2.09e-09,7;CL:0000223,2.44e-09,20;CL:0002076,9.32e-09,15;CL:0000034,1.41e-08,97;CL:0002031,4.80e-07,25;CL:0000723,5.54e-07,91;CL:0000048,5.54e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.31e-12,9;UBERON:0004808,1.31e-12,9;UBERON:0001277,1.31e-12,9;UBERON:0002384,5.61e-12,46;UBERON:0000485,4.93e-10,11;UBERON:0001242,2.96e-08,13;UBERON:0001262,2.96e-08,13;UBERON:0004786,2.96e-08,13;UBERON:0000344,5.90e-07,15|phase1_expression=0,2.09385244583617,1.81999695755814,2.41971369045464,3.00537437967808,1.17515490338323,1.16806320297763,1.93684985162364,0.985521055061667,0.936258105287974,0.171217968225505,0.0797721589953364,2.22560948910567,1.83582845079895,0.333109761815663,1.21485160433896,0,1.73504190947031,0.685572168028694,1.27316895539409,0.595303031057488,0.0992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,0.57423196411502,1.7230479846363,1.72376986148711,0,0.252030129759931,0.443461021310609,1.27006134691926,5.53558308826113,0,3.46621943701529,0.166234645358492,1.22501613757421,2.09265815368454,0.7813353445238,1.0470474879476,7.05877785637217,2.04913645487534,1.45653105909346,0.125896817975577,0.811015449756117,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,4.69791296961662,2.90144856804538,1.00828139742739,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.227178579999552,0.151143120213571,5.79728977403356,0,0,1.07940638327563,0,0,0.140444420131752,1.02258193546835,0.519572009205738,0,0.422530259330042,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,0.34255163915718,1.03575153458869,0.29688427812965,0.693941307064543,0.608930956624282,0.461230994512117,0,0.117588707135705,0.251333182659351,0,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,2.03685711660064,5.39912457894067,1.65191295194984,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.720248519221397,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.199034266818493,2.1066395619397,2.57347907114715,2.55747149456033,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.697601834251224,0,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0.268412837520744,0,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.678980343100753,0.938760993154008,1.00503754465089,1.19021820443007,0.585400943573396,0.472905432318573,0,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0,0,0.534196811001766,0,0,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0.177340233642274,0.178368817602071,0,0,0.469343416127421,1.27099242518292,0.220528398054962,0.49465875882444,0,0.784068024066026,0.358117032009409,0.164140899745061,0.582961673259701,0,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0,0,1.01987057996313,3.21888340344413,2.07299960706636,0,0.316335993581135,0.609958401380546,0.108005340821801,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.516639293910924,0.844780627453891,0.469428954583016,0.2604087696879,0.104859344425711,1.20792060413003,1.15212002503146,1.26404448251271,0.202725215290164,0.205421914329655,0.25984164595559,0.716106782669926,0.7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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2515 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:114688696..114688725,+ | |||
|id=chr10:114688696..114688725,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.89e-14,32;CL:0002032,8.89e-14,32;CL:0000037,8.89e-14,32;CL:0000837,8.89e-14,32;CL:0002563,1.31e-12,9;CL:0002251,1.31e-12,9;CL:0002320,5.61e-12,46;CL:0000134,5.61e-12,46;CL:0000239,4.10e-11,6;CL:0000677,4.10e-11,6;CL:0000584,4.10e-11,6;CL:0000219,1.30e-10,54;CL:0000049,2.29e-10,19;CL:0000066,5.16e-10,25;CL:0000075,2.09e-09,7;CL:0000223,2.44e-09,20;CL:0002076,9.32e-09,15;CL:0000034,1.41e-08,97;CL:0002031,4.80e-07,25;CL:0000723,5.54e-07,91;CL:0000048,5.54e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.31e-12,9;UBERON:0004808,1.31e-12,9;UBERON:0001277,1.31e-12,9;UBERON:0002384,5.61e-12,46;UBERON:0000485,4.93e-10,11;UBERON:0001242,2.96e-08,13;UBERON:0001262,2.96e-08,13;UBERON:0004786,2.96e-08,13;UBERON:0000344,5.90e-07,15 | |||
|phase1_expression=0,2.09385244583617,1.81999695755814,2.41971369045464,3.00537437967808,1.17515490338323,1.16806320297763,1.93684985162364,0.985521055061667,0.936258105287974,0.171217968225505,0.0797721589953364,2.22560948910567,1.83582845079895,0.333109761815663,1.21485160433896,0,1.73504190947031,0.685572168028694,1.27316895539409,0.595303031057488,0.0992909512008853,0.261199789138935,0.799962113967033,0.45881856213434,0.57423196411502,1.7230479846363,1.72376986148711,0,0.252030129759931,0.443461021310609,1.27006134691926,5.53558308826113,0,3.46621943701529,0.166234645358492,1.22501613757421,2.09265815368454,0.7813353445238,1.0470474879476,7.05877785637217,2.04913645487534,1.45653105909346,0.125896817975577,0.811015449756117,0.550640256485045,0,0,0.219686182734472,0.194429899074283,0,1.43752564364972,4.69791296961662,2.90144856804538,1.00828139742739,0,0,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0.210324961351382,0,0,0,0.191690942036473,0,0,0,0,0.263772575460388,0.0914876436024097,0,0,0,0.15279824777681,0.294628585473668,0.142371680799103,0,0.227178579999552,0.151143120213571,5.79728977403356,0,0,1.07940638327563,0,0,0.140444420131752,1.02258193546835,0.519572009205738,0,0.422530259330042,1.28326477414318,0,0,0.865964164044856,0.253359865475099,0,0.34255163915718,1.03575153458869,0.29688427812965,0.693941307064543,0.608930956624282,0.461230994512117,0,0.117588707135705,0.251333182659351,0,0.578397427679647,0,0,0.220841518460394,0,1.86391761218122,0,0,0.255457055208591,2.03685711660064,5.39912457894067,1.65191295194984,0,0,0.125654352112864,0.173824320192276,0,0,0,0.203678727700633,0.497627882440372,0.252722758433675,0.210441855886474,0.520481771850815,0.229902104433473,0.720248519221397,0.452114453507145,0.204109497453984,0.2562274405697,0.187403449119458,0.258703370739016,0,0.567318240503458,0.527853372491847,0.219195732427575,0.556094498451196,0,0.205782136407943,0.199034266818493,2.1066395619397,2.57347907114715,2.55747149456033,0.207125772535502,0.234526059981096,0.180062061461015,0,0.393528463494808,0.308534225774757,0.697601834251224,0,0,0,0.164167464079095,0.243206428637567,0,0.439100230582101,0.268412837520744,0,0.308713837137853,0,0.264450566663544,0,0.232236671860439,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.189667900953082,0.228497025219458,0,0.203651327845314,0.193952487167626,0,0.189709611372772,0,0.31399745568275,0.123397163921801,0,0.333690211432188,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0.482443521363367,0.184753190166605,0.189491411770485,0.651859905768103,0.678980343100753,0.938760993154008,1.00503754465089,1.19021820443007,0.585400943573396,0.472905432318573,0,0.159454768657487,0.491589944147214,0.863424909329478,0.289298117163023,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0,0.631016438832513,0.390438744296638,0.215423397732799,0.716906393857656,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0,0,0.534196811001766,0,0,0,0,0,0,0.590603785761546,0.614870295887855,0,0,0,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0.643011105094777,0.177340233642274,0.178368817602071,0,0,0.469343416127421,1.27099242518292,0.220528398054962,0.49465875882444,0,0.784068024066026,0.358117032009409,0.164140899745061,0.582961673259701,0,0.512612642393558,0.206386867963223,0.740778109478847,0.376736914009382,0,0,1.01987057996313,3.21888340344413,2.07299960706636,0,0.316335993581135,0.609958401380546,0.108005340821801,0.627264888043406,0.218362563746178,0.269728692769641,0.0826534557253359,0,0.129614973291793,0,0,0.448549638131936,0.330916980914195,0.194451188344048,0.516639293910924,0.844780627453891,0.469428954583016,0.2604087696879,0.104859344425711,1.20792060413003,1.15212002503146,1.26404448251271,0.202725215290164,0.205421914329655,0.25984164595559,0.716106782669926,0.79472541912506,0.721172697119813,1.03382669022204,0.302899349844443,0.609654453239999,0.907435666231565,0.779663045918019,0.673482891482306,0.935015217452552,0.453460767230423,0,0.448569283047378,0.335769232728157,0.19318959403219,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.341467211508268,0.486213434136588,0,0.735374033800057,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.188626341386076,0.0936415074698824,0.128050304809739,0.287177344778066,0.476293691283074,0.115884325944855,0.192909220463705,0.412085900803307,0.294397840268795,0,0,0.476872379894642,0.145346416632329,0.0941093804153306,0,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0,0,0.154936841185966,0.578719832943424,0.499621155875892,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p@chr10:114688696..114688725,+ | |||
}} |
Revision as of 15:45, 12 September 2013
Short description: | p@chr10:114688696..114688725, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:114688696..114688725, + |
Coexpression cluster: | MCL_coexpression_mm9:2515 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.89e-14 | 32 |
hematopoietic oligopotent progenitor cell | 8.89e-14 | 32 |
hematopoietic stem cell | 8.89e-14 | 32 |
hematopoietic multipotent progenitor cell | 8.89e-14 | 32 |
intestinal epithelial cell | 1.31e-12 | 9 |
epithelial cell of alimentary canal | 1.31e-12 | 9 |
connective tissue cell | 5.61e-12 | 46 |
mesenchymal cell | 5.61e-12 | 46 |
brush border epithelial cell | 4.10e-11 | 6 |
gut absorptive cell | 4.10e-11 | 6 |
enterocyte | 4.10e-11 | 6 |
motile cell | 1.30e-10 | 54 |
common myeloid progenitor | 2.29e-10 | 19 |
epithelial cell | 5.16e-10 | 25 |
columnar/cuboidal epithelial cell | 2.09e-09 | 7 |
endodermal cell | 2.44e-09 | 20 |
endo-epithelial cell | 9.32e-09 | 15 |
stem cell | 1.41e-08 | 97 |
hematopoietic lineage restricted progenitor cell | 4.80e-07 | 25 |
somatic stem cell | 5.54e-07 | 91 |
multi fate stem cell | 5.54e-07 | 91 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.31e-12 | 9 |
gastrointestinal system epithelium | 1.31e-12 | 9 |
intestinal epithelium | 1.31e-12 | 9 |
connective tissue | 5.61e-12 | 46 |
simple columnar epithelium | 4.93e-10 | 11 |
intestinal mucosa | 2.96e-08 | 13 |
wall of intestine | 2.96e-08 | 13 |
gastrointestinal system mucosa | 2.96e-08 | 13 |
mucosa | 5.90e-07 | 15 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.