FFCP PHASE1:Mm9::chr4:77410279..77410283,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=135|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:77410279..77410283,-|id=chr4:77410279..77410283,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!6.66e-26!10;UBERON:0000411!6.66e-26!10;UBERON:0001950!6.66e-26!10;UBERON:0002619!9.12e-15!17;UBERON:0000956!9.94e-12!21;UBERON:0001869!9.94e-12!21;UBERON:0000203!9.94e-12!21;UBERON:0003056!1.30e-11!49;UBERON:0003080!1.51e-10!40;UBERON:0002791!3.04e-10!29;UBERON:0003528!3.04e-10!29;UBERON:0001893!3.04e-10!29;UBERON:0000033!6.07e-10!63;UBERON:0002616!7.83e-10!49;UBERON:0000955!1.36e-09!50;UBERON:0006238!1.36e-09!50;UBERON:0001049!3.85e-09!52;UBERON:0005068!3.85e-09!52;UBERON:0006241!3.85e-09!52;UBERON:0007135!3.85e-09!52;UBERON:0002780!5.49e-09!39;UBERON:0001890!5.49e-09!39;UBERON:0006240!5.49e-09!39;UBERON:0002346!1.56e-08!71;UBERON:0003075!1.56e-08!71;UBERON:0007284!1.56e-08!71;UBERON:0002020!1.59e-08!34|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.24e-27,10;UBERON:0000411,6.24e-27,10;UBERON:0001950,6.24e-27,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,3.26521046453006,0,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr4:77410279..77410283,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=135 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr4:77410279..77410283,- | |||
|id=chr4:77410279..77410283,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!6.66e-26!10;UBERON:0000411!6.66e-26!10;UBERON:0001950!6.66e-26!10;UBERON:0002619!9.12e-15!17;UBERON:0000956!9.94e-12!21;UBERON:0001869!9.94e-12!21;UBERON:0000203!9.94e-12!21;UBERON:0003056!1.30e-11!49;UBERON:0003080!1.51e-10!40;UBERON:0002791!3.04e-10!29;UBERON:0003528!3.04e-10!29;UBERON:0001893!3.04e-10!29;UBERON:0000033!6.07e-10!63;UBERON:0002616!7.83e-10!49;UBERON:0000955!1.36e-09!50;UBERON:0006238!1.36e-09!50;UBERON:0001049!3.85e-09!52;UBERON:0005068!3.85e-09!52;UBERON:0006241!3.85e-09!52;UBERON:0007135!3.85e-09!52;UBERON:0002780!5.49e-09!39;UBERON:0001890!5.49e-09!39;UBERON:0006240!5.49e-09!39;UBERON:0002346!1.56e-08!71;UBERON:0003075!1.56e-08!71;UBERON:0007284!1.56e-08!71;UBERON:0002020!1.59e-08!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.24e-27,10;UBERON:0000411,6.24e-27,10;UBERON:0001950,6.24e-27,10;UBERON:0002619,2.41e-16,17;UBERON:0000956,1.90e-13,21;UBERON:0001869,1.90e-13,21;UBERON:0000203,1.90e-13,21;UBERON:0003528,4.90e-10,29;UBERON:0002791,4.90e-10,29;UBERON:0001893,4.90e-10,29;UBERON:0002020,1.04e-08,34;UBERON:0002780,1.01e-07,39;UBERON:0001890,1.01e-07,39;UBERON:0006240,1.01e-07,39;UBERON:0003080,1.49e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0,0,0,0.324482526135515,0,0,0,0,0,0,0,0.150704817835715,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.460325236507177,0.572895513439397,3.26521046453006,0,0.755393897389701,0,0.45032120322422,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0,0.192909220463705,0,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr4:77410279..77410283,- | |||
}} |
Revision as of 05:27, 14 September 2013
Short description: | p@chr4:77410279..77410283, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:77410279..77410283, - |
Coexpression cluster: | MCL_coexpression_mm9:135 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.24e-27 | 10 |
visual cortex | 6.24e-27 | 10 |
neocortex | 6.24e-27 | 10 |
regional part of cerebral cortex | 2.41e-16 | 17 |
cerebral cortex | 1.90e-13 | 21 |
cerebral hemisphere | 1.90e-13 | 21 |
pallium | 1.90e-13 | 21 |
brain grey matter | 4.90e-10 | 29 |
regional part of telencephalon | 4.90e-10 | 29 |
telencephalon | 4.90e-10 | 29 |
gray matter | 1.04e-08 | 34 |
regional part of forebrain | 1.01e-07 | 39 |
forebrain | 1.01e-07 | 39 |
future forebrain | 1.01e-07 | 39 |
anterior neural tube | 1.49e-07 | 40 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.