FFCP PHASE1:Mm9::chr18:37803775..37803790,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=24074|HGNC=|MCL_coexpression_id=6|UniProt=Q9R1C0|association_with_transcript=67bp_to_ENSMUST00000066272,NM_175770,uc008eqi.2_5end|description=CAGE_peak_3_at_Taf7_5end|id=chr18:37803775..37803790,-|ontology_enrichment_celltype=CL:0000542!2.56e-07!13;CL:0000051!2.56e-07!13;CL:0000838!4.36e-07!12;CL:0000791!7.31e-07!9;CL:0000789!7.31e-07!9;CL:0002420!7.31e-07!9;CL:0002419!7.31e-07!9;CL:0000790!7.31e-07!9|ontology_enrichment_celltype_v019_2=CL:0000791,1.35e-11,9;CL:0000789,1.35e-11,9;CL:0002420,1.35e-11,9;CL:0002419,1.35e-11,9;CL:0000790,1.35e-11,9;CL:0000624,2.07e-10,8;CL:0000542,2.37e-10,13;CL:0000051,2.37e-10,13;CL:0000838,6.95e-10,12;CL:0000084,5.19e-09,11;CL:0000827,5.19e-09,11;CL:0000893,2.55e-08,6;CL:0002489,2.55e-08,6;CL:0000898,2.55e-08,6;CL:0000809,2.55e-08,6;CL:0000810,2.55e-08,6;CL:0000895,2.55e-08,6;CL:0000808,2.55e-08,6;CL:0000894,2.55e-08,6;CL:0000806,2.55e-08,6;CL:0000807,2.55e-08,6;CL:0000805,2.55e-08,6;CL:0002425,2.55e-08,6;CL:0002436,2.55e-08,6;CL:0002427,2.55e-08,6;CL:0002428,2.55e-08,6;CL:0002429,2.55e-08,6;CL:0002433,2.55e-08,6;CL:0002431,2.55e-08,6;CL:0002432,2.55e-08,6;CL:0000988,1.47e-07,32;CL:0002032,1.47e-07,32;CL:0000037,1.47e-07,32;CL:0000837,1.47e-07,32;CL:0000738,3.52e-07,17;CL:0002087,3.52e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.39e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.05e-11,23;UBERON:0000974,3.05e-11,23;UBERON:0004807,3.05e-11,23;UBERON:0005058,3.05e-11,23;UBERON:0003351,3.05e-11,23;UBERON:0009113,3.05e-11,23;UBERON:0003295,3.05e-11,23;UBERON:0009722,3.05e-11,23;UBERON:0005562,3.05e-11,23;UBERON:0007690,3.05e-11,23;UBERON:0006562,1.46e-10,24;UBERON:0003408,1.46e-10,24;UBERON:0001557,1.46e-10,24;UBERON:0001042,1.46e-10,24;UBERON:0008814,1.46e-10,24;UBERON:0009145,1.46e-10,24;UBERON:0000490,3.52e-10,66;UBERON:0000072,4.90e-10,27;UBERON:0000077,5.12e-10,35;UBERON:0004177,6.17e-09,29;UBERON:0005057,6.17e-09,29;UBERON:0007811,5.08e-08,36;UBERON:0003929,6.64e-08,55|phase1_expression=1.92178616525753,3.48975407639361,0.454999239389536,1.51232105653415,1.00179145989269,1.17515490338323,0.467225281191051,4.00282302668886,13.6565060487117,6.55380673701582,5.82141091966717,5.42450681168288,3.0816131387617,5.15780374272085,0.333109761815663,0.607425802169478,0.699561878128147,0.630924330716475,0.548457734422955,0.42438965179803,0.510259740906419,0.893618560807968,0.522399578277871,0.47997726838022,0.22940928106717,1.14846392823004,1.29228598847722,1.50829862880122,0.380046838912748,0.504060259519861,0.886922042621219,0,0,0,0.866554859253824,1.16364251750945,0.408338712524738,17.1597968602132,10.1573594788094,9.42342739152837,43.5291301142951,13.6609096991689,19.9059244742773,0.251793635951155,0.202753862439029,0.183546752161682,0,0,0,0,0.139986421625363,0,2.51673909086605,3.62681071005672,7.39406358113421,0.514518872071894,0,1.03134418455488,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0,0,0.285650984403804,0,0.489963196859816,0.670918297127655,0,0,0.510749352340751,0.307213066512487,0.131886287730194,0.274462930807229,0.52091337055676,0.279182999001381,0,0.61119299110724,0.589257170947335,0,0.372798891650601,0.681535739998656,0.226714680320357,15.6526823898906,1.72084775396277,1.3599426674155,1.07940638327563,0,0,0.421333260395256,0,0,0,1.54927761754349,0,0,0,0.216491041011214,0,1.51657333504435,0.91347103775248,0,0.148442139064825,0.693941307064543,0,1.15307748628029,0.150722640552623,0.823120949949934,0.502666365318702,3.70792451601561,0,0,0.647067399789637,0.441683036920787,0,0,0.585561594023094,0,0.255457055208591,3.83408398418945,5.39912457894067,3.81210681219194,0.149790639404823,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0,1.42575109390443,0.373220911830279,0.252722758433675,0,0.780722657776222,0.459804208866946,0.720248519221397,1.20563854268572,0.612328492361951,0.384341160854549,0.562210347358373,0.258703370739016,0.215567992932842,1.13463648100692,0.703804496655795,0.657587197282725,0.834141747676794,0.348252166522167,0.823128545631774,0.199034266818493,2.1066395619397,3.86021860672073,2.55747149456033,0.207125772535502,0.938104239924385,0.180062061461015,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0,0.350296027101508,0.16455984991348,0.32833492815819,0.324275238183423,0.292399974850665,0.439100230582101,0,0.210289948564127,0.205809224758569,0,0.528901133327089,1.06644125267617,0.464473343720877,0.644337306610467,0.403367049246685,1.11189021922435,0.380451252225118,0,1.31759163779209,0.754005626400808,0.596869416123452,0.19496408711912,0.898819408654221,0.216138049874694,0.597423819763102,0,1.25673363870702,0,0.407302655690628,0.193952487167626,0.771494018793504,0.505892296994058,0.295220295959204,0.627994911365499,0.123397163921801,0,0.166845105716094,0.589676985339609,0.449724224769707,0.608580364165509,0.241177159752417,0.50925170356284,0.575392274901621,0.324270453550071,0.823684239564244,1.437682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| ||
|EntrezGene=24074 | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=Q9R1C0 | |||
|association_with_transcript=67bp_to_ENSMUST00000066272,NM_175770,uc008eqi.2_5end | |||
|description=CAGE_peak_3_at_Taf7_5end | |||
|id=chr18:37803775..37803790,- | |||
|ontology_enrichment_celltype=CL:0000542!2.56e-07!13;CL:0000051!2.56e-07!13;CL:0000838!4.36e-07!12;CL:0000791!7.31e-07!9;CL:0000789!7.31e-07!9;CL:0002420!7.31e-07!9;CL:0002419!7.31e-07!9;CL:0000790!7.31e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.35e-11,9;CL:0000789,1.35e-11,9;CL:0002420,1.35e-11,9;CL:0002419,1.35e-11,9;CL:0000790,1.35e-11,9;CL:0000624,2.07e-10,8;CL:0000542,2.37e-10,13;CL:0000051,2.37e-10,13;CL:0000838,6.95e-10,12;CL:0000084,5.19e-09,11;CL:0000827,5.19e-09,11;CL:0000893,2.55e-08,6;CL:0002489,2.55e-08,6;CL:0000898,2.55e-08,6;CL:0000809,2.55e-08,6;CL:0000810,2.55e-08,6;CL:0000895,2.55e-08,6;CL:0000808,2.55e-08,6;CL:0000894,2.55e-08,6;CL:0000806,2.55e-08,6;CL:0000807,2.55e-08,6;CL:0000805,2.55e-08,6;CL:0002425,2.55e-08,6;CL:0002436,2.55e-08,6;CL:0002427,2.55e-08,6;CL:0002428,2.55e-08,6;CL:0002429,2.55e-08,6;CL:0002433,2.55e-08,6;CL:0002431,2.55e-08,6;CL:0002432,2.55e-08,6;CL:0000988,1.47e-07,32;CL:0002032,1.47e-07,32;CL:0000037,1.47e-07,32;CL:0000837,1.47e-07,32;CL:0000738,3.52e-07,17;CL:0002087,3.52e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.39e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.05e-11,23;UBERON:0000974,3.05e-11,23;UBERON:0004807,3.05e-11,23;UBERON:0005058,3.05e-11,23;UBERON:0003351,3.05e-11,23;UBERON:0009113,3.05e-11,23;UBERON:0003295,3.05e-11,23;UBERON:0009722,3.05e-11,23;UBERON:0005562,3.05e-11,23;UBERON:0007690,3.05e-11,23;UBERON:0006562,1.46e-10,24;UBERON:0003408,1.46e-10,24;UBERON:0001557,1.46e-10,24;UBERON:0001042,1.46e-10,24;UBERON:0008814,1.46e-10,24;UBERON:0009145,1.46e-10,24;UBERON:0000490,3.52e-10,66;UBERON:0000072,4.90e-10,27;UBERON:0000077,5.12e-10,35;UBERON:0004177,6.17e-09,29;UBERON:0005057,6.17e-09,29;UBERON:0007811,5.08e-08,36;UBERON:0003929,6.64e-08,55 | |||
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| |||
|short_description=p3@Taf7 | |||
}} |
Revision as of 16:06, 13 September 2013
Short description: | p3@Taf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Taf7_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 67bp_to_ENSMUST00000066272, NM_175770, uc008eqi.2_5end |
EntrezGene: | Taf7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.05e-11 | 23 |
neck | 3.05e-11 | 23 |
respiratory system epithelium | 3.05e-11 | 23 |
hemolymphoid system gland | 3.05e-11 | 23 |
pharyngeal epithelium | 3.05e-11 | 23 |
thymic region | 3.05e-11 | 23 |
pharyngeal gland | 3.05e-11 | 23 |
entire pharyngeal arch endoderm | 3.05e-11 | 23 |
thymus primordium | 3.05e-11 | 23 |
early pharyngeal endoderm | 3.05e-11 | 23 |
pharynx | 1.46e-10 | 24 |
gland of gut | 1.46e-10 | 24 |
upper respiratory tract | 1.46e-10 | 24 |
chordate pharynx | 1.46e-10 | 24 |
pharyngeal arch system | 1.46e-10 | 24 |
pharyngeal region of foregut | 1.46e-10 | 24 |
unilaminar epithelium | 3.52e-10 | 66 |
segment of respiratory tract | 4.90e-10 | 27 |
mixed endoderm/mesoderm-derived structure | 5.12e-10 | 35 |
hemopoietic organ | 6.17e-09 | 29 |
immune organ | 6.17e-09 | 29 |
craniocervical region | 5.08e-08 | 36 |
gut epithelium | 6.64e-08 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.