FFCP PHASE1:Mm9::chr2:34726609..34726633,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=231|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:34726609..34726633,+|id=chr2:34726609..34726633,+|ontology_enrichment_celltype=CL:0000063!1.32e-07!66;CL:0000838!1.90e-07!12;CL:0000542!3.29e-07!13;CL:0000051!3.29e-07!13;CL:0000791!4.15e-07!9;CL:0000789!4.15e-07!9;CL:0002420!4.15e-07!9;CL:0002419!4.15e-07!9;CL:0000790!4.15e-07!9;CL:0000084!7.88e-07!11;CL:0000827!7.88e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,2.25e-09,9;CL:0000789,2.25e-09,9;CL:0002420,2.25e-09,9;CL:0002419,2.25e-09,9;CL:0000790,2.25e-09,9;CL:0000838,3.68e-09,12;CL:0000624,9.24e-09,8;CL:0000084,2.64e-08,11;CL:0000827,2.64e-08,11;CL:0000542,3.96e-08,13;CL:0000051,3.96e-08,13;CL:0002320,1.37e-07,46;CL:0000134,1.37e-07,46;CL:0000034,2.16e-07,97;CL:0000988,2.88e-07,32;CL:0002032,2.88e-07,32;CL:0000037,2.88e-07,32;CL:0000837,2.88e-07,32;CL:0000893,5.56e-07,6;CL:0002489,5.56e-07,6;CL:0000898,5.56e-07,6;CL:0000809,5.56e-07,6;CL:0000810,5.56e-07,6;CL:0000895,5.56e-07,6;CL:0000808,5.56e-07,6;CL:0000894,5.56e-07,6;CL:0000806,5.56e-07,6;CL:0000807,5.56e-07,6;CL:0000805,5.56e-07,6;CL:0002425,5.56e-07,6;CL:0002436,5.56e-07,6;CL:0002427,5.56e-07,6;CL:0002428,5.56e-07,6;CL:0002429,5.56e-07,6;CL:0002433,5.56e-07,6;CL:0002431,5.56e-07,6;CL:0002432,5.56e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-07,46|phase1_expression=1.92178616525753,2.79180326111489,1.81999695755814,1.51232105653415,1.00179145989269,1.6787927191189,0.700837921786577,9.16775596435192,5.91312633037,7.72412936862578,6.16384685611818,2.79202556483677,7.36163138704185,5.94458736449182,0.333109761815663,0.404950534779652,0,1.89277299214943,0.822686601634433,0.84877930359606,1.02051948181284,1.29078236561151,0.783599367416806,0.159992422793407,0.22940928106717,1.72269589234506,0,0.215471232685889,0.380046838912748,0.504060259519861,1.10865255327652,1.90509202037889,3.07532393792285,0,3.17736781726402,1.66234645358492,3.87921776898501,4.18531630736908,0.7813353445238,4.18818995179039,6.47054636834116,2.73218193983378,4.36959317728038,1.51076181570693,1.52065396829272,2.0190142737785,0,0.436050312760893,1.09843091367236,1.1665793944457,0,0,4.19456515144341,3.62681071005672,2.01656279485478,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,0.518448061542388,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.383381884072945,1.83843757322004,0,0.127687338085188,0,0.395658863190582,0.457438218012048,0,0.279182999001381,1.12552522006336,0,0.294628585473668,0.142371680799103,0.931997229126503,1.06016670666458,0.604572480854284,12.7540375028738,0.860423876981386,2.719885334831,2.15881276655127,0.649776417447669,1.34408066129201,0.561777680527007,1.02258193546835,1.81850203222008,1.7666978725517,1.12674735821344,3.84979432242953,2.54805239706646,0,1.08245520505607,0.760079596425296,0,0.5709193985953,1.8125651855302,0.29688427812965,0.346970653532272,0,1.15307748628029,0.904335843315735,0.470354828542819,1.63366568728578,0.494389935468748,0.722996784599558,0,0.485300549842228,0.662524555381181,0.969750506270444,0,1.17112318804619,0.41889341362691,0,2.87556298814209,4.79922184794726,1.90605340609597,0,0.915001205637253,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.611036183101898,0.497627882440372,2.77995034277042,0.210441855886474,0.650602214813519,0.919608417733892,0.540186389416048,0.90422890701429,0.748401490664606,1.15302348256365,0.843315521037559,1.81092359517311,1.29340795759705,0.945530400839096,1.58356011747554,0.219195732427575,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0.702213187313235,4.37491442095016,1.42081749697796,0.207125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.983821158737019,0.462801338662135,0.465067889500816,1.3413670069981,0.583826711835847,0.658239399653922,0.492502392237286,0.56748166682099,0.730999937126662,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0.660837565967596,0,0.853153002140936,1.16118335930219,0.38660238396628,0.201683524623343,1.33426826306922,0.570676878337677,0.949058123089023,0.494096864172033,0.754005626400808,0.994782360205754,0.779856348476481,0,0.648414149624083,0.398282546508734,1.32767530667157,1.48523066392647,0,1.4255592949172,0.581857461502877,0.771494018793504,1.26473074248515,1.62371162777562,1.56998727841375,1.48076596706161,1.48226313543574,0.667380422864376,0.196558995113203,1.34917267430912,1.01430060694251,0.241177159752417,0.763877555344259,0.863088412352432,0,0.549122826376163,0,0.744281895337007,0.936113019343682,0.757736633841335,0.896987067609561,0,0.369506380333209,0.757965647081939,0.977789858652155,0.339490171550376,0.704070744865506,1.17254380209271,2.14239276797412,1.36593553500459,0.788175720530955,0.44292937929755,1.43509291791738,1.14704320301017,1.20879487306127,1.44649058581512,1.50791283939272,0,2.45882136509518,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,1.57754109708128,0.780877488593277,0.861693590931196,1.43381278771531,2.22798674082394,1.69845918473299,1.21443210502468,0.876767573733936,2.37172666767914,0.321321316421807,0.425820255624806,0.890328018336276,0.81443479676788,0.824850614862677,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,1.53717573971964,1.29214146584111,0.363533729477506,0,1.58018378967908,1.05418608574999,0,1.36175842301515,1.08036656418786,1.29358683782755,2.57204442037911,1.59606210278046,1.42695054081656,0.164549020602121,0.913394847343798,0.704015124191131,1.27099242518292,0.661585194164886,1.15420377059036,0.322928853391811,1.14594557363496,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0.683483523191411,0.82554747185289,1.11116716421827,0.376736914009382,0.820165366326151,0.915112692826091,3.90950388985867,4.61839792668071,3.31679937130617,0,1.10717597753397,0,0.540026704109006,1.04544148007234,0.655087691238533,0.539457385539283,0.165306911450672,0,1.29614973291793,1.24267862617385,2.25477175473676,1.04661582230785,1.65458490457098,0.972255941720238,0.774958940866387,1.18269287843545,0.58678619322877,0.781226309063701,1.04859344425711,2.65742532908607,2.30424005006292,0.316011120628178,0.810900861160657,0.718976700153791,0.909445760844565,1.07416017400489,0.39736270956253,1.20195449519969,1.47689527174577,1.11063094942962,0.762068066549998,0.604957110821043,0.877120926657772,1.82802499116626,1.8700304349051,0.226730383615211,0.221985953374065,0.717710852875806,0.335769232728157,0.386379188064381,0.375364950902364,0.915758121336325,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.31136204275253,0.798049746802062,0.512200817262403,1.21553358534147,0.628839487883947,0.919217542250071,0.222246727801615,0.824140228955577,0,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.512201219238954,0.574354689556133,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.354951612318675,1.66905332963125,0.290692833264657,0.752875043322645,0.761531471025089,0.365855945745545,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0.788035859004508,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.382576664137687,0.220591419119515,0.695603506861264|short_description=p@chr2:34726609..34726633,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=231 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:34726609..34726633,+ | |||
|id=chr2:34726609..34726633,+ | |||
|ontology_enrichment_celltype=CL:0000063!1.32e-07!66;CL:0000838!1.90e-07!12;CL:0000542!3.29e-07!13;CL:0000051!3.29e-07!13;CL:0000791!4.15e-07!9;CL:0000789!4.15e-07!9;CL:0002420!4.15e-07!9;CL:0002419!4.15e-07!9;CL:0000790!4.15e-07!9;CL:0000084!7.88e-07!11;CL:0000827!7.88e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.25e-09,9;CL:0000789,2.25e-09,9;CL:0002420,2.25e-09,9;CL:0002419,2.25e-09,9;CL:0000790,2.25e-09,9;CL:0000838,3.68e-09,12;CL:0000624,9.24e-09,8;CL:0000084,2.64e-08,11;CL:0000827,2.64e-08,11;CL:0000542,3.96e-08,13;CL:0000051,3.96e-08,13;CL:0002320,1.37e-07,46;CL:0000134,1.37e-07,46;CL:0000034,2.16e-07,97;CL:0000988,2.88e-07,32;CL:0002032,2.88e-07,32;CL:0000037,2.88e-07,32;CL:0000837,2.88e-07,32;CL:0000893,5.56e-07,6;CL:0002489,5.56e-07,6;CL:0000898,5.56e-07,6;CL:0000809,5.56e-07,6;CL:0000810,5.56e-07,6;CL:0000895,5.56e-07,6;CL:0000808,5.56e-07,6;CL:0000894,5.56e-07,6;CL:0000806,5.56e-07,6;CL:0000807,5.56e-07,6;CL:0000805,5.56e-07,6;CL:0002425,5.56e-07,6;CL:0002436,5.56e-07,6;CL:0002427,5.56e-07,6;CL:0002428,5.56e-07,6;CL:0002429,5.56e-07,6;CL:0002433,5.56e-07,6;CL:0002431,5.56e-07,6;CL:0002432,5.56e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.37e-07,46 | |||
|phase1_expression=1.92178616525753,2.79180326111489,1.81999695755814,1.51232105653415,1.00179145989269,1.6787927191189,0.700837921786577,9.16775596435192,5.91312633037,7.72412936862578,6.16384685611818,2.79202556483677,7.36163138704185,5.94458736449182,0.333109761815663,0.404950534779652,0,1.89277299214943,0.822686601634433,0.84877930359606,1.02051948181284,1.29078236561151,0.783599367416806,0.159992422793407,0.22940928106717,1.72269589234506,0,0.215471232685889,0.380046838912748,0.504060259519861,1.10865255327652,1.90509202037889,3.07532393792285,0,3.17736781726402,1.66234645358492,3.87921776898501,4.18531630736908,0.7813353445238,4.18818995179039,6.47054636834116,2.73218193983378,4.36959317728038,1.51076181570693,1.52065396829272,2.0190142737785,0,0.436050312760893,1.09843091367236,1.1665793944457,0,0,4.19456515144341,3.62681071005672,2.01656279485478,0.257259436035947,0.286533439938757,0,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,0.768436610643109,0.518448061542388,0.135005938331691,0.210324961351382,0,0.220868540951614,0.244981598429908,0.383381884072945,1.83843757322004,0,0.127687338085188,0,0.395658863190582,0.457438218012048,0,0.279182999001381,1.12552522006336,0,0.294628585473668,0.142371680799103,0.931997229126503,1.06016670666458,0.604572480854284,12.7540375028738,0.860423876981386,2.719885334831,2.15881276655127,0.649776417447669,1.34408066129201,0.561777680527007,1.02258193546835,1.81850203222008,1.7666978725517,1.12674735821344,3.84979432242953,2.54805239706646,0,1.08245520505607,0.760079596425296,0,0.5709193985953,1.8125651855302,0.29688427812965,0.346970653532272,0,1.15307748628029,0.904335843315735,0.470354828542819,1.63366568728578,0.494389935468748,0.722996784599558,0,0.485300549842228,0.662524555381181,0.969750506270444,0,1.17112318804619,0.41889341362691,0,2.87556298814209,4.79922184794726,1.90605340609597,0,0.915001205637253,0.251308704225729,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,0.611036183101898,0.497627882440372,2.77995034277042,0.210441855886474,0.650602214813519,0.919608417733892,0.540186389416048,0.90422890701429,0.748401490664606,1.15302348256365,0.843315521037559,1.81092359517311,1.29340795759705,0.945530400839096,1.58356011747554,0.219195732427575,0.556094498451196,0.696504333044333,0.823128545631774,0.796137067273973,0.702213187313235,4.37491442095016,1.42081749697796,0.207125772535502,0.469052119962192,0.540186184383045,0.946978942340841,0.983821158737019,0.462801338662135,0.465067889500816,1.3413670069981,0.583826711835847,0.658239399653922,0.492502392237286,0.56748166682099,0.730999937126662,0.439100230582101,0.268412837520744,0.420579897128254,0.308713837137853,0.660837565967596,0,0.853153002140936,1.16118335930219,0.38660238396628,0.201683524623343,1.33426826306922,0.570676878337677,0.949058123089023,0.494096864172033,0.754005626400808,0.994782360205754,0.779856348476481,0,0.648414149624083,0.398282546508734,1.32767530667157,1.48523066392647,0,1.4255592949172,0.581857461502877,0.771494018793504,1.26473074248515,1.62371162777562,1.56998727841375,1.48076596706161,1.48226313543574,0.667380422864376,0.196558995113203,1.34917267430912,1.01430060694251,0.241177159752417,0.763877555344259,0.863088412352432,0,0.549122826376163,0,0.744281895337007,0.936113019343682,0.757736633841335,0.896987067609561,0,0.369506380333209,0.757965647081939,0.977789858652155,0.339490171550376,0.704070744865506,1.17254380209271,2.14239276797412,1.36593553500459,0.788175720530955,0.44292937929755,1.43509291791738,1.14704320301017,1.20879487306127,1.44649058581512,1.50791283939272,0,2.45882136509518,0.827810238914197,0.321101179975584,0.234423373184406,0.163934945376675,0.504941854408746,1.57754109708128,0.780877488593277,0.861693590931196,1.43381278771531,2.22798674082394,1.69845918473299,1.21443210502468,0.876767573733936,2.37172666767914,0.321321316421807,0.425820255624806,0.890328018336276,0.81443479676788,0.824850614862677,0,0.485561272309963,0.906970670894253,0.188605079755898,0.295301892880773,1.53717573971964,1.29214146584111,0.363533729477506,0,1.58018378967908,1.05418608574999,0,1.36175842301515,1.08036656418786,1.29358683782755,2.57204442037911,1.59606210278046,1.42695054081656,0.164549020602121,0.913394847343798,0.704015124191131,1.27099242518292,0.661585194164886,1.15420377059036,0.322928853391811,1.14594557363496,0.119372344003136,0.492422699235184,0.291480836629851,0.18542530201051,0.683483523191411,0.82554747185289,1.11116716421827,0.376736914009382,0.820165366326151,0.915112692826091,3.90950388985867,4.61839792668071,3.31679937130617,0,1.10717597753397,0,0.540026704109006,1.04544148007234,0.655087691238533,0.539457385539283,0.165306911450672,0,1.29614973291793,1.24267862617385,2.25477175473676,1.04661582230785,1.65458490457098,0.972255941720238,0.774958940866387,1.18269287843545,0.58678619322877,0.781226309063701,1.04859344425711,2.65742532908607,2.30424005006292,0.316011120628178,0.810900861160657,0.718976700153791,0.909445760844565,1.07416017400489,0.39736270956253,1.20195449519969,1.47689527174577,1.11063094942962,0.762068066549998,0.604957110821043,0.877120926657772,1.82802499116626,1.8700304349051,0.226730383615211,0.221985953374065,0.717710852875806,0.335769232728157,0.386379188064381,0.375364950902364,0.915758121336325,0.214368379079066,1.00314420807073,0,0.460325236507177,0,0.171853182343688,0,0,0.675022500231806,0,0,0,0.31136204275253,0.798049746802062,0.512200817262403,1.21553358534147,0.628839487883947,0.919217542250071,0.222246727801615,0.824140228955577,0,0.505394423527595,0.760437899670719,0.377252682772152,0.468207537349412,0.512201219238954,0.574354689556133,0.952587382566147,0.463537303779422,0.964546102318525,0.412085900803307,0,0.342869252385415,0.354951612318675,1.66905332963125,0.290692833264657,0.752875043322645,0.761531471025089,0.365855945745545,0.526139422875686,0.135804113845862,1.12228454331548,0.237270036248348,0.788035859004508,0,0.309873682371932,0.578719832943424,0.249810577937946,0.467863216890817,0,0.382576664137687,0.220591419119515,0.695603506861264 | |||
|short_description=p@chr2:34726609..34726633,+ | |||
}} | |||
Revision as of 23:53, 13 September 2013
| Short description: | p@chr2:34726609..34726633, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr2:34726609..34726633, + |
| Coexpression cluster: | MCL_coexpression_mm9:231 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 1.37e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
