FFCP PHASE1:Mm9::chr12:62799947..62799951,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=236|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:62799947..62799951,+|id=chr12:62799947..62799951,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.94e-15!52;UBERON:0005068!1.94e-15!52;UBERON:0006241!1.94e-15!52;UBERON:0007135!1.94e-15!52;UBERON:0002021!7.25e-15!10;UBERON:0000411!7.25e-15!10;UBERON:0001950!7.25e-15!10;UBERON:0003080!5.40e-14!40;UBERON:0000955!4.52e-13!50;UBERON:0006238!4.52e-13!50;UBERON:0002780!8.03e-13!39;UBERON:0001890!8.03e-13!39;UBERON:0006240!8.03e-13!39;UBERON:0002619!2.59e-12!17;UBERON:0003056!6.46e-12!49;UBERON:0002616!6.81e-12!49;UBERON:0002020!7.90e-12!34;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002346!6.18e-11!71;UBERON:0003075!6.18e-11!71;UBERON:0007284!6.18e-11!71;UBERON:0002791!1.17e-10!29;UBERON:0003528!1.17e-10!29;UBERON:0001893!1.17e-10!29;UBERON:0001017!1.35e-10!73;UBERON:0005743!1.35e-10!73;UBERON:0000033!1.83e-10!63;UBERON:0000073!3.64e-10!75;UBERON:0001016!3.64e-10!75;UBERON:0004121!9.14e-07!102;UBERON:0000924!9.14e-07!102;UBERON:0006601!9.14e-07!102|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.57e-18,10;UBERON:0000411,1.57e-18,10;UBERON:0001950,1.57e-18,10;UBERON:0002619,1.86e-11,17;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.695297280769106,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,6.53042092906013,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p@chr12:62799947..62799951,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=236 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:62799947..62799951,+ | |||
|id=chr12:62799947..62799951,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-15!52;UBERON:0005068!1.94e-15!52;UBERON:0006241!1.94e-15!52;UBERON:0007135!1.94e-15!52;UBERON:0002021!7.25e-15!10;UBERON:0000411!7.25e-15!10;UBERON:0001950!7.25e-15!10;UBERON:0003080!5.40e-14!40;UBERON:0000955!4.52e-13!50;UBERON:0006238!4.52e-13!50;UBERON:0002780!8.03e-13!39;UBERON:0001890!8.03e-13!39;UBERON:0006240!8.03e-13!39;UBERON:0002619!2.59e-12!17;UBERON:0003056!6.46e-12!49;UBERON:0002616!6.81e-12!49;UBERON:0002020!7.90e-12!34;UBERON:0000956!1.05e-11!21;UBERON:0001869!1.05e-11!21;UBERON:0000203!1.05e-11!21;UBERON:0002346!6.18e-11!71;UBERON:0003075!6.18e-11!71;UBERON:0007284!6.18e-11!71;UBERON:0002791!1.17e-10!29;UBERON:0003528!1.17e-10!29;UBERON:0001893!1.17e-10!29;UBERON:0001017!1.35e-10!73;UBERON:0005743!1.35e-10!73;UBERON:0000033!1.83e-10!63;UBERON:0000073!3.64e-10!75;UBERON:0001016!3.64e-10!75;UBERON:0004121!9.14e-07!102;UBERON:0000924!9.14e-07!102;UBERON:0006601!9.14e-07!102 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,1.57e-18,10;UBERON:0000411,1.57e-18,10;UBERON:0001950,1.57e-18,10;UBERON:0002619,1.86e-11,17;UBERON:0000956,1.61e-09,21;UBERON:0001869,1.61e-09,21;UBERON:0000203,1.61e-09,21;UBERON:0003528,3.14e-07,29;UBERON:0002791,3.14e-07,29;UBERON:0001893,3.14e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0.294628585473668,0.284743361598206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0.149790639404823,0,0.125654352112864,0.695297280769106,0,0.20778804455956,0.162241263067758,0,0,0,0,0,0,0,0,0,0.12811372028485,0,0,0,0,0.351902248327898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,6.53042092906013,0.685082519770642,0.755393897389701,0.675022500231806,0.900642406448441,2.26571204492102,0.51776031175182,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0,0,0,0,0,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr12:62799947..62799951,+ | |||
}} |
Revision as of 23:01, 12 September 2013
Short description: | p@chr12:62799947..62799951, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:62799947..62799951, + |
Coexpression cluster: | MCL_coexpression_mm9:236 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 1.57e-18 | 10 |
visual cortex | 1.57e-18 | 10 |
neocortex | 1.57e-18 | 10 |
regional part of cerebral cortex | 1.86e-11 | 17 |
cerebral cortex | 1.61e-09 | 21 |
cerebral hemisphere | 1.61e-09 | 21 |
pallium | 1.61e-09 | 21 |
brain grey matter | 3.14e-07 | 29 |
regional part of telencephalon | 3.14e-07 | 29 |
telencephalon | 3.14e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.