FFCP PHASE1:Mm9::chr16:8792395..8792419,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=252870|HGNC=|MCL_coexpression_id=97|UniProt=E9PXY8|association_with_transcript=0bp_to_ENSMUST00000160405,uc007ycz.1_5end|description=CAGE_peak_3_at_Usp7_5end|id=chr16:8792395..8792419,-|ontology_enrichment_celltype=CL:0000349!2.33e-09!3;CL:0000351!2.33e-09!3|ontology_enrichment_celltype_v019_2=CL:0000349,1.28e-16,3;CL:0000351,1.28e-16,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!1.60e-33!18;UBERON:0005564!1.60e-33!18;UBERON:0005156!7.59e-32!26;UBERON:0000990!7.59e-32!26;UBERON:0003133!2.23e-31!24;UBERON:0004176!3.28e-31!17;UBERON:0009196!3.28e-31!17;UBERON:0009117!3.28e-31!17;UBERON:0000473!8.56e-25!14;UBERON:0003135!5.86e-23!15;UBERON:0003101!2.36e-21!16;UBERON:0000079!2.36e-21!16;UBERON:0002323!2.40e-14!37;UBERON:0004458!2.40e-14!37;UBERON:0003886!7.18e-14!38;UBERON:0002553!2.03e-13!39;UBERON:0000474!1.70e-09!9;UBERON:0000358!2.33e-09!3;UBERON:0000307!2.33e-09!3;UBERON:0000464!3.30e-09!57;UBERON:0005631!5.76e-09!3;UBERON:0000478!5.76e-09!3;UBERON:0000158!5.76e-09!3;UBERON:0000992!7.16e-08!3;UBERON:0003134!8.15e-08!8;UBERON:0003100!1.22e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.18e-37,24;UBERON:0000991,7.34e-37,18;UBERON:0005564,7.34e-37,18;UBERON:0005156,1.29e-34,26;UBERON:0000990,1.29e-34,26;UBERON:0000473,2.40e-33,14;UBERON:0004176,6.96e-33,17;UBERON:0009196,6.96e-33,17;UBERON:0009117,6.96e-33,17;UBERON:0003135,4.85e-31,15;UBERON:0003101,5.06e-29,16;UBERON:0000079,5.06e-29,16;UBERON:0002323,4.37e-17,37;UBERON:0004458,4.37e-17,37;UBERON:0000358,1.28e-16,3;UBERON:0000307,1.28e-16,3;UBERON:0007010,1.28e-16,3;UBERON:0003886,1.36e-16,38;UBERON:0002553,4.02e-16,39;UBERON:0005631,7.32e-16,3;UBERON:0000478,7.32e-16,3;UBERON:0000158,7.32e-16,3;UBERON:0001987,4.38e-11,2;UBERON:0003124,4.38e-11,2;UBERON:0004340,4.38e-11,2;UBERON:0000926,5.67e-07,120;UBERON:0004120,5.67e-07,120;UBERON:0006603,5.67e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98941903708308,15.6755732439227,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,5.23307911153926,4.30192075188454,1.55560950675238,2.19571699912143,0.675824501963113,1.05621514781179,3.9061315453185,9.43734099831398,5.31485065817213,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6319351459875,75.8979226916164,63.1246157528935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Usp7}} | ||
|EntrezGene=252870 | |||
|HGNC= | |||
|MCL_coexpression_id=97 | |||
|UniProt=E9PXY8 | |||
|association_with_transcript=0bp_to_ENSMUST00000160405,uc007ycz.1_5end | |||
|description=CAGE_peak_3_at_Usp7_5end | |||
|id=chr16:8792395..8792419,- | |||
|ontology_enrichment_celltype=CL:0000349!2.33e-09!3;CL:0000351!2.33e-09!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.28e-16,3;CL:0000351,1.28e-16,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.60e-33!18;UBERON:0005564!1.60e-33!18;UBERON:0005156!7.59e-32!26;UBERON:0000990!7.59e-32!26;UBERON:0003133!2.23e-31!24;UBERON:0004176!3.28e-31!17;UBERON:0009196!3.28e-31!17;UBERON:0009117!3.28e-31!17;UBERON:0000473!8.56e-25!14;UBERON:0003135!5.86e-23!15;UBERON:0003101!2.36e-21!16;UBERON:0000079!2.36e-21!16;UBERON:0002323!2.40e-14!37;UBERON:0004458!2.40e-14!37;UBERON:0003886!7.18e-14!38;UBERON:0002553!2.03e-13!39;UBERON:0000474!1.70e-09!9;UBERON:0000358!2.33e-09!3;UBERON:0000307!2.33e-09!3;UBERON:0000464!3.30e-09!57;UBERON:0005631!5.76e-09!3;UBERON:0000478!5.76e-09!3;UBERON:0000158!5.76e-09!3;UBERON:0000992!7.16e-08!3;UBERON:0003134!8.15e-08!8;UBERON:0003100!1.22e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003133,1.18e-37,24;UBERON:0000991,7.34e-37,18;UBERON:0005564,7.34e-37,18;UBERON:0005156,1.29e-34,26;UBERON:0000990,1.29e-34,26;UBERON:0000473,2.40e-33,14;UBERON:0004176,6.96e-33,17;UBERON:0009196,6.96e-33,17;UBERON:0009117,6.96e-33,17;UBERON:0003135,4.85e-31,15;UBERON:0003101,5.06e-29,16;UBERON:0000079,5.06e-29,16;UBERON:0002323,4.37e-17,37;UBERON:0004458,4.37e-17,37;UBERON:0000358,1.28e-16,3;UBERON:0000307,1.28e-16,3;UBERON:0007010,1.28e-16,3;UBERON:0003886,1.36e-16,38;UBERON:0002553,4.02e-16,39;UBERON:0005631,7.32e-16,3;UBERON:0000478,7.32e-16,3;UBERON:0000158,7.32e-16,3;UBERON:0001987,4.38e-11,2;UBERON:0003124,4.38e-11,2;UBERON:0004340,4.38e-11,2;UBERON:0000926,5.67e-07,120;UBERON:0004120,5.67e-07,120;UBERON:0006603,5.67e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0.22836775943812,0,0,0,0,0,0,0,0,5.43828929015623,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79130840136644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56134093729095,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.98941903708308,15.6755732439227,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,2.81846469342095,5.23307911153926,4.30192075188454,1.55560950675238,2.19571699912143,0.675824501963113,1.05621514781179,3.9061315453185,9.43734099831398,5.31485065817213,4.03242008761012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.6319351459875,75.8979226916164,63.1246157528935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Usp7 | |||
}} |
Revision as of 13:13, 13 September 2013
Short description: | p3@Usp7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Usp7_5end |
Coexpression cluster: | MCL_coexpression_mm9:97 |
Association with transcript: | 0bp_to_ENSMUST00000160405, uc007ycz.1_5end |
EntrezGene: | Usp7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.28e-16 | 3 |
trophoblast cell | 1.28e-16 | 3 |
Ontology term | p-value | n |
---|---|---|
reproductive organ | 1.18e-37 | 24 |
gonad | 7.34e-37 | 18 |
gonad primordium | 7.34e-37 | 18 |
reproductive structure | 1.29e-34 | 26 |
reproductive system | 1.29e-34 | 26 |
testis | 2.40e-33 | 14 |
external genitalia | 6.96e-33 | 17 |
indifferent external genitalia | 6.96e-33 | 17 |
indifferent gonad | 6.96e-33 | 17 |
male reproductive organ | 4.85e-31 | 15 |
male organism | 5.06e-29 | 16 |
male reproductive system | 5.06e-29 | 16 |
body cavity | 4.37e-17 | 37 |
body cavity or lining | 4.37e-17 | 37 |
blastocyst | 1.28e-16 | 3 |
blastula | 1.28e-16 | 3 |
cleaving embryo | 1.28e-16 | 3 |
body cavity precursor | 1.36e-16 | 38 |
anatomical cavity | 4.02e-16 | 39 |
extraembryonic membrane | 7.32e-16 | 3 |
extraembryonic structure | 7.32e-16 | 3 |
membranous layer | 7.32e-16 | 3 |
placenta | 4.38e-11 | 2 |
chorion | 4.38e-11 | 2 |
allantois | 4.38e-11 | 2 |
mesoderm | 5.67e-07 | 120 |
mesoderm-derived structure | 5.67e-07 | 120 |
presumptive mesoderm | 5.67e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.