FFCP PHASE1:Mm9::chr16:62814513..62814529,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68159|HGNC=|MCL_coexpression_id=37|UniProt=Q8R1Q0|association_with_transcript=11bp_to_ENSMUST00000055557,NM_026588,uc007zpv.1_5end|description=CAGE_peak_1_at_Stx19_5end|id=chr16:62814513..62814529,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005153!2.27e-14!17;UBERON:0002048!3.87e-13!14;UBERON:0000117!3.87e-13!14;UBERON:0000171!3.87e-13!14;UBERON:0000170!3.87e-13!14;UBERON:0005597!3.87e-13!14;UBERON:0000118!3.87e-13!14;UBERON:0005178!1.68e-11!17;UBERON:0005181!1.68e-11!17;UBERON:0002224!1.68e-11!17;UBERON:0000915!1.68e-11!17;UBERON:0008947!1.68e-11!17;UBERON:0003258!1.68e-11!17;UBERON:0005157!3.17e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.85e-22,17;UBERON:0002048,1.90e-18,14;UBERON:0000117,1.90e-18,14;UBERON:0000171,1.90e-18,14;UBERON:0000170,1.90e-18,14;UBERON:0005597,1.90e-18,14;UBERON:0000118,1.90e-18,14;UBERON:0005157,1.96e-18,20;UBERON:0005178,7.55e-15,17;UBERON:0005181,7.55e-15,17;UBERON:0002224,7.55e-15,17;UBERON:0000915,7.55e-15,17;UBERON:0008947,7.55e-15,17;UBERON:0003258,7.55e-15,17;UBERON:0000014,2.94e-13,5;UBERON:0001003,2.94e-13,5;UBERON:0002097,2.94e-13,5;UBERON:0002199,2.94e-13,5;UBERON:0007029,2.94e-13,5;UBERON:0007376,2.94e-13,5;UBERON:0002416,2.94e-13,5;UBERON:0007383,2.94e-13,5;UBERON:0000945,6.09e-10,16;UBERON:0010039,6.09e-10,16;UBERON:0001041,1.30e-08,80;UBERON:0003102,1.56e-08,22;UBERON:0001911,2.29e-07,2;UBERON:0000076,2.29e-07,2;UBERON:0005333,2.29e-07,2;UBERON:0008425,2.29e-07,2;UBERON:0005311,2.29e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.758168275301024,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.556094498451196,1.0447564995665,2.46938563689532,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14080423283228,0,0.325929952884052,0.678980343100753,0.704070744865506,1.17254380209271,2.85652369063216,2.53673742215138,3.4679731703362,1.55025282754142,3.6674596791222,4.58817281204066,6.21665934717224,6.79850575333104,0,0,39.3411418415229,11.313406598494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0.428674070063185,1.06404140185364,1.07021290561242,0.987294123612726,0,0,0,0,1.48397627647332,2.26050197374268,2.71408162176701,2.86493625607528,1.64140899745061,0,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0.158167996790568,1.21991680276109,1.18805874903981,2.09088296014469,5.02233896616208,3.10187996685088,2.14898984885873,5.49687478166462,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,7.70883304291719,0,0,0,0.19318959403219,0,0.183151624267265,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0.935726433781634,0,0,1.10295709559758,0|short_description=p1@Stx19}} | ||
|EntrezGene=68159 | |||
|HGNC= | |||
|MCL_coexpression_id=37 | |||
|UniProt=Q8R1Q0 | |||
|association_with_transcript=11bp_to_ENSMUST00000055557,NM_026588,uc007zpv.1_5end | |||
|description=CAGE_peak_1_at_Stx19_5end | |||
|id=chr16:62814513..62814529,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005153!2.27e-14!17;UBERON:0002048!3.87e-13!14;UBERON:0000117!3.87e-13!14;UBERON:0000171!3.87e-13!14;UBERON:0000170!3.87e-13!14;UBERON:0005597!3.87e-13!14;UBERON:0000118!3.87e-13!14;UBERON:0005178!1.68e-11!17;UBERON:0005181!1.68e-11!17;UBERON:0002224!1.68e-11!17;UBERON:0000915!1.68e-11!17;UBERON:0008947!1.68e-11!17;UBERON:0003258!1.68e-11!17;UBERON:0005157!3.17e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,3.85e-22,17;UBERON:0002048,1.90e-18,14;UBERON:0000117,1.90e-18,14;UBERON:0000171,1.90e-18,14;UBERON:0000170,1.90e-18,14;UBERON:0005597,1.90e-18,14;UBERON:0000118,1.90e-18,14;UBERON:0005157,1.96e-18,20;UBERON:0005178,7.55e-15,17;UBERON:0005181,7.55e-15,17;UBERON:0002224,7.55e-15,17;UBERON:0000915,7.55e-15,17;UBERON:0008947,7.55e-15,17;UBERON:0003258,7.55e-15,17;UBERON:0000014,2.94e-13,5;UBERON:0001003,2.94e-13,5;UBERON:0002097,2.94e-13,5;UBERON:0002199,2.94e-13,5;UBERON:0007029,2.94e-13,5;UBERON:0007376,2.94e-13,5;UBERON:0002416,2.94e-13,5;UBERON:0007383,2.94e-13,5;UBERON:0000945,6.09e-10,16;UBERON:0010039,6.09e-10,16;UBERON:0001041,1.30e-08,80;UBERON:0003102,1.56e-08,22;UBERON:0001911,2.29e-07,2;UBERON:0000076,2.29e-07,2;UBERON:0005333,2.29e-07,2;UBERON:0008425,2.29e-07,2;UBERON:0005311,2.29e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.216491041011214,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0.758168275301024,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0.189106080167819,0.175951124163949,0,0.556094498451196,1.0447564995665,2.46938563689532,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0.268273401399619,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14080423283228,0,0.325929952884052,0.678980343100753,0.704070744865506,1.17254380209271,2.85652369063216,2.53673742215138,3.4679731703362,1.55025282754142,3.6674596791222,4.58817281204066,6.21665934717224,6.79850575333104,0,0,39.3411418415229,11.313406598494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0.485561272309963,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0,0,0.428674070063185,1.06404140185364,1.07021290561242,0.987294123612726,0,0,0,0,1.48397627647332,2.26050197374268,2.71408162176701,2.86493625607528,1.64140899745061,0,0,0,0,0,0,0,0,0,0,0,7.63736494412091,0.158167996790568,1.21991680276109,1.18805874903981,2.09088296014469,5.02233896616208,3.10187996685088,2.14898984885873,5.49687478166462,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,7.70883304291719,0,0,0,0.19318959403219,0,0.183151624267265,4.71610433973945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729320151204882,0.628839487883947,0,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.37456602987953,0.192075457214608,0.114870937911227,0.476293691283074,0,0.192909220463705,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0,0.282328141245992,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.394017929502254,0,0.154936841185966,0.771626443924566,0.749431733813838,0.935726433781634,0,0,1.10295709559758,0 | |||
|short_description=p1@Stx19 | |||
}} |
Revision as of 12:59, 13 September 2013
Short description: | p1@Stx19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Stx19_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | 11bp_to_ENSMUST00000055557, NM_026588, uc007zpv.1_5end |
EntrezGene: | Stx19 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial bud | 3.85e-22 | 17 |
lung | 1.90e-18 | 14 |
respiratory tube | 1.90e-18 | 14 |
respiration organ | 1.90e-18 | 14 |
pair of lungs | 1.90e-18 | 14 |
lung primordium | 1.90e-18 | 14 |
lung bud | 1.90e-18 | 14 |
epithelial fold | 1.96e-18 | 20 |
thoracic cavity element | 7.55e-15 | 17 |
thoracic segment organ | 7.55e-15 | 17 |
thoracic cavity | 7.55e-15 | 17 |
thoracic segment of trunk | 7.55e-15 | 17 |
respiratory primordium | 7.55e-15 | 17 |
endoderm of foregut | 7.55e-15 | 17 |
zone of skin | 2.94e-13 | 5 |
skin epidermis | 2.94e-13 | 5 |
skin of body | 2.94e-13 | 5 |
integument | 2.94e-13 | 5 |
surface | 2.94e-13 | 5 |
outer epithelium | 2.94e-13 | 5 |
integumental system | 2.94e-13 | 5 |
enveloping layer of ectoderm | 2.94e-13 | 5 |
stomach | 6.09e-10 | 16 |
food storage organ | 6.09e-10 | 16 |
foregut | 1.30e-08 | 80 |
surface structure | 1.56e-08 | 22 |
mammary gland | 2.29e-07 | 2 |
external ectoderm | 2.29e-07 | 2 |
mammary bud | 2.29e-07 | 2 |
mammary ridge | 2.29e-07 | 2 |
mammary placode | 2.29e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.