FFCP PHASE1:Mm9::chr6:85382005..85382039,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=232187|HGNC=|MCL_coexpression_id=68|UniProt=|association_with_transcript=9bp_to_ENSMUST00000152218_5end|description=CAGE_peak_2_at_Smyd5_5end|id=chr6:85382005..85382039,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!4.01e-09!34;UBERON:0002791!9.12e-07!29;UBERON:0003528!9.12e-07!29;UBERON:0001893!9.12e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.42e-09,34;UBERON:0003528,8.17e-07,29;UBERON:0002791,8.17e-07,29;UBERON:0001893,8.17e-07,29|phase1_expression=1.76163731815273,0,0,0,0,0.33575854382378,0.233612640595526,1.03298658753261,9.29205566201001,11.4691617897777,45.2015436115333,43.9544596064304,1.19840510951844,1.39872643870396,3.33109761815663,2.83465374345756,2.79824751251259,1.89277299214943,2.60517423850904,2.97072756258621,2.04103896362567,1.48936426801328,3.39559725880616,0.639969691173627,1.37645568640302,0.57423196411502,0.86152399231815,0,0.380046838912748,0.252030129759931,0.443461021310609,19.6859508772486,11.6862309641068,15.8481681015439,0.288851619751275,0.997407872150954,0.816677425049476,0,0,0,0,0,0,3.65100772129174,3.85232338634155,2.75320128242522,0,1.30815093828268,2.19686182734472,2.13872888981712,1.53985063787899,4.31257693094915,2.01339127269284,1.45072428402269,0.672187598284928,3.08711323243136,2.57880095944881,1.54701627683233,4.04632921719196,5.81890077199236,6.33831403506179,6.77689064138264,6.22506357277798,3.1496490104849,5.93319817540185,4.2628806896766,2.39680088414724,2.68952813725088,1.34796496001021,2.8351247049655,1.68259969081106,5.71301968807607,3.97563373712904,2.81728838194394,2.58782771749238,1.83843757322004,2.20231761998777,2.93680877595932,3.22573719838111,3.29715719325485,5.94669683415663,4.16730696445408,3.35019598801657,3.37657566019008,2.75036845998258,5.30331453852602,5.97961059356232,8.01517617048792,7.49689313998522,2.41828992341714,1.44932244350839,0,5.439770669662,1.07940638327563,1.29955283489534,2.24013443548668,0.842666520790511,2.72688516124892,5.19572009205738,5.3000936176551,1.26759077799012,0,0,0,1.08245520505607,2.02687892380079,0.505524445014783,0.79928715803342,3.36619248741323,2.3750742250372,4.8575891494518,4.56698217468212,5.07354093963329,4.06951129492081,2.70454026412121,1.38233250462643,1.48316980640624,1.01219549843938,2.65383165584962,3.39710384889559,1.10420759230197,0.969750506270444,0,0.878342391034642,0.83778682725382,0.510914110417183,2.27648736561249,0.599902730993408,3.17675567682662,3.14560342750128,4.11750542536764,6.15706325353036,5.04090528557602,1.79000820131231,1.66230435647648,3.0825839982874,3.25885964321012,1.61729061793121,2.0217820674694,1.26265113531884,2.86264974517948,1.60931473103431,1.98068342785884,1.50704817835715,1.36072998302656,2.0498195245576,1.12442069471675,0.776110112217047,4.095791865724,3.78212160335639,4.04687585577082,4.60311038097907,2.78047249225598,1.39300866608867,2.67516777330327,3.58261680273288,2.1066395619397,6.43369767786788,3.9782889915383,3.52113813310353,3.75241695969754,3.06105504483725,2.3674473558521,1.37734962223183,1.23413690309903,1.16266972375204,1.3413670069981,1.28441876603886,1.31647879930784,0.656669856316381,0.243206428637567,0.292399974850665,0.878200461164203,0.268412837520744,5.67782861123144,4.21908910755066,0,0.528901133327089,4.47905326123991,4.18026009348789,3.09281907173024,1.21010114774006,1.55664630691409,0.380451252225118,0.949058123089023,0.988193728344065,1.25667604400135,0.994782360205754,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,3.98302592001472,2.97046132785295,5.63538678365402,1.62921062276251,1.55161989734101,1.05203729835478,0.758838445491087,0.442830443938806,0.31399745568275,0.370191491765402,1.48226313543574,4.67166296005063,3.53806191203765,3.37293168577281,3.85434230638156,1.92941727801933,2.03700681425136,0.863088412352432,2.91843408195064,0.823684239564244,5.75072826109418,1.86070473834252,1.5601883655728,0.505157755894224,1.97337154874103,0.964887042726734,0.739012760666419,5.11626811780309,4.4000543639347,3.56464680127895,2.11221223459652,0.502518772325447,1.6663054862021,1.17080188714679,0.788175720530955,1.55025282754142,1.43509291791738,0.655453258862952,1.03610989119537,0.723245292907558,0,4.35124547054968,3.44234991113325,6.34654516500885,1.28440471990234,1.64096361229084,9.18035694109382,0.252470927204373,2.52406575533005,3.51394869866975,0.646270193198397,1.91175038362042,2.00518806674155,1.13230612315533,1.61924280669958,2.04579100537918,2.37172666767914,1.28528526568723,2.2710413633323,5.1639025063504,1.95464351224291,1.81467135269789,1.32745138339963,3.15614827001476,4.23252979750651,1.50884063804718,5.02013217897314,1.22974059177571,1.80899805217755,1.81766864738753,3.20847640546249,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,2.70091641046965,2.58717367565509,1.92903331528433,1.06404140185364,2.67553226403106,1.31639216481697,1.8267896946876,3.52007562095566,1.27099242518292,0.882113592219848,1.48397627647332,1.13025098687134,2.11095237248546,2.26807453605959,1.80554989719567,0.874442509889552,2.96680483216816,3.07567585436135,3.30218988741156,1.85194527369712,1.88368457004691,1.6403307326523,1.60144721244566,3.56954702987096,2.37917468950219,1.52019971184866,0.954670618015114,3.00519193902079,2.03319467126849,2.05210147561422,2.29997125615916,1.74690050996942,2.56242258131159,0.826534557253359,0.26175594198403,0.388844919875379,3.10669656543463,2.25477175473676,3.13984746692355,3.47462829959905,4.4723773319131,2.97067593998782,2.87225413334323,3.40335992072686,1.95306577265925,2.20204623293993,0.724752362478018,0.576060012515731,1.89606672376907,3.85177909051312,4.82741498674688,2.98817892848929,3.58053391334963,1.39076948346885,2.88469078847925,2.06765338044408,2.1202954489111,1.600342939755,1.31074040677893,0.877120926657772,0.962118416403295,0.818138315270983,0.906921534460845,2.66383144048878,4.57540668708326,4.02923079273788,1.15913756419314,2.25218970541418,0.915758121336325,1.07184189539533,1.50471631210609,3.3885110557024,4.14292712856459,3.43737308063638,3.09335728218638,2.74033007908257,4.5323633843382,6.07520250208625,3.60256962579376,4.53142408984205,5.1776031175182,3.21740777510948,3.59122386060928,4.09760653809922,5.10524105843418,3.35381060204772,2.75765262675021,1.77797382241292,1.23621034343337,1.60459604795908,3.28506375292937,2.5347929989024,2.07488975524684,1.96647165686753,2.30490548657529,2.46972516509137,2.38146845641537,1.62238056322798,1.73618298417335,2.88460130562315,2.35518272215036,3.77156177623957,1.4198064492747,2.62279808942053,2.47088908274958,3.10560955370591,2.36920902096694,2.0122077016005,2.10455769150274,1.90125759384206,0.561142271657738,2.72860541685601,1.87158516513571,3.27384834535751,2.32405261778949,3.2794123866794,3.74715866906919,2.10538447600868,2.57845264857958,2.67803664896381,1.54413993383661,2.08681052058379|short_description=p2@Smyd5}} | ||
|EntrezGene=232187 | |||
|HGNC= | |||
|MCL_coexpression_id=68 | |||
|UniProt= | |||
|association_with_transcript=9bp_to_ENSMUST00000152218_5end | |||
|description=CAGE_peak_2_at_Smyd5_5end | |||
|id=chr6:85382005..85382039,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.01e-09!34;UBERON:0002791!9.12e-07!29;UBERON:0003528!9.12e-07!29;UBERON:0001893!9.12e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,3.42e-09,34;UBERON:0003528,8.17e-07,29;UBERON:0002791,8.17e-07,29;UBERON:0001893,8.17e-07,29 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0.33575854382378,0.233612640595526,1.03298658753261,9.29205566201001,11.4691617897777,45.2015436115333,43.9544596064304,1.19840510951844,1.39872643870396,3.33109761815663,2.83465374345756,2.79824751251259,1.89277299214943,2.60517423850904,2.97072756258621,2.04103896362567,1.48936426801328,3.39559725880616,0.639969691173627,1.37645568640302,0.57423196411502,0.86152399231815,0,0.380046838912748,0.252030129759931,0.443461021310609,19.6859508772486,11.6862309641068,15.8481681015439,0.288851619751275,0.997407872150954,0.816677425049476,0,0,0,0,0,0,3.65100772129174,3.85232338634155,2.75320128242522,0,1.30815093828268,2.19686182734472,2.13872888981712,1.53985063787899,4.31257693094915,2.01339127269284,1.45072428402269,0.672187598284928,3.08711323243136,2.57880095944881,1.54701627683233,4.04632921719196,5.81890077199236,6.33831403506179,6.77689064138264,6.22506357277798,3.1496490104849,5.93319817540185,4.2628806896766,2.39680088414724,2.68952813725088,1.34796496001021,2.8351247049655,1.68259969081106,5.71301968807607,3.97563373712904,2.81728838194394,2.58782771749238,1.83843757322004,2.20231761998777,2.93680877595932,3.22573719838111,3.29715719325485,5.94669683415663,4.16730696445408,3.35019598801657,3.37657566019008,2.75036845998258,5.30331453852602,5.97961059356232,8.01517617048792,7.49689313998522,2.41828992341714,1.44932244350839,0,5.439770669662,1.07940638327563,1.29955283489534,2.24013443548668,0.842666520790511,2.72688516124892,5.19572009205738,5.3000936176551,1.26759077799012,0,0,0,1.08245520505607,2.02687892380079,0.505524445014783,0.79928715803342,3.36619248741323,2.3750742250372,4.8575891494518,4.56698217468212,5.07354093963329,4.06951129492081,2.70454026412121,1.38233250462643,1.48316980640624,1.01219549843938,2.65383165584962,3.39710384889559,1.10420759230197,0.969750506270444,0,0.878342391034642,0.83778682725382,0.510914110417183,2.27648736561249,0.599902730993408,3.17675567682662,3.14560342750128,4.11750542536764,6.15706325353036,5.04090528557602,1.79000820131231,1.66230435647648,3.0825839982874,3.25885964321012,1.61729061793121,2.0217820674694,1.26265113531884,2.86264974517948,1.60931473103431,1.98068342785884,1.50704817835715,1.36072998302656,2.0498195245576,1.12442069471675,0.776110112217047,4.095791865724,3.78212160335639,4.04687585577082,4.60311038097907,2.78047249225598,1.39300866608867,2.67516777330327,3.58261680273288,2.1066395619397,6.43369767786788,3.9782889915383,3.52113813310353,3.75241695969754,3.06105504483725,2.3674473558521,1.37734962223183,1.23413690309903,1.16266972375204,1.3413670069981,1.28441876603886,1.31647879930784,0.656669856316381,0.243206428637567,0.292399974850665,0.878200461164203,0.268412837520744,5.67782861123144,4.21908910755066,0,0.528901133327089,4.47905326123991,4.18026009348789,3.09281907173024,1.21010114774006,1.55664630691409,0.380451252225118,0.949058123089023,0.988193728344065,1.25667604400135,0.994782360205754,0.779856348476481,1.79763881730844,0.216138049874694,0.199141273254367,3.98302592001472,2.97046132785295,5.63538678365402,1.62921062276251,1.55161989734101,1.05203729835478,0.758838445491087,0.442830443938806,0.31399745568275,0.370191491765402,1.48226313543574,4.67166296005063,3.53806191203765,3.37293168577281,3.85434230638156,1.92941727801933,2.03700681425136,0.863088412352432,2.91843408195064,0.823684239564244,5.75072826109418,1.86070473834252,1.5601883655728,0.505157755894224,1.97337154874103,0.964887042726734,0.739012760666419,5.11626811780309,4.4000543639347,3.56464680127895,2.11221223459652,0.502518772325447,1.6663054862021,1.17080188714679,0.788175720530955,1.55025282754142,1.43509291791738,0.655453258862952,1.03610989119537,0.723245292907558,0,4.35124547054968,3.44234991113325,6.34654516500885,1.28440471990234,1.64096361229084,9.18035694109382,0.252470927204373,2.52406575533005,3.51394869866975,0.646270193198397,1.91175038362042,2.00518806674155,1.13230612315533,1.61924280669958,2.04579100537918,2.37172666767914,1.28528526568723,2.2710413633323,5.1639025063504,1.95464351224291,1.81467135269789,1.32745138339963,3.15614827001476,4.23252979750651,1.50884063804718,5.02013217897314,1.22974059177571,1.80899805217755,1.81766864738753,3.20847640546249,2.52829406348653,2.10837217149998,1.03135543248187,1.70219802876894,2.70091641046965,2.58717367565509,1.92903331528433,1.06404140185364,2.67553226403106,1.31639216481697,1.8267896946876,3.52007562095566,1.27099242518292,0.882113592219848,1.48397627647332,1.13025098687134,2.11095237248546,2.26807453605959,1.80554989719567,0.874442509889552,2.96680483216816,3.07567585436135,3.30218988741156,1.85194527369712,1.88368457004691,1.6403307326523,1.60144721244566,3.56954702987096,2.37917468950219,1.52019971184866,0.954670618015114,3.00519193902079,2.03319467126849,2.05210147561422,2.29997125615916,1.74690050996942,2.56242258131159,0.826534557253359,0.26175594198403,0.388844919875379,3.10669656543463,2.25477175473676,3.13984746692355,3.47462829959905,4.4723773319131,2.97067593998782,2.87225413334323,3.40335992072686,1.95306577265925,2.20204623293993,0.724752362478018,0.576060012515731,1.89606672376907,3.85177909051312,4.82741498674688,2.98817892848929,3.58053391334963,1.39076948346885,2.88469078847925,2.06765338044408,2.1202954489111,1.600342939755,1.31074040677893,0.877120926657772,0.962118416403295,0.818138315270983,0.906921534460845,2.66383144048878,4.57540668708326,4.02923079273788,1.15913756419314,2.25218970541418,0.915758121336325,1.07184189539533,1.50471631210609,3.3885110557024,4.14292712856459,3.43737308063638,3.09335728218638,2.74033007908257,4.5323633843382,6.07520250208625,3.60256962579376,4.53142408984205,5.1776031175182,3.21740777510948,3.59122386060928,4.09760653809922,5.10524105843418,3.35381060204772,2.75765262675021,1.77797382241292,1.23621034343337,1.60459604795908,3.28506375292937,2.5347929989024,2.07488975524684,1.96647165686753,2.30490548657529,2.46972516509137,2.38146845641537,1.62238056322798,1.73618298417335,2.88460130562315,2.35518272215036,3.77156177623957,1.4198064492747,2.62279808942053,2.47088908274958,3.10560955370591,2.36920902096694,2.0122077016005,2.10455769150274,1.90125759384206,0.561142271657738,2.72860541685601,1.87158516513571,3.27384834535751,2.32405261778949,3.2794123866794,3.74715866906919,2.10538447600868,2.57845264857958,2.67803664896381,1.54413993383661,2.08681052058379 | |||
|short_description=p2@Smyd5 | |||
}} |
Revision as of 10:47, 14 September 2013
Short description: | p2@Smyd5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smyd5_5end |
Coexpression cluster: | MCL_coexpression_mm9:68 |
Association with transcript: | 9bp_to_ENSMUST00000152218_5end |
EntrezGene: | Smyd5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gray matter | 3.42e-09 | 34 |
brain grey matter | 8.17e-07 | 29 |
regional part of telencephalon | 8.17e-07 | 29 |
telencephalon | 8.17e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.