FFCP PHASE1:Mm9::chr16:87612804..87612809,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:87612804..87612809,-|id=chr16:87612804..87612809,-|ontology_enrichment_celltype=CL:0000181!3.94e-16!5;CL:0000417!3.94e-16!5;CL:0000668!3.94e-16!5;CL:0000412!3.94e-16!5;CL:0000182!3.94e-16!5;CL:0000414!1.98e-07!11;CL:0000557!8.14e-07!7|ontology_enrichment_celltype_v019_2=CL:0000057,2.59e-18,1;CL:0000632,2.59e-18,1;CL:0000355,8.40e-09,9;CL:0000151,5.46e-07,3;CL:0000499,5.46e-07,3;CL:0000327,5.46e-07,3|ontology_enrichment_disease=DOID:0060100!4.62e-16!3;DOID:4045!4.62e-16!3;DOID:0050686!2.76e-08!6|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6|ontology_enrichment_uberon=UBERON:0005256!1.96e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,2.92972141515835,5.4693474116666,0.523523743973798,17.6469446409304,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr16:87612804..87612809,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:87612804..87612809,- | |||
|id=chr16:87612804..87612809,- | |||
|ontology_enrichment_celltype=CL:0000181!3.94e-16!5;CL:0000417!3.94e-16!5;CL:0000668!3.94e-16!5;CL:0000412!3.94e-16!5;CL:0000182!3.94e-16!5;CL:0000414!1.98e-07!11;CL:0000557!8.14e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.59e-18,1;CL:0000632,2.59e-18,1;CL:0000355,8.40e-09,9;CL:0000151,5.46e-07,3;CL:0000499,5.46e-07,3;CL:0000327,5.46e-07,3 | |||
|ontology_enrichment_disease=DOID:0060100!4.62e-16!3;DOID:4045!4.62e-16!3;DOID:0050686!2.76e-08!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.99e-24,3;DOID:4045,2.99e-24,3;DOID:0050686,1.08e-12,6 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.96e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,8.40e-09,9;UBERON:0002036,8.40e-09,9;UBERON:0002385,8.40e-09,9;UBERON:0000486,8.40e-09,9;UBERON:0007503,8.40e-09,9;UBERON:0001015,8.40e-09,9;UBERON:0002329,8.40e-09,9;UBERON:0003082,8.40e-09,9;UBERON:0003059,8.40e-09,9;UBERON:0007282,8.40e-09,9;UBERON:0004290,8.40e-09,9;UBERON:0009618,8.40e-09,9;UBERON:0000383,5.10e-08,10;UBERON:0007524,2.24e-07,11;UBERON:0003077,2.24e-07,11;UBERON:0007285,2.24e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215471232685889,0,0,0,0,0,0,0,0,0,2.92972141515835,5.4693474116666,0.523523743973798,17.6469446409304,2.04913645487534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,1.72084775396277,0.679971333707751,0,0.649776417447669,0.448026887097336,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.776813650941515,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:87612804..87612809,- | |||
}} |
Revision as of 13:13, 13 September 2013
Short description: | p@chr16:87612804..87612809, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:87612804..87612809, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.59e-18 | 1 |
hepatic stellate cell | 2.59e-18 | 1 |
multi-potent skeletal muscle stem cell | 8.40e-09 | 9 |
secretory cell | 5.46e-07 | 3 |
stromal cell | 5.46e-07 | 3 |
extracellular matrix secreting cell | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 8.40e-09 | 9 |
striated muscle tissue | 8.40e-09 | 9 |
muscle tissue | 8.40e-09 | 9 |
multilaminar epithelium | 8.40e-09 | 9 |
epithelial vesicle | 8.40e-09 | 9 |
musculature | 8.40e-09 | 9 |
somite | 8.40e-09 | 9 |
myotome | 8.40e-09 | 9 |
presomitic mesoderm | 8.40e-09 | 9 |
presumptive segmental plate | 8.40e-09 | 9 |
dermomyotome | 8.40e-09 | 9 |
trunk paraxial mesoderm | 8.40e-09 | 9 |
musculature of body | 5.10e-08 | 10 |
dense mesenchyme tissue | 2.24e-07 | 11 |
paraxial mesoderm | 2.24e-07 | 11 |
presumptive paraxial mesoderm | 2.24e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.99e-24 | 3 |
muscle cancer | 2.99e-24 | 3 |
organ system cancer | 1.08e-12 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.