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FFCP PHASE1:Mm9::chr6:122289651..122289691,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=13619|HGNC=|MCL_coexpression_id=425|UniProt=E0CXV8,Q3V116,Q7TT35,E9Q3U4|association_with_transcript=0bp_to_ENSMUST00000159252,ENSMUST00000161054,ENSMUST00000161739,ENSMUST00000169419,uc009dpa.1,uc009dpc.1,uc009dpd.1_5end|description=CAGE_peak_2_at_Phc1_5end|id=chr6:122289651..122289691,-|ontology_enrichment_celltype=CL:0000540!1.54e-09!33;CL:0000047!1.54e-09!33;CL:0000031!1.54e-09!33;CL:0000404!1.54e-09!33;CL:0000117!3.44e-09!23;CL:0000337!3.44e-09!23;CL:0000393!2.17e-08!39;CL:0000211!2.17e-08!39;CL:0002319!4.14e-07!43;CL:0000221!5.06e-07!44;CL:0000133!5.06e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,8.11e-10,33;CL:0000047,8.11e-10,33;CL:0000031,8.11e-10,33;CL:0000404,8.11e-10,33;CL:0000117,1.81e-09,23;CL:0000337,1.81e-09,23;CL:0000393,1.29e-08,39;CL:0000211,1.29e-08,39;CL:0002319,3.58e-07,43;CL:0000221,4.38e-07,44;CL:0000133,4.38e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.79e-14!73;UBERON:0005743!2.79e-14!73;UBERON:0000073!2.40e-13!75;UBERON:0001016!2.40e-13!75;UBERON:0000033!3.43e-13!63;UBERON:0003056!7.68e-13!49;UBERON:0004121!1.90e-12!102;UBERON:0000924!1.90e-12!102;UBERON:0006601!1.90e-12!102;UBERON:0000153!4.38e-12!94;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0001049!1.69e-11!52;UBERON:0005068!1.69e-11!52;UBERON:0006241!1.69e-11!52;UBERON:0007135!1.69e-11!52;UBERON:0000955!9.56e-11!50;UBERON:0006238!9.56e-11!50;UBERON:0002616!2.52e-10!49;UBERON:0003080!3.08e-10!40;UBERON:0002780!4.08e-10!39;UBERON:0001890!4.08e-10!39;UBERON:0006240!4.08e-10!39;UBERON:0007811!1.83e-09!86;UBERON:0002020!1.71e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.43e-14,73;UBERON:0002346,1.39e-13,64;UBERON:0003075,1.39e-13,64;UBERON:0007284,1.39e-13,64;UBERON:0001016,2.53e-13,75;UBERON:0004121,5.04e-13,95;UBERON:0000924,5.04e-13,95;UBERON:0006601,5.04e-13,95;UBERON:0003056,6.54e-13,49;UBERON:0000073,2.74e-12,54;UBERON:0001049,9.75e-12,52;UBERON:0005068,9.75e-12,52;UBERON:0006241,9.75e-12,52;UBERON:0007135,9.75e-12,52;UBERON:0010371,1.87e-11,73;UBERON:0000955,9.97e-11,47;UBERON:0006238,9.97e-11,47;UBERON:0010314,1.45e-10,92;UBERON:0002616,2.71e-10,46;UBERON:0003080,3.16e-10,40;UBERON:0002780,4.24e-10,39;UBERON:0001890,4.24e-10,39;UBERON:0006240,4.24e-10,39;UBERON:0002020,2.03e-07,34|phase1_expression=2.88267924788629,0,0,0.30246421130683,0,0.503637815735669,0.700837921786577,0.645616617207881,3.37892933164,3.04283884218592,0.171217968225505,0.478632953972018,0.342401459862411,0.874204024189974,0,0.607425802169478,0.699561878128147,1.73504190947031,0.822686601634433,1.27316895539409,3.656861476496,1.29078236561151,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0,2.54012269383853,0.61506478758457,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,2.26614272356039,1.11514624341466,1.65192076945513,0,2.61630187656536,1.31811709640683,1.74986909166855,1.1198913730029,2.87505128729943,1.00669563634642,0.725362142011344,0.336093799142464,0.514518872071894,1.43266719969378,3.09403255366465,5.66486090406874,4.7609188134483,3.1691570175309,2.03306719241479,0.889294796111139,1.3498495759221,0,0.7104801149461,0.599200221036809,2.68952813725088,8.70992743391212,7.96535036156975,5.8890989178387,2.57085885963423,2.20868540951614,5.87955836231779,6.90087391331302,5.51531271966013,3.30347642998166,1.40456071893706,2.30409799884365,6.98997324970027,5.85520919055422,5.2091337055676,1.3959149950069,2.8138130501584,1.06958773443767,3.53554302568401,3.84403538157578,5.59198337475902,0.832988126665025,0.831287161174641,1.15945795480671,0,0,0,0,0,1.26399978118577,2.72688516124892,1.29893002301434,1.41335829804136,1.69012103732017,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,0.91347103775248,2.58937883647172,1.63286352971307,1.73485326766136,1.52232739156071,1.15307748628029,0.60289056221049,1.17588707135705,1.75933227861546,0.988779870937496,1.44599356919912,0.884610551949874,1.61766849947409,0.441683036920787,0.484875253135222,0,2.34224637609238,2.93225389538837,0.255457055208591,0.838705871541442,0,0.635351135365324,2.39665023047716,3.20250421973039,7.53926112677186,3.12883776346098,2.81287003063364,2.28566849015516,2.75810147215188,1.52759045775474,1.11966273549084,2.52722758433675,2.73574412652416,2.73252930221678,1.60931473103431,2.88099407688559,2.86339153887859,3.26575195926374,3.84341160854549,3.5606655332697,3.10444044886819,4.52692785158969,4.72765200419548,4.39877810409872,2.6303487891309,3.33656699070717,2.43776516565517,2.88094990971121,4.57778813682534,0.702213187313235,0.257347907114715,0,2.27838349789052,1.87620847984877,2.70093092191522,2.13070262026689,2.36117078096885,1.85120535464854,2.09280550275367,1.3413670069981,1.86824547787471,2.13927804887525,1.64167464079095,1.70244500046297,0.877199924551994,1.53685080703735,0.939444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|EntrezGene=13619
|HGNC=
|MCL_coexpression_id=425
|UniProt=E0CXV8,Q3V116,Q7TT35,E9Q3U4
|association_with_transcript=0bp_to_ENSMUST00000159252,ENSMUST00000161054,ENSMUST00000161739,ENSMUST00000169419,uc009dpa.1,uc009dpc.1,uc009dpd.1_5end
|description=CAGE_peak_2_at_Phc1_5end
|id=chr6:122289651..122289691,-
|ontology_enrichment_celltype=CL:0000540!1.54e-09!33;CL:0000047!1.54e-09!33;CL:0000031!1.54e-09!33;CL:0000404!1.54e-09!33;CL:0000117!3.44e-09!23;CL:0000337!3.44e-09!23;CL:0000393!2.17e-08!39;CL:0000211!2.17e-08!39;CL:0002319!4.14e-07!43;CL:0000221!5.06e-07!44;CL:0000133!5.06e-07!44
|ontology_enrichment_celltype_v019_2=CL:0000540,8.11e-10,33;CL:0000047,8.11e-10,33;CL:0000031,8.11e-10,33;CL:0000404,8.11e-10,33;CL:0000117,1.81e-09,23;CL:0000337,1.81e-09,23;CL:0000393,1.29e-08,39;CL:0000211,1.29e-08,39;CL:0002319,3.58e-07,43;CL:0000221,4.38e-07,44;CL:0000133,4.38e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!2.79e-14!73;UBERON:0005743!2.79e-14!73;UBERON:0000073!2.40e-13!75;UBERON:0001016!2.40e-13!75;UBERON:0000033!3.43e-13!63;UBERON:0003056!7.68e-13!49;UBERON:0004121!1.90e-12!102;UBERON:0000924!1.90e-12!102;UBERON:0006601!1.90e-12!102;UBERON:0000153!4.38e-12!94;UBERON:0002346!1.11e-11!71;UBERON:0003075!1.11e-11!71;UBERON:0007284!1.11e-11!71;UBERON:0001049!1.69e-11!52;UBERON:0005068!1.69e-11!52;UBERON:0006241!1.69e-11!52;UBERON:0007135!1.69e-11!52;UBERON:0000955!9.56e-11!50;UBERON:0006238!9.56e-11!50;UBERON:0002616!2.52e-10!49;UBERON:0003080!3.08e-10!40;UBERON:0002780!4.08e-10!39;UBERON:0001890!4.08e-10!39;UBERON:0006240!4.08e-10!39;UBERON:0007811!1.83e-09!86;UBERON:0002020!1.71e-07!34
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.43e-14,73;UBERON:0002346,1.39e-13,64;UBERON:0003075,1.39e-13,64;UBERON:0007284,1.39e-13,64;UBERON:0001016,2.53e-13,75;UBERON:0004121,5.04e-13,95;UBERON:0000924,5.04e-13,95;UBERON:0006601,5.04e-13,95;UBERON:0003056,6.54e-13,49;UBERON:0000073,2.74e-12,54;UBERON:0001049,9.75e-12,52;UBERON:0005068,9.75e-12,52;UBERON:0006241,9.75e-12,52;UBERON:0007135,9.75e-12,52;UBERON:0010371,1.87e-11,73;UBERON:0000955,9.97e-11,47;UBERON:0006238,9.97e-11,47;UBERON:0010314,1.45e-10,92;UBERON:0002616,2.71e-10,46;UBERON:0003080,3.16e-10,40;UBERON:0002780,4.24e-10,39;UBERON:0001890,4.24e-10,39;UBERON:0006240,4.24e-10,39;UBERON:0002020,2.03e-07,34
|phase1_expression=2.88267924788629,0,0,0.30246421130683,0,0.503637815735669,0.700837921786577,0.645616617207881,3.37892933164,3.04283884218592,0.171217968225505,0.478632953972018,0.342401459862411,0.874204024189974,0,0.607425802169478,0.699561878128147,1.73504190947031,0.822686601634433,1.27316895539409,3.656861476496,1.29078236561151,0.783599367416806,0.319984845586813,0.45881856213434,0.57423196411502,0.430761996159075,0.430942465371778,0.190023419456374,0.252030129759931,0,2.54012269383853,0.61506478758457,0,0.866554859253824,0.498703936075477,0.408338712524738,0,0,0,0,0,0,2.26614272356039,1.11514624341466,1.65192076945513,0,2.61630187656536,1.31811709640683,1.74986909166855,1.1198913730029,2.87505128729943,1.00669563634642,0.725362142011344,0.336093799142464,0.514518872071894,1.43266719969378,3.09403255366465,5.66486090406874,4.7609188134483,3.1691570175309,2.03306719241479,0.889294796111139,1.3498495759221,0,0.7104801149461,0.599200221036809,2.68952813725088,8.70992743391212,7.96535036156975,5.8890989178387,2.57085885963423,2.20868540951614,5.87955836231779,6.90087391331302,5.51531271966013,3.30347642998166,1.40456071893706,2.30409799884365,6.98997324970027,5.85520919055422,5.2091337055676,1.3959149950069,2.8138130501584,1.06958773443767,3.53554302568401,3.84403538157578,5.59198337475902,0.832988126665025,0.831287161174641,1.15945795480671,0,0,0,0,0,1.26399978118577,2.72688516124892,1.29893002301434,1.41335829804136,1.69012103732017,1.28326477414318,2.54805239706646,0,0.649473123033642,0.506719730950197,1.01104889002957,0.91347103775248,2.58937883647172,1.63286352971307,1.73485326766136,1.52232739156071,1.15307748628029,0.60289056221049,1.17588707135705,1.75933227861546,0.988779870937496,1.44599356919912,0.884610551949874,1.61766849947409,0.441683036920787,0.484875253135222,0,2.34224637609238,2.93225389538837,0.255457055208591,0.838705871541442,0,0.635351135365324,2.39665023047716,3.20250421973039,7.53926112677186,3.12883776346098,2.81287003063364,2.28566849015516,2.75810147215188,1.52759045775474,1.11966273549084,2.52722758433675,2.73574412652416,2.73252930221678,1.60931473103431,2.88099407688559,2.86339153887859,3.26575195926374,3.84341160854549,3.5606655332697,3.10444044886819,4.52692785158969,4.72765200419548,4.39877810409872,2.6303487891309,3.33656699070717,2.43776516565517,2.88094990971121,4.57778813682534,0.702213187313235,0.257347907114715,0,2.27838349789052,1.87620847984877,2.70093092191522,2.13070262026689,2.36117078096885,1.85120535464854,2.09280550275367,1.3413670069981,1.86824547787471,2.13927804887525,1.64167464079095,1.70244500046297,0.877199924551994,1.53685080703735,0.939444931322602,2.10289948564127,7.71784592844633,0.330418782983798,1.05780226665418,2.77274725695804,2.55460339046482,1.80414445850931,1.00841762311671,0.889512175379481,0.380451252225118,0.949058123089023,0.823494773620054,0,0.596869416123452,0.58489226135736,0.898819408654221,0.432276099749388,0.398282546508734,2.65535061334314,3.42745537829186,0,2.8511185898344,1.74557238450863,2.80543279561274,3.22506339333712,3.09981310757165,2.66897837330337,2.34454611451421,0,2.16898637430922,0.589676985339609,0.449724224769707,0,0.72353147925725,0,0.287696137450811,0.648540907100142,0.274561413188081,1.43768206527355,0.744281895337007,1.24815069245824,0,0.179397413521912,0.482443521363367,1.29327233116623,2.27389694124582,3.25929952884052,4.07388205860452,2.11221223459652,1.50755631697634,1.90434912708811,3.12213836572478,3.4679731703362,1.99318220683897,2.71073106717728,1.14704320301017,1.72684981865896,2.16973587872267,0,0.54390568381871,0.983528546038072,1.10374698521893,1.9266070798535,2.46144541843627,2.62295912602681,0.757412781613119,3.47059041357882,0.390438744296638,0.646270193198397,2.62865677747807,2.45078541490634,1.98153571552183,4.45291771842384,2.92255857911312,2.76701444562566,3.53453448063988,2.55492153374884,2.84904965867608,2.28041743095006,3.29940245945071,0,2.42780636154981,1.51161778482376,0.943025398779491,2.06711325016541,0.922305443831782,1.80899805217755,1.81766864738753,1.06949213515416,0.948110273807448,0,0,5.10659408630682,3.78128297465751,4.52755393239641,3.85806663056866,5.49754724291048,4.45922044005176,3.9491764944509,5.78483403317739,0.704015124191131,1.90648863777438,1.54369878638473,0.8244312647074,1.13025098687134,1.80938774784468,1.43246812803764,1.31312719796049,0.874442509889552,1.29797711407357,1.02522528478712,1.857481811669,1.66675074632741,0.376736914009382,0.546776910884101,0.686334519619568,1.5298058699447,1.39951452323658,3.31679937130617,0,4.4287039101359,1.01659733563424,2.37611749807963,2.29997125615916,2.40198820120795,2.02296519577231,1.57041565878138,1.57053565190418,0.648074866458964,2.4853572523477,3.38215763210514,6.13017838780313,4.30192075188454,1.94451188344048,2.84151611651008,3.54807863530634,3.75543163666413,3.51551839078665,3.67007705489988,3.14059357073808,3.45636007509439,1.26404448251271,1.62180172232131,2.36235201479103,1.68897069871134,1.79026695667481,0.993406773906324,2.64429988943931,1.18151621739662,1.71642964911851,1.5241361331,1.41156659191577,1.75424185331554,1.53938946624527,0.935015217452552,0.680191150845634,0.221985953374065,2.06341870201794,1.67884616364078,2.12508553435409,2.064507229963,1.46521299413812,2.35805216986972,1.50471631210609,4.51801474093653,0.460325236507177,4.01026859407578,1.54667864109319,2.05524755931193,0.755393897389701,2.70009000092722,2.2516060161211,0.906284817968409,1.03552062350364,3.84013186061454,5.1873233542134,3.07320490357441,2.43106717068294,1.88651846365184,1.47074806760011,1.77797382241292,3.29656091582231,0.962757628775446,1.51618327058278,2.28131369901216,1.88626341386076,1.87283014939765,2.56100609619477,2.81433797882505,0.952587382566147,2.0859178670074,2.31491064556446,0.824171801606613,1.32479028120958,2.40008476669791,2.48466128623072,2.38436189947321,1.45346416632329,1.59985946706062,2.28459441307527,1.28049581010941,2.10455769150274,2.58027816307137,1.12228454331548,1.89816028998679,2.1670986122624,2.04615521584845,2.16911577660352,0.964533054905707,1.99848462350357,1.16965804222704,0.859484216193193,0.191288332068843,0.882365676478062,0.695603506861264
|short_description=p2@Phc1
}}

Revision as of 08:46, 14 September 2013

Short description:p2@Phc1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Phc1_5end
Coexpression cluster:MCL_coexpression_mm9:425
Association with transcript: 0bp_to_ENSMUST00000159252, ENSMUST00000161054, ENSMUST00000161739, ENSMUST00000169419, uc009dpa.1, uc009dpc.1, uc009dpd.1_5end
EntrezGene:Phc1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Phc1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.88
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.65
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.38
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.48
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.34
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.87
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.74
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.82
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.27
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.66
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.29
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.78
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I32.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B31.65
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.01
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.51
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.43
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C35.66
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C73.17
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.03
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E82.69
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D58.71
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D95.89
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D25.88
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.90
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D65.52
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.40
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.30
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.86
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.21
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.54
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.83
Mouse Schwann, donor2.CNhs12573.11746-123F90.83
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.16
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E31.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.63
adrenal gland, embryo E14.CNhs11038.406-44C51.73
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C11.18
adrenal gland, neonate N25.CNhs11223.1377-27I31.76
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.62
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.64
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F17.54
cortex, adult.CNhs10473.12-14D53.13
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B22.76
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.53
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B22.53
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C92.88
eyeball, embryo E17.CNhs11023.1261-18D42.86
eyeball, neonate N00.CNhs11207.633-15C63.27
eyeball, neonate N01.CNhs11140.1532-43E73.84
eyeball, neonate N02.CNhs11205.1551-44G83.56
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E24.53
forelimb, embryo E12.CNhs10600.359-14H24.73
forelimb, embryo E13.CNhs10589.384-1E24.40
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I64.58
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.28
heart, embryo E12.CNhs11015.353-12F51.88
heart, embryo E13.CNhs11013.376-3I92.70
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C61.85
heart, embryo E17.CNhs11025.479-18E52.09
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.87
heart, neonate N03.CNhs11221.1349-25I22.14
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.70
heart, neonate N20.CNhs11127.821-26I60.88
heart, neonate N25.CNhs11196.1351-25D31.54
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.10
hippocampus, neonate N00.CNhs11228.627-43G17.72
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I52.77
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D81.80
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.89
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.82
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.60
intestine, neonate N10.CNhs11098.755-23A50.58
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I92.66
kidney, embryo E15.CNhs10997.434-16F83.43
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G72.81
kidney, neonate N10.CNhs11206.758-6D53.23
kidney, neonate N20.CNhs11113.832-19I13.10
kidney, neonate N25.CNhs11122.1353-25F32.67
kidney, neonate N30.CNhs11203.1385-42H12.34
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G22.27
lung, embryo E14.CNhs10604.404-26F83.26
lung, embryo E15.CNhs11020.432-17C54.07
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C63.12
lung, neonate N06.CNhs11212.683-20E53.47
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E62.71
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.10
medulla oblongata, adult.CNhs10477.17-12C21.93
medulla oblongata, neonate N30.CNhs11200.1396-42A32.46
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.62
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E13.47
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.63
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.98
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D44.45
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.77
olfactory brain, adult.CNhs10489.18-22I93.53
ovary, adult.CNhs10507.91-2I72.55
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I42.28
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D71.82
pancreas, neonate N02.CNhs11139.1539-43D81.07
pancreas, neonate N16.CNhs11136.787-43B60.95
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A53.86
pituitary gland, embryo E15.CNhs10592.427-16B95.50
pituitary gland, embryo E16.CNhs11036.449-43F64.46
pituitary gland, embryo E17.CNhs11039.1265-44F53.95
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G41.13
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C91.30
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C11.86
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.55
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.53
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D33.32
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D42.38
stomach, embryo E17.CNhs11006.1035-18D52.30
stomach, embryo E18.CNhs10999.1286-20C62.40
stomach, neonate N03.CNhs11193.1340-24B82.02
stomach, neonate N07.CNhs11210.718-18A91.57
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I10.65
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F56.13
testis, embryo E15.CNhs11034.443-27C54.30
testis, embryo E16.CNhs11033.470-26G51.94
testis, embryo E17.CNhs11029.486-18I52.84
testis, embryo E18.CNhs11027.503-18G53.55
testis, neonate N00.CNhs11189.1300-22B73.76
testis, neonate N07.CNhs11222.726-26I43.52
testis, neonate N10.CNhs11204.763-44D93.67
testis, neonate N20.CNhs11110.839-18H33.14
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B51.26
thymus, embryo E14.CNhs11041.402-44I41.62
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C51.69
thymus, embryo E17.CNhs10581.478-18C11.79
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.72
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.41
thymus, neonate N20.CNhs11186.820-7A21.75
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G20.94
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.06
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.68
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F52.06
uterus, adult.CNhs10509.92-27E51.47
vagina, adult.CNhs10502.89-27D52.36
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.01
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.55
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C95.19
whole body, embryo E13.CNhs10512.372-23H23.07
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.89
whole body, embryo E16.CNhs10514.453-14F21.47
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.89
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.87
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.81
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.09
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.48
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.10
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G52.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.17
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.05
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.70





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron8.11e-1033
neuronal stem cell8.11e-1033
neuroblast8.11e-1033
electrically signaling cell8.11e-1033
CNS neuron (sensu Vertebrata)1.81e-0923
neuroblast (sensu Vertebrata)1.81e-0923
electrically responsive cell1.29e-0839
electrically active cell1.29e-0839
neural cell3.58e-0743
ectodermal cell4.38e-0744
neurectodermal cell4.38e-0744







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