FFCP PHASE1:Mm9::chr17:8068242..8068258,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=233|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:8068242..8068258,+|id=chr17:8068242..8068258,+|ontology_enrichment_celltype=CL:0000791!3.68e-29!9;CL:0000789!3.68e-29!9;CL:0002420!3.68e-29!9;CL:0002419!3.68e-29!9;CL:0000790!3.68e-29!9;CL:0000624!4.48e-26!8;CL:0000838!4.89e-26!12;CL:0000542!6.86e-24!13;CL:0000051!6.86e-24!13;CL:0000084!1.44e-23!11;CL:0000827!1.44e-23!11;CL:0000893!5.66e-20!6;CL:0002489!5.66e-20!6;CL:0000898!5.66e-20!6;CL:0000809!5.66e-20!6;CL:0000810!5.66e-20!6;CL:0000895!5.66e-20!6;CL:0000808!5.66e-20!6;CL:0000894!5.66e-20!6;CL:0000806!5.66e-20!6;CL:0000807!5.66e-20!6;CL:0000805!5.66e-20!6;CL:0002425!5.66e-20!6;CL:0002436!5.66e-20!6;CL:0002427!5.66e-20!6;CL:0002428!5.66e-20!6;CL:0002429!5.66e-20!6;CL:0002433!5.66e-20!6;CL:0002431!5.66e-20!6;CL:0002432!5.66e-20!6;CL:0000988!1.59e-19!32;CL:0002032!1.59e-19!32;CL:0000037!1.59e-19!32;CL:0000566!1.59e-19!32;CL:0000837!1.59e-19!32;CL:0002031!2.39e-19!25;CL:0000738!7.99e-18!17;CL:0002087!7.99e-18!17;CL:0002320!1.25e-12!46;CL:0000134!1.25e-12!46;CL:0000219!2.67e-10!54;CL:0000034!4.08e-09!97;CL:0000063!7.19e-08!66;CL:0000723!9.03e-08!91;CL:0000048!9.03e-08!91|ontology_enrichment_celltype_v019_2=CL:0000791,4.56e-56,9;CL:0000789,4.56e-56,9;CL:0002420,4.56e-56,9;CL:0002419,4.56e-56,9;CL:0000790,4.56e-56,9;CL:0000624,6.00e-50,8;CL:0000084,9.37e-46,11;CL:0000827,9.37e-46,11;CL:0000838,6.94e-42,12;CL:0000542,1.31e-38,13;CL:0000051,1.31e-38,13;CL:0000893,7.40e-38,6;CL:0002489,7.40e-38,6;CL:0000898,7.40e-38,6;CL:0000809,7.40e-38,6;CL:0000810,7.40e-38,6;CL:0000895,7.40e-38,6;CL:0000808,7.40e-38,6;CL:0000894,7.40e-38,6;CL:0000806,7.40e-38,6;CL:0000807,7.40e-38,6;CL:0000805,7.40e-38,6;CL:0002425,7.40e-38,6;CL:0002436,7.40e-38,6;CL:0002427,7.40e-38,6;CL:0002428,7.40e-38,6;CL:0002429,7.40e-38,6;CL:0002433,7.40e-38,6;CL:0002431,7.40e-38,6;CL:0002432,7.40e-38,6;CL:0000738,2.38e-29,17;CL:0002087,2.38e-29,17;CL:0002031,1.07e-19,25;CL:0000988,3.38e-15,32;CL:0002032,3.38e-15,32;CL:0000037,3.38e-15,32;CL:0000837,3.38e-15,32;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000219,1.29e-08,54;CL:0000815,7.32e-08,1;CL:0000792,7.32e-08,1;CL:0000625,1.14e-07,1;CL:0000723,3.19e-07,91;CL:0000048,3.19e-07,91|ontology_enrichment_disease=DOID:0060100!1.61e-10!3;DOID:4045!1.61e-10!3|ontology_enrichment_disease_v019_2=DOID:0060100,1.97e-09,3;DOID:4045,1.97e-09,3|ontology_enrichment_uberon=UBERON:0002370!1.34e-14!23;UBERON:0000974!1.34e-14!23;UBERON:0004807!1.34e-14!23;UBERON:0005058!1.34e-14!23;UBERON:0003351!1.34e-14!23;UBERON:0009113!1.34e-14!23;UBERON:0003295!1.34e-14!23;UBERON:0009722!1.34e-14!23;UBERON:0005562!1.34e-14!23;UBERON:0007690!1.34e-14!23;UBERON:0006562!6.63e-14!24;UBERON:0003408!6.63e-14!24;UBERON:0001557!6.63e-14!24;UBERON:0001042!6.63e-14!24;UBERON:0008814!6.63e-14!24;UBERON:0009145!6.63e-14!24;UBERON:0002384!1.25e-12!46;UBERON:0000072!3.97e-12!27;UBERON:0004177!3.80e-11!29;UBERON:0002390!9.01e-11!45;UBERON:0003061!9.01e-11!45;UBERON:0002193!6.35e-10!48;UBERON:0000063!7.00e-09!35;UBERON:0000065!2.78e-07!41;UBERON:0001004!4.62e-07!42|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-10,46;UBERON:0002370,1.07e-09,23;UBERON:0000974,1.07e-09,23;UBERON:0004807,1.07e-09,23;UBERON:0005058,1.07e-09,23;UBERON:0003351,1.07e-09,23;UBERON:0009113,1.07e-09,23;UBERON:0003295,1.07e-09,23;UBERON:0009722,1.07e-09,23;UBERON:0005562,1.07e-09,23;UBERON:0007690,1.07e-09,23;UBERON:0006562,2.80e-09,24;UBERON:0003408,2.80e-09,24;UBERON:0001557,2.80e-09,24;UBERON:0001042,2.80e-09,24;UBERON:0008814,2.80e-09,24;UBERON:0009145,2.80e-09,24;UBERON:0000072,3.29e-08,27;UBERON:0004177,1.29e-07,29;UBERON:0005057,1.29e-07,29|phase1_expression=0,0,0,0,0,0,0,14.8491821957813,27.5945895417267,34.1734208430111,4.62288514208863,1.67521533890206,9.58724087614752,3.75907730401689,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,4.6880120671428,0.523523743973798,20.5881020810855,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:8068242..8068258,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=233 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:8068242..8068258,+ | |||
|id=chr17:8068242..8068258,+ | |||
|ontology_enrichment_celltype=CL:0000791!3.68e-29!9;CL:0000789!3.68e-29!9;CL:0002420!3.68e-29!9;CL:0002419!3.68e-29!9;CL:0000790!3.68e-29!9;CL:0000624!4.48e-26!8;CL:0000838!4.89e-26!12;CL:0000542!6.86e-24!13;CL:0000051!6.86e-24!13;CL:0000084!1.44e-23!11;CL:0000827!1.44e-23!11;CL:0000893!5.66e-20!6;CL:0002489!5.66e-20!6;CL:0000898!5.66e-20!6;CL:0000809!5.66e-20!6;CL:0000810!5.66e-20!6;CL:0000895!5.66e-20!6;CL:0000808!5.66e-20!6;CL:0000894!5.66e-20!6;CL:0000806!5.66e-20!6;CL:0000807!5.66e-20!6;CL:0000805!5.66e-20!6;CL:0002425!5.66e-20!6;CL:0002436!5.66e-20!6;CL:0002427!5.66e-20!6;CL:0002428!5.66e-20!6;CL:0002429!5.66e-20!6;CL:0002433!5.66e-20!6;CL:0002431!5.66e-20!6;CL:0002432!5.66e-20!6;CL:0000988!1.59e-19!32;CL:0002032!1.59e-19!32;CL:0000037!1.59e-19!32;CL:0000566!1.59e-19!32;CL:0000837!1.59e-19!32;CL:0002031!2.39e-19!25;CL:0000738!7.99e-18!17;CL:0002087!7.99e-18!17;CL:0002320!1.25e-12!46;CL:0000134!1.25e-12!46;CL:0000219!2.67e-10!54;CL:0000034!4.08e-09!97;CL:0000063!7.19e-08!66;CL:0000723!9.03e-08!91;CL:0000048!9.03e-08!91 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.56e-56,9;CL:0000789,4.56e-56,9;CL:0002420,4.56e-56,9;CL:0002419,4.56e-56,9;CL:0000790,4.56e-56,9;CL:0000624,6.00e-50,8;CL:0000084,9.37e-46,11;CL:0000827,9.37e-46,11;CL:0000838,6.94e-42,12;CL:0000542,1.31e-38,13;CL:0000051,1.31e-38,13;CL:0000893,7.40e-38,6;CL:0002489,7.40e-38,6;CL:0000898,7.40e-38,6;CL:0000809,7.40e-38,6;CL:0000810,7.40e-38,6;CL:0000895,7.40e-38,6;CL:0000808,7.40e-38,6;CL:0000894,7.40e-38,6;CL:0000806,7.40e-38,6;CL:0000807,7.40e-38,6;CL:0000805,7.40e-38,6;CL:0002425,7.40e-38,6;CL:0002436,7.40e-38,6;CL:0002427,7.40e-38,6;CL:0002428,7.40e-38,6;CL:0002429,7.40e-38,6;CL:0002433,7.40e-38,6;CL:0002431,7.40e-38,6;CL:0002432,7.40e-38,6;CL:0000738,2.38e-29,17;CL:0002087,2.38e-29,17;CL:0002031,1.07e-19,25;CL:0000988,3.38e-15,32;CL:0002032,3.38e-15,32;CL:0000037,3.38e-15,32;CL:0000837,3.38e-15,32;CL:0002320,2.76e-10,46;CL:0000134,2.76e-10,46;CL:0000219,1.29e-08,54;CL:0000815,7.32e-08,1;CL:0000792,7.32e-08,1;CL:0000625,1.14e-07,1;CL:0000723,3.19e-07,91;CL:0000048,3.19e-07,91 | |||
|ontology_enrichment_disease=DOID:0060100!1.61e-10!3;DOID:4045!1.61e-10!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.97e-09,3;DOID:4045,1.97e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002370!1.34e-14!23;UBERON:0000974!1.34e-14!23;UBERON:0004807!1.34e-14!23;UBERON:0005058!1.34e-14!23;UBERON:0003351!1.34e-14!23;UBERON:0009113!1.34e-14!23;UBERON:0003295!1.34e-14!23;UBERON:0009722!1.34e-14!23;UBERON:0005562!1.34e-14!23;UBERON:0007690!1.34e-14!23;UBERON:0006562!6.63e-14!24;UBERON:0003408!6.63e-14!24;UBERON:0001557!6.63e-14!24;UBERON:0001042!6.63e-14!24;UBERON:0008814!6.63e-14!24;UBERON:0009145!6.63e-14!24;UBERON:0002384!1.25e-12!46;UBERON:0000072!3.97e-12!27;UBERON:0004177!3.80e-11!29;UBERON:0002390!9.01e-11!45;UBERON:0003061!9.01e-11!45;UBERON:0002193!6.35e-10!48;UBERON:0000063!7.00e-09!35;UBERON:0000065!2.78e-07!41;UBERON:0001004!4.62e-07!42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.76e-10,46;UBERON:0002370,1.07e-09,23;UBERON:0000974,1.07e-09,23;UBERON:0004807,1.07e-09,23;UBERON:0005058,1.07e-09,23;UBERON:0003351,1.07e-09,23;UBERON:0009113,1.07e-09,23;UBERON:0003295,1.07e-09,23;UBERON:0009722,1.07e-09,23;UBERON:0005562,1.07e-09,23;UBERON:0007690,1.07e-09,23;UBERON:0006562,2.80e-09,24;UBERON:0003408,2.80e-09,24;UBERON:0001557,2.80e-09,24;UBERON:0001042,2.80e-09,24;UBERON:0008814,2.80e-09,24;UBERON:0009145,2.80e-09,24;UBERON:0000072,3.29e-08,27;UBERON:0004177,1.29e-07,29;UBERON:0005057,1.29e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,14.8491821957813,27.5945895417267,34.1734208430111,4.62288514208863,1.67521533890206,9.58724087614752,3.75907730401689,0,0.202475267389826,0,0,0.274228867211478,0.42438965179803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.4409111995798,4.6880120671428,0.523523743973798,20.5881020810855,2.04913645487534,1.45653105909346,0,0,0,0,0,0,0,0,0,0.167782606057736,3.62681071005672,4.7053131879945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359445373517761,0,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0.481059208201647,0.233753804363138,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:8068242..8068258,+ | |||
}} |
Revision as of 15:23, 13 September 2013
Short description: | p@chr17:8068242..8068258, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:8068242..8068258, + |
Coexpression cluster: | MCL_coexpression_mm9:233 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.76e-10 | 46 |
thymus | 1.07e-09 | 23 |
neck | 1.07e-09 | 23 |
respiratory system epithelium | 1.07e-09 | 23 |
hemolymphoid system gland | 1.07e-09 | 23 |
pharyngeal epithelium | 1.07e-09 | 23 |
thymic region | 1.07e-09 | 23 |
pharyngeal gland | 1.07e-09 | 23 |
entire pharyngeal arch endoderm | 1.07e-09 | 23 |
thymus primordium | 1.07e-09 | 23 |
early pharyngeal endoderm | 1.07e-09 | 23 |
pharynx | 2.80e-09 | 24 |
gland of gut | 2.80e-09 | 24 |
upper respiratory tract | 2.80e-09 | 24 |
chordate pharynx | 2.80e-09 | 24 |
pharyngeal arch system | 2.80e-09 | 24 |
pharyngeal region of foregut | 2.80e-09 | 24 |
segment of respiratory tract | 3.29e-08 | 27 |
hemopoietic organ | 1.29e-07 | 29 |
immune organ | 1.29e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.97e-09 | 3 |
muscle cancer | 1.97e-09 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.