FFCP PHASE1:Mm9::chr17:37407159..37407194,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14991|HGNC=|MCL_coexpression_id=404|UniProt=Q31093|association_with_transcript=0bp_to_ENSMUST00000038580,NM_013819,uc008cmo.1_5end|description=CAGE_peak_1_at_H2-M3_5end|id=chr17:37407159..37407194,+|ontology_enrichment_celltype=CL:0002320!1.69e-13!46;CL:0000134!1.69e-13!46;CL:0000219!1.88e-12!54;CL:0000988!1.24e-11!32;CL:0002032!1.24e-11!32;CL:0000037!1.24e-11!32;CL:0000566!1.24e-11!32;CL:0000837!1.24e-11!32;CL:0000063!5.96e-11!66;CL:0000738!1.68e-09!17;CL:0002087!1.68e-09!17;CL:0002031!5.56e-09!25;CL:0000838!6.10e-08!12;CL:0000542!2.62e-07!13;CL:0000051!2.62e-07!13;CL:0000084!2.80e-07!11;CL:0000827!2.80e-07!11|ontology_enrichment_celltype_v019_2=CL:0002320,1.67e-14,46;CL:0000134,1.67e-14,46;CL:0000219,2.54e-13,54;CL:0000988,9.84e-13,32;CL:0002032,9.84e-13,32;CL:0000037,9.84e-13,32;CL:0000837,9.84e-13,32;CL:0002031,5.61e-10,25;CL:0000738,9.51e-10,17;CL:0002087,9.51e-10,17;CL:0000838,3.86e-08,12;CL:0000542,1.74e-07,13;CL:0000051,1.74e-07,13;CL:0000084,1.86e-07,11;CL:0000827,1.86e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.13e-17!48;UBERON:0002390!1.80e-15!45;UBERON:0003061!1.80e-15!45;UBERON:0002384!1.69e-13!46;UBERON:0002405!2.04e-13!70;UBERON:0002371!4.59e-10!16;UBERON:0002204!1.42e-09!32;UBERON:0003081!8.73e-09!88;UBERON:0001474!1.96e-07!22;UBERON:0004765!1.96e-07!22;UBERON:0001434!1.96e-07!22;UBERON:0004177!3.70e-07!29;UBERON:0004119!4.41e-07!130;UBERON:0000925!4.41e-07!130;UBERON:0006595!4.41e-07!130;UBERON:0001007!7.93e-07!128;UBERON:0001555!7.93e-07!128;UBERON:0007026!7.93e-07!128|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.93e-18,48;UBERON:0002405,4.93e-18,48;UBERON:0002390,1.99e-16,45;UBERON:0003061,1.99e-16,45;UBERON:0002384,1.67e-14,46;UBERON:0002371,2.50e-10,16;UBERON:0002204,7.21e-10,32;UBERON:0003081,6.08e-09,87;UBERON:0000077,1.05e-08,35;UBERON:0004119,6.64e-08,118;UBERON:0000925,6.64e-08,118;UBERON:0006595,6.64e-08,118;UBERON:0004177,9.54e-08,29;UBERON:0005057,9.54e-08,29;UBERON:0001474,1.15e-07,22;UBERON:0004765,1.15e-07,22;UBERON:0001434,1.15e-07,22;UBERON:0001007,1.24e-07,116;UBERON:0001555,1.24e-07,116;UBERON:0007026,1.24e-07,116;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0004921,4.75e-07,114;UBERON:0003408,8.47e-07,24|phase1_expression=0.640595388419176,2.44282785347553,3.18499467572675,0.90739263392049,1.00179145989269,5.03637815735669,6.07392865548367,28.019761186822,12.67098499365,12.4054198950657,6.33506482434368,7.73789942254763,30.816131387617,29.8103572248781,10.9926221399169,11.1361397064404,3.49780939064073,44.7956274808698,47.3044795939799,39.0438479654188,5.18764069921526,10.3262589248921,16.7167865048919,6.39969691173627,10.3234176480227,4.59385571292016,1.7230479846363,4.52489588640367,6.84084310042946,7.05684363327806,7.76056787293567,0,0,0,5.48818077527422,5.31950865147176,4.28755648150975,7.95210098400125,8.5946887897618,9.94695113550217,7.64700934440319,4.78131839470912,6.311634589405,5.79125362687656,5.98123894195136,3.30384153891027,4.69434806608824,1.74420125104357,8.12838876117546,5.05517737593137,6.01941612989059,0,37.7510863629907,17.4086914082723,12.0993767691287,2.05807548828758,4.01146815914259,8.25075347643908,0.202316460859598,0,1.26766280701236,2.71075625655306,6.22506357277798,42.2952867122258,31.6437236021432,31.9716051725745,11.6844043102178,8.83702102239575,0.311068836925433,0.405017814995072,0.630974884054146,0.285650984403804,1.32521124570968,0.244981598429908,0.191690942036473,0,4.40463523997555,3.70293280447044,3.68655679814984,0.395658863190582,0.548925861614458,0,3.35019598801657,7.31591393041184,2.29197371665215,0,0.711858403995515,0.559198337475902,1.06016670666458,0.982430281388212,10.4351215932604,12.0459342777394,0.679971333707751,1.61910957491345,1.29955283489534,1.34408066129201,3.08977724289854,3.91989741929533,7.79358013808606,5.65343319216544,0.281686839553361,11.5493829672886,0,0,2.16491041011214,1.52015919285059,4.04419556011827,3.53970027129086,43.5015644527248,9.05497048295431,1.04091196059682,1.21786191324856,1.15307748628029,1.80867168663147,1.99900802130698,3.14166478324189,0.494389935468748,5.06097749219691,7.96149496754887,1.61766849947409,3.09178125844551,2.42437626567611,1.86391761218122,2.04946557908083,0.628340120440365,7.40825460104915,9.22576458695586,14.9975682748352,11.1821799824297,1.79748767285787,4.11750542536764,0.125654352112864,1.91206752211504,0.767146371990992,2.70124457927428,3.40706652442291,2.03678727700633,5.59831367745419,4.29628689337247,1.47309299120532,0,0.689706313300419,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.749613796477831,2.58703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,1.4404749548556,0.995171334092466,11.937624184325,11.0659600059328,13.3556844715929,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.46280133866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| ||
|EntrezGene=14991 | |||
|HGNC= | |||
|MCL_coexpression_id=404 | |||
|UniProt=Q31093 | |||
|association_with_transcript=0bp_to_ENSMUST00000038580,NM_013819,uc008cmo.1_5end | |||
|description=CAGE_peak_1_at_H2-M3_5end | |||
|id=chr17:37407159..37407194,+ | |||
|ontology_enrichment_celltype=CL:0002320!1.69e-13!46;CL:0000134!1.69e-13!46;CL:0000219!1.88e-12!54;CL:0000988!1.24e-11!32;CL:0002032!1.24e-11!32;CL:0000037!1.24e-11!32;CL:0000566!1.24e-11!32;CL:0000837!1.24e-11!32;CL:0000063!5.96e-11!66;CL:0000738!1.68e-09!17;CL:0002087!1.68e-09!17;CL:0002031!5.56e-09!25;CL:0000838!6.10e-08!12;CL:0000542!2.62e-07!13;CL:0000051!2.62e-07!13;CL:0000084!2.80e-07!11;CL:0000827!2.80e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.67e-14,46;CL:0000134,1.67e-14,46;CL:0000219,2.54e-13,54;CL:0000988,9.84e-13,32;CL:0002032,9.84e-13,32;CL:0000037,9.84e-13,32;CL:0000837,9.84e-13,32;CL:0002031,5.61e-10,25;CL:0000738,9.51e-10,17;CL:0002087,9.51e-10,17;CL:0000838,3.86e-08,12;CL:0000542,1.74e-07,13;CL:0000051,1.74e-07,13;CL:0000084,1.86e-07,11;CL:0000827,1.86e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.13e-17!48;UBERON:0002390!1.80e-15!45;UBERON:0003061!1.80e-15!45;UBERON:0002384!1.69e-13!46;UBERON:0002405!2.04e-13!70;UBERON:0002371!4.59e-10!16;UBERON:0002204!1.42e-09!32;UBERON:0003081!8.73e-09!88;UBERON:0001474!1.96e-07!22;UBERON:0004765!1.96e-07!22;UBERON:0001434!1.96e-07!22;UBERON:0004177!3.70e-07!29;UBERON:0004119!4.41e-07!130;UBERON:0000925!4.41e-07!130;UBERON:0006595!4.41e-07!130;UBERON:0001007!7.93e-07!128;UBERON:0001555!7.93e-07!128;UBERON:0007026!7.93e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.93e-18,48;UBERON:0002405,4.93e-18,48;UBERON:0002390,1.99e-16,45;UBERON:0003061,1.99e-16,45;UBERON:0002384,1.67e-14,46;UBERON:0002371,2.50e-10,16;UBERON:0002204,7.21e-10,32;UBERON:0003081,6.08e-09,87;UBERON:0000077,1.05e-08,35;UBERON:0004119,6.64e-08,118;UBERON:0000925,6.64e-08,118;UBERON:0006595,6.64e-08,118;UBERON:0004177,9.54e-08,29;UBERON:0005057,9.54e-08,29;UBERON:0001474,1.15e-07,22;UBERON:0004765,1.15e-07,22;UBERON:0001434,1.15e-07,22;UBERON:0001007,1.24e-07,116;UBERON:0001555,1.24e-07,116;UBERON:0007026,1.24e-07,116;UBERON:0000926,1.81e-07,120;UBERON:0004120,1.81e-07,120;UBERON:0006603,1.81e-07,120;UBERON:0004921,4.75e-07,114;UBERON:0003408,8.47e-07,24 | |||
|phase1_expression=0.640595388419176,2.44282785347553,3.18499467572675,0.90739263392049,1.00179145989269,5.03637815735669,6.07392865548367,28.019761186822,12.67098499365,12.4054198950657,6.33506482434368,7.73789942254763,30.816131387617,29.8103572248781,10.9926221399169,11.1361397064404,3.49780939064073,44.7956274808698,47.3044795939799,39.0438479654188,5.18764069921526,10.3262589248921,16.7167865048919,6.39969691173627,10.3234176480227,4.59385571292016,1.7230479846363,4.52489588640367,6.84084310042946,7.05684363327806,7.76056787293567,0,0,0,5.48818077527422,5.31950865147176,4.28755648150975,7.95210098400125,8.5946887897618,9.94695113550217,7.64700934440319,4.78131839470912,6.311634589405,5.79125362687656,5.98123894195136,3.30384153891027,4.69434806608824,1.74420125104357,8.12838876117546,5.05517737593137,6.01941612989059,0,37.7510863629907,17.4086914082723,12.0993767691287,2.05807548828758,4.01146815914259,8.25075347643908,0.202316460859598,0,1.26766280701236,2.71075625655306,6.22506357277798,42.2952867122258,31.6437236021432,31.9716051725745,11.6844043102178,8.83702102239575,0.311068836925433,0.405017814995072,0.630974884054146,0.285650984403804,1.32521124570968,0.244981598429908,0.191690942036473,0,4.40463523997555,3.70293280447044,3.68655679814984,0.395658863190582,0.548925861614458,0,3.35019598801657,7.31591393041184,2.29197371665215,0,0.711858403995515,0.559198337475902,1.06016670666458,0.982430281388212,10.4351215932604,12.0459342777394,0.679971333707751,1.61910957491345,1.29955283489534,1.34408066129201,3.08977724289854,3.91989741929533,7.79358013808606,5.65343319216544,0.281686839553361,11.5493829672886,0,0,2.16491041011214,1.52015919285059,4.04419556011827,3.53970027129086,43.5015644527248,9.05497048295431,1.04091196059682,1.21786191324856,1.15307748628029,1.80867168663147,1.99900802130698,3.14166478324189,0.494389935468748,5.06097749219691,7.96149496754887,1.61766849947409,3.09178125844551,2.42437626567611,1.86391761218122,2.04946557908083,0.628340120440365,7.40825460104915,9.22576458695586,14.9975682748352,11.1821799824297,1.79748767285787,4.11750542536764,0.125654352112864,1.91206752211504,0.767146371990992,2.70124457927428,3.40706652442291,2.03678727700633,5.59831367745419,4.29628689337247,1.47309299120532,0,0.689706313300419,0.360124259610698,0.150704817835715,0.340182495756639,0.512454881139399,0.749613796477831,2.58703370739016,0.215567992932842,0.567318240503458,0.527853372491847,0.657587197282725,0.556094498451196,0.348252166522167,1.4404749548556,0.995171334092466,11.937624184325,11.0659600059328,13.3556844715929,0.207125772535502,0.469052119962192,0.36012412292203,0.23674473558521,0.787056926989615,0.462801338662135,0.465067889500816,0.804820204198858,1.05088808130453,1.15191894939436,2.29834449710733,2.59420190546738,3.21639972335731,5.92785311285837,5.50246316917524,0.841159794256509,0.514523061896422,2.97376904685418,2.90895623329899,1.49301775374664,0.696710015581316,1.9330119198314,1.4117846723634,1.77902435075896,1.33157938278791,3.79623249235609,2.63518327558417,4.27269854960458,3.78017296878187,2.53453313254856,3.59527763461689,3.8904848977445,4.38110801159608,0.758671603812327,0.799739588268102,0,0.814605311381257,0.775809948670503,1.1221731182451,0.948548056863859,1.62371162777562,1.41298855057237,1.72756029490521,4.15033677922008,0.667380422864376,1.17935397067922,0.224862112384854,0.811440485554012,1.20588579876208,0.50925170356284,1.43848068725405,5.99900339067631,3.0201755450689,2.87536413054709,6.69853705803306,3.74445207737473,5.80931419278357,4.4849353380478,1.92977408545347,14.4107488329952,0.37898282354097,0.488894929326078,0.169745085775188,0.469380496577004,1.00503754465089,1.90434912708811,1.75620283072019,2.20689201748667,6.2010113101657,3.6674596791222,12.1258852889646,9.84304396635605,8.24499633914616,31.6661696272472,22.8440387203858,5.4094070032094,5.51873492609465,3.21101179975584,3.28192722458169,3.93443868904021,4.03953483526997,1.57754109708128,1.17131623288992,0.861693590931196,0.716906393857656,0.891194696329576,0.283076530788832,0.809621403349789,1.75353514746787,0.790575555893047,2.57057053137446,5.81954349353901,0.178065603667255,1.62886959353576,5.60898418106621,3.98235415019888,0.485561272309963,1.51161778482376,0.943025398779491,1.77181135728464,1.22974059177571,4.13485269069154,2.90826983582004,2.49548164869305,3.79244109522979,2.10837217149998,0,11.5749465956288,0.540183282093931,1.29358683782755,0.857348140126369,1.77340233642274,2.31879462882692,3.1264313914403,3.65357938937519,3.05073220482823,5.2958017715955,5.51320995137405,3.2977250588296,1.29171541356724,0.904693873922338,0.358117032009409,0.820704498725306,4.95517422270746,3.33765543618917,14.0114122254239,1.857481811669,2.40752885580625,4.52084296811258,12.8492574057764,8.69357058184786,14.4481665494777,13.1554365184239,15.340197092291,2.86401185404534,0.949007980743406,0.813277868507395,1.18805874903981,1.67270636811575,1.52853794622324,2.69728692769641,3.47144514046411,3.40282724579238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| |||
|short_description=p1@H2-M3 | |||
}} |
Revision as of 14:31, 13 September 2013
Short description: | p1@H2-M3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_H2-M3_5end |
Coexpression cluster: | MCL_coexpression_mm9:404 |
Association with transcript: | 0bp_to_ENSMUST00000038580, NM_013819, uc008cmo.1_5end |
EntrezGene: | H2-M3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.67e-14 | 46 |
mesenchymal cell | 1.67e-14 | 46 |
motile cell | 2.54e-13 | 54 |
hematopoietic cell | 9.84e-13 | 32 |
hematopoietic oligopotent progenitor cell | 9.84e-13 | 32 |
hematopoietic stem cell | 9.84e-13 | 32 |
hematopoietic multipotent progenitor cell | 9.84e-13 | 32 |
hematopoietic lineage restricted progenitor cell | 5.61e-10 | 25 |
leukocyte | 9.51e-10 | 17 |
nongranular leukocyte | 9.51e-10 | 17 |
lymphoid lineage restricted progenitor cell | 3.86e-08 | 12 |
lymphocyte | 1.74e-07 | 13 |
common lymphoid progenitor | 1.74e-07 | 13 |
T cell | 1.86e-07 | 11 |
pro-T cell | 1.86e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.93e-18 | 48 |
immune system | 4.93e-18 | 48 |
hematopoietic system | 1.99e-16 | 45 |
blood island | 1.99e-16 | 45 |
connective tissue | 1.67e-14 | 46 |
bone marrow | 2.50e-10 | 16 |
musculoskeletal system | 7.21e-10 | 32 |
lateral plate mesoderm | 6.08e-09 | 87 |
mixed endoderm/mesoderm-derived structure | 1.05e-08 | 35 |
endoderm-derived structure | 6.64e-08 | 118 |
endoderm | 6.64e-08 | 118 |
presumptive endoderm | 6.64e-08 | 118 |
hemopoietic organ | 9.54e-08 | 29 |
immune organ | 9.54e-08 | 29 |
bone element | 1.15e-07 | 22 |
skeletal element | 1.15e-07 | 22 |
skeletal system | 1.15e-07 | 22 |
digestive system | 1.24e-07 | 116 |
digestive tract | 1.24e-07 | 116 |
primitive gut | 1.24e-07 | 116 |
mesoderm | 1.81e-07 | 120 |
mesoderm-derived structure | 1.81e-07 | 120 |
presumptive mesoderm | 1.81e-07 | 120 |
subdivision of digestive tract | 4.75e-07 | 114 |
gland of gut | 8.47e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.