FFCP PHASE1:Mm9::chr11:102331153..102331180,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16399|HGNC=|MCL_coexpression_id=64|UniProt=Q9QUM0|association_with_transcript=16bp_to_ENSMUST00000103086,NM_010575,uc007lrx.2,uc007lry.2_5end|description=CAGE_peak_2_at_Itga2b_5end|id=chr11:102331153..102331180,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000049,1.42e-12,19;CL:0000764,7.67e-11,3;CL:0000765,7.67e-11,3;CL:0000038,7.67e-11,3;CL:0000547,7.67e-11,3;CL:0000988,2.55e-08,32;CL:0002032,2.55e-08,32;CL:0000037,2.55e-08,32;CL:0000837,2.55e-08,32;CL:0000763,8.20e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:2531,7.67e-11,3;DOID:0060083,7.67e-11,3;DOID:1240,7.67e-11,3|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-07,6;UBERON:0004457,1.71e-07,6;UBERON:0000042,1.71e-07,6;UBERON:0004854,1.71e-07,6;UBERON:0009034,1.71e-07,6;UBERON:0002095,1.71e-07,6;UBERON:0004782,1.71e-07,6;UBERON:0003281,1.71e-07,6;UBERON:0009664,1.71e-07,6;UBERON:0002296,1.71e-07,6;UBERON:0005602,1.71e-07,6;UBERON:0001179,1.71e-07,6;UBERON:0006293,1.71e-07,6|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.473193248037357,0,0,0,0.794327609607082,1.30599894569468,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,14.6057054895715,11.6862309641068,63.3926724061755,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,0,0,3.5384422077995,0,2.42925670306433,0.484875253135222,0,0,0,0,12.5805880731216,10.7982491578813,14.2318654321832,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0.61734640922383,0.199034266818493,7.72434506044558,10.5512641917033,7.10408748488982,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.667380422864376,2.75182593158484,0.899448449539415,1.21716072833102,0.964708639009667,1.52775511068852,0.863088412352432,1.94562272130042,1.09824565275233,0,0.372140947668503,0.624075346229121,0,0,0,0.369506380333209,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0.807322133479528,0,0.119372344003136,0.164140899745061,0,0,1.02522528478712,1.03193433981611,0.740778109478847,1.69531611304222,0.136694227721025,1.14389086603261,12.4084253895514,12.8755336137765,11.3323978519628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89265731986558,2.97861775777999,2.07873316764472,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0,0,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.73171189149109,0,0,1.12228454331548,0.474540072496697,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.695603506861264|short_description=p2@Itga2b}} | ||
|EntrezGene=16399 | |||
|HGNC= | |||
|MCL_coexpression_id=64 | |||
|UniProt=Q9QUM0 | |||
|association_with_transcript=16bp_to_ENSMUST00000103086,NM_010575,uc007lrx.2,uc007lry.2_5end | |||
|description=CAGE_peak_2_at_Itga2b_5end | |||
|id=chr11:102331153..102331180,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.42e-12,19;CL:0000764,7.67e-11,3;CL:0000765,7.67e-11,3;CL:0000038,7.67e-11,3;CL:0000547,7.67e-11,3;CL:0000988,2.55e-08,32;CL:0002032,2.55e-08,32;CL:0000037,2.55e-08,32;CL:0000837,2.55e-08,32;CL:0000763,8.20e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,7.67e-11,3;DOID:0060083,7.67e-11,3;DOID:1240,7.67e-11,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.71e-07,6;UBERON:0004457,1.71e-07,6;UBERON:0000042,1.71e-07,6;UBERON:0004854,1.71e-07,6;UBERON:0009034,1.71e-07,6;UBERON:0002095,1.71e-07,6;UBERON:0004782,1.71e-07,6;UBERON:0003281,1.71e-07,6;UBERON:0009664,1.71e-07,6;UBERON:0002296,1.71e-07,6;UBERON:0005602,1.71e-07,6;UBERON:0001179,1.71e-07,6;UBERON:0006293,1.71e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0.473193248037357,0,0,0,0.794327609607082,1.30599894569468,0.47997726838022,0.22940928106717,0,0,0,0.190023419456374,0,0,14.6057054895715,11.6862309641068,63.3926724061755,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,1.55362730188303,0,0.520455980298408,0,0,0.150722640552623,0.23517741427141,0,0,0,3.5384422077995,0,2.42925670306433,0.484875253135222,0,0,0,0,12.5805880731216,10.7982491578813,14.2318654321832,0,0,0,0,0,0,0,0.203678727700633,1.49288364732112,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0,0,0.215567992932842,0,0.175951124163949,0,0,0,0.61734640922383,0.199034266818493,7.72434506044558,10.5512641917033,7.10408748488982,0.414251545071004,0.234526059981096,0.36012412292203,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0.19496408711912,0,0,0,0.189667900953082,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0.667380422864376,2.75182593158484,0.899448449539415,1.21716072833102,0.964708639009667,1.52775511068852,0.863088412352432,1.94562272130042,1.09824565275233,0,0.372140947668503,0.624075346229121,0,0,0,0.369506380333209,0.37898282354097,0,0.169745085775188,0.234690248288502,0,0.476087281772027,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.488660878060728,0,0,0.242780636154981,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0.21183207086382,0.220528398054962,0,0.807322133479528,0,0.119372344003136,0.164140899745061,0,0,1.02522528478712,1.03193433981611,0.740778109478847,1.69531611304222,0.136694227721025,1.14389086603261,12.4084253895514,12.8755336137765,11.3323978519628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.89265731986558,2.97861775777999,2.07873316764472,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0.44449345560323,0.206035057238894,0,0,0,0.188626341386076,0,0,0.287177344778066,0.476293691283074,0.115884325944855,0.38581844092741,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.376437521661322,0.169229215783353,0.73171189149109,0,0,1.12228454331548,0.474540072496697,0.29551344712669,0,0.154936841185966,0,0,0.233931608445408,0.214871054048298,0,0.220591419119515,0.695603506861264 | |||
|short_description=p2@Itga2b | |||
}} |
Revision as of 18:21, 12 September 2013
Short description: | p2@Itga2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Itga2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 16bp_to_ENSMUST00000103086, NM_010575, uc007lrx.2, uc007lry.2_5end |
EntrezGene: | Itga2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.42e-12 | 19 |
erythroid lineage cell | 7.67e-11 | 3 |
erythroblast | 7.67e-11 | 3 |
erythroid progenitor cell | 7.67e-11 | 3 |
proerythroblast | 7.67e-11 | 3 |
hematopoietic cell | 2.55e-08 | 32 |
hematopoietic oligopotent progenitor cell | 2.55e-08 | 32 |
hematopoietic stem cell | 2.55e-08 | 32 |
hematopoietic multipotent progenitor cell | 2.55e-08 | 32 |
myeloid cell | 8.20e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.71e-07 | 6 |
cavity lining | 1.71e-07 | 6 |
serous membrane | 1.71e-07 | 6 |
gastrointestinal system mesentery | 1.71e-07 | 6 |
stomach region | 1.71e-07 | 6 |
mesentery | 1.71e-07 | 6 |
gastrointestinal system serosa | 1.71e-07 | 6 |
mesentery of stomach | 1.71e-07 | 6 |
gut mesentery | 1.71e-07 | 6 |
dorsal mesentery | 1.71e-07 | 6 |
dorsal mesogastrium | 1.71e-07 | 6 |
peritoneal cavity | 1.71e-07 | 6 |
spleen primordium | 1.71e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 7.67e-11 | 3 |
immune system cancer | 7.67e-11 | 3 |
leukemia | 7.67e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.