FFCP PHASE1:Mm9::chr6:39370280..39370328,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54484|HGNC=|MCL_coexpression_id=0|UniProt=Q9QXP6|association_with_transcript=0bp_to_ENSMUST00000114822_5end|description=CAGE_peak_2_at_Mkrn1_5end|id=chr6:39370280..39370328,-|ontology_enrichment_celltype=CL:0000117!3.99e-08!23;CL:0000337!3.99e-08!23;CL:0000144!8.92e-07!121;CL:0000012!8.92e-07!121|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-08,23;CL:0000337,3.99e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.86e-09!15;UBERON:0004923!7.95e-09!24;UBERON:0001242!4.77e-08!13;UBERON:0000060!4.77e-08!13;UBERON:0001262!4.77e-08!13;UBERON:0004786!4.77e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.86e-09,15;UBERON:0004923,7.95e-09,24;UBERON:0001242,4.77e-08,13;UBERON:0001262,4.77e-08,13;UBERON:0004786,4.77e-08,13|phase1_expression=27.8658993962341,102.249794438333,127.39978702907,97.3934760407993,108.193477668411,51.2031779331264,42.7511132289812,32.0225842135109,15.3459707145317,8.66038747391376,21.7446819646391,15.3960266860999,30.816131387617,36.8039894183979,44.9698178451145,39.4826771410161,34.9780939064073,28.2338637995623,25.6403990842732,28.434106670468,89.2954546586233,21.645427361793,19.3287843962812,50.0776283343363,58.040548109994,106.807145325394,89.5984952010876,77.3541725342342,104.322857281549,115.429799430048,70.5103023883869,16.5107975099504,14.7615549020297,31.6963362030877,32.9290846516453,33.413163717057,37.1588228397512,94.5881485465411,85.1655525530942,71.1992291804366,85.8817972525281,95.6263678941824,83.0222703683273,15.6112054289716,14.9024088892686,12.2976323948327,9.38869613217647,13.5175596955877,10.9843091367236,12.0546537426056,16.2384249085421,21.5628846547457,25.8385213328914,44.9724528047034,34.9537551108163,20.5807548828758,18.6246735960192,24.2365883370398,69.394546074842,67.1818543675482,59.5801519295808,14.2314703469035,16.8966011261116,49.9444343091176,53.3987835786166,53.9964887359036,16.1784059679939,14.9845139075406,50.8079100311541,63.9928147692214,58.890989178387,31.992910253226,33.3511496836936,60.1429824145424,66.4209114156378,57.9107835564313,26.4278114398533,20.42997409363,23.1945865216928,55.5241271344116,58.0946536875301,60.4259509845842,27.3599339021353,24.1987922313622,25.6701056265041,33.8822873294718,27.1929910326287,50.3278503728312,23.1722151599543,20.5554643490457,18.5513272769074,10.3250865237766,28.5587960157255,22.6675340487883,18.1937396885347,19.7131830322828,26.8248842451646,18.5769051610083,20.7828803682295,25.4404493647445,24.6475984609191,14.115912515575,12.7402619853323,14.2213340630666,19.2677026499981,21.2822286999083,19.2099289105618,36.9955770289754,19.1614033898907,21.8209944425292,13.0113995074602,23.1393763517227,24.6758582063983,24.4170677695249,26.9278139340764,22.7456530306713,23.4835219347655,14.0261376212314,58.3842964286917,14.0737159454246,26.7218237337076,21.819386391085,29.8226817948995,21.0802173848314,31.8358994356452,54.41235275943,43.1334448221313,44.3928020935122,47.0159840170339,19.472783122627,23.7900313465686,41.2146274930195,21.7280400240346,24.5486839037117,18.7009240103604,20.1179166204019,18.025567401506,30.6041147700829,43.9737599674594,19.3606507415556,14.4433691688601,23.6799167566477,19.6267721487831,21.701493768343,31.0246436130055,29.9786105466548,34.2948311888607,30.0095910057258,10.1316956678436,6.80781888604149,9.50136070485324,10.0830036916684,12.2340789659263,12.537077994798,16.4625709126355,16.1217756122979,37.9195121149147,33.9699237391424,40.3512169141742,11.3919174894526,13.3679854189225,12.064158117888,11.6004920436753,12.9864392953287,15.4267112887378,15.5797742982773,15.5598572811779,23.7033645005354,16.1268652915211,21.8342727225197,17.9162069096341,22.0761981012252,24.8091630278887,27.9149351021573,18.5055154736432,35.810805107991,96.1518658482852,34.9074747995878,10.024547775156,10.4506502337197,12.7578786708872,15.327947871374,15.5664630691409,21.6857213768317,51.7236677083518,24.5401442538776,33.9302531880364,24.6706025331027,31.1942539390592,42.2445122067484,51.2247178203025,70.2968694587916,9.86273084956025,13.3670759753383,7.88954149711563,13.0336849821001,17.8436288194216,22.233054905231,18.5915419145316,18.5988786454299,18.0548537017581,25.0496242761255,8.59712618552732,16.6845105716094,21.2283714722259,26.9834534861824,26.7775360232824,23.8765388154893,33.355986583366,20.4264257590076,30.3192874069316,21.4157902286704,14.3768206527355,13.0249331683976,16.8500343481863,14.6495749209325,14.5311904952749,19.2977408545347,27.8977317151573,11.9379589415405,7.49638891633319,8.65699937453459,12.9079636558676,15.410575684647,17.615229425565,31.4165173051056,21.1231093102296,27.9045508957456,19.7723913135284,30.9701664812745,29.5291318990681,38.0427024069375,70.871903451458,44.0563603893155,14.7529281905711,20.4193192265502,21.9954308283275,22.0357970793342,9.50822683184717,14.6433137778536,14.8288863125641,16.7888660047555,20.6806461823487,16.7278158566786,19.8290819933331,18.6830510320629,16.1924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| ||
|EntrezGene=54484 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|UniProt=Q9QXP6 | |||
|association_with_transcript=0bp_to_ENSMUST00000114822_5end | |||
|description=CAGE_peak_2_at_Mkrn1_5end | |||
|id=chr6:39370280..39370328,- | |||
|ontology_enrichment_celltype=CL:0000117!3.99e-08!23;CL:0000337!3.99e-08!23;CL:0000144!8.92e-07!121;CL:0000012!8.92e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.99e-08,23;CL:0000337,3.99e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.86e-09!15;UBERON:0004923!7.95e-09!24;UBERON:0001242!4.77e-08!13;UBERON:0000060!4.77e-08!13;UBERON:0001262!4.77e-08!13;UBERON:0004786!4.77e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.86e-09,15;UBERON:0004923,7.95e-09,24;UBERON:0001242,4.77e-08,13;UBERON:0001262,4.77e-08,13;UBERON:0004786,4.77e-08,13 | |||
|phase1_expression=27.8658993962341,102.249794438333,127.39978702907,97.3934760407993,108.193477668411,51.2031779331264,42.7511132289812,32.0225842135109,15.3459707145317,8.66038747391376,21.7446819646391,15.3960266860999,30.816131387617,36.8039894183979,44.9698178451145,39.4826771410161,34.9780939064073,28.2338637995623,25.6403990842732,28.434106670468,89.2954546586233,21.645427361793,19.3287843962812,50.0776283343363,58.040548109994,106.807145325394,89.5984952010876,77.3541725342342,104.322857281549,115.429799430048,70.5103023883869,16.5107975099504,14.7615549020297,31.6963362030877,32.9290846516453,33.413163717057,37.1588228397512,94.5881485465411,85.1655525530942,71.1992291804366,85.8817972525281,95.6263678941824,83.0222703683273,15.6112054289716,14.9024088892686,12.2976323948327,9.38869613217647,13.5175596955877,10.9843091367236,12.0546537426056,16.2384249085421,21.5628846547457,25.8385213328914,44.9724528047034,34.9537551108163,20.5807548828758,18.6246735960192,24.2365883370398,69.394546074842,67.1818543675482,59.5801519295808,14.2314703469035,16.8966011261116,49.9444343091176,53.3987835786166,53.9964887359036,16.1784059679939,14.9845139075406,50.8079100311541,63.9928147692214,58.890989178387,31.992910253226,33.3511496836936,60.1429824145424,66.4209114156378,57.9107835564313,26.4278114398533,20.42997409363,23.1945865216928,55.5241271344116,58.0946536875301,60.4259509845842,27.3599339021353,24.1987922313622,25.6701056265041,33.8822873294718,27.1929910326287,50.3278503728312,23.1722151599543,20.5554643490457,18.5513272769074,10.3250865237766,28.5587960157255,22.6675340487883,18.1937396885347,19.7131830322828,26.8248842451646,18.5769051610083,20.7828803682295,25.4404493647445,24.6475984609191,14.115912515575,12.7402619853323,14.2213340630666,19.2677026499981,21.2822286999083,19.2099289105618,36.9955770289754,19.1614033898907,21.8209944425292,13.0113995074602,23.1393763517227,24.6758582063983,24.4170677695249,26.9278139340764,22.7456530306713,23.4835219347655,14.0261376212314,58.3842964286917,14.0737159454246,26.7218237337076,21.819386391085,29.8226817948995,21.0802173848314,31.8358994356452,54.41235275943,43.1334448221313,44.3928020935122,47.0159840170339,19.472783122627,23.7900313465686,41.2146274930195,21.7280400240346,24.5486839037117,18.7009240103604,20.1179166204019,18.025567401506,30.6041147700829,43.9737599674594,19.3606507415556,14.4433691688601,23.6799167566477,19.6267721487831,21.701493768343,31.0246436130055,29.9786105466548,34.2948311888607,30.0095910057258,10.1316956678436,6.80781888604149,9.50136070485324,10.0830036916684,12.2340789659263,12.537077994798,16.4625709126355,16.1217756122979,37.9195121149147,33.9699237391424,40.3512169141742,11.3919174894526,13.3679854189225,12.064158117888,11.6004920436753,12.9864392953287,15.4267112887378,15.5797742982773,15.5598572811779,23.7033645005354,16.1268652915211,21.8342727225197,17.9162069096341,22.0761981012252,24.8091630278887,27.9149351021573,18.5055154736432,35.810805107991,96.1518658482852,34.9074747995878,10.024547775156,10.4506502337197,12.7578786708872,15.327947871374,15.5664630691409,21.6857213768317,51.7236677083518,24.5401442538776,33.9302531880364,24.6706025331027,31.1942539390592,42.2445122067484,51.2247178203025,70.2968694587916,9.86273084956025,13.3670759753383,7.88954149711563,13.0336849821001,17.8436288194216,22.233054905231,18.5915419145316,18.5988786454299,18.0548537017581,25.0496242761255,8.59712618552732,16.6845105716094,21.2283714722259,26.9834534861824,26.7775360232824,23.8765388154893,33.355986583366,20.4264257590076,30.3192874069316,21.4157902286704,14.3768206527355,13.0249331683976,16.8500343481863,14.6495749209325,14.5311904952749,19.2977408545347,27.8977317151573,11.9379589415405,7.49638891633319,8.65699937453459,12.9079636558676,15.410575684647,17.615229425565,31.4165173051056,21.1231093102296,27.9045508957456,19.7723913135284,30.9701664812745,29.5291318990681,38.0427024069375,70.871903451458,44.0563603893155,14.7529281905711,20.4193192265502,21.9954308283275,22.0357970793342,9.50822683184717,14.6433137778536,14.8288863125641,16.7888660047555,20.6806461823487,16.7278158566786,19.8290819933331,18.6830510320629,16.1924280669958,18.1198631905013,20.5549644532192,32.1321316421807,22.0007132072816,15.6697731227185,17.5917916101862,20.4562952485944,9.2921596837974,13.595715624679,12.9999129494843,14.7111962209601,16.5369060013233,11.3751004739253,24.0338312646446,16.7225515559653,17.8248689192361,19.9103157499564,8.4334886859999,24.7525303795648,17.3624198934432,20.1668425315067,25.3543020214199,24.6487590286331,20.0394464015769,24.2581591938816,22.3786668018885,30.4464949114599,22.0591405579888,35.375955834258,14.7754026696824,18.6321465823872,26.1572371247367,16.7066802050992,23.8744688006273,22.1590214655833,43.1391638212179,21.5093350332191,29.3897914972307,18.9875918526165,20.3713980106683,40.3108497990039,33.7634742470932,41.4088493503806,46.4041113883225,42.545241506392,42.1509920103493,22.9120948323627,9.64824780422463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| |||
|short_description=p2@Mkrn1 | |||
}} | |||
Revision as of 09:47, 14 September 2013
| Short description: | p2@Mkrn1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Mkrn1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:0 |
| Association with transcript: | 0bp_to_ENSMUST00000114822_5end |
| EntrezGene: | Mkrn1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.99e-08 | 23 |
| neuroblast (sensu Vertebrata) | 3.99e-08 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 5.86e-09 | 15 |
| organ component layer | 7.95e-09 | 24 |
| intestinal mucosa | 4.77e-08 | 13 |
| wall of intestine | 4.77e-08 | 13 |
| gastrointestinal system mucosa | 4.77e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
