FFCP PHASE1:Mm9::chr15:79571783..79571791,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:79571783..79571791,-|id=chr15:79571783..79571791,-|ontology_enrichment_celltype=CL:0000838!1.11e-12!12;CL:0000542!1.22e-11!13;CL:0000051!1.22e-11!13;CL:0000084!2.07e-10!11;CL:0000827!2.07e-10!11;CL:0000624!3.20e-10!8;CL:0000791!4.66e-09!9;CL:0000789!4.66e-09!9;CL:0002420!4.66e-09!9;CL:0002419!4.66e-09!9;CL:0000790!4.66e-09!9;CL:0000893!7.21e-09!6;CL:0002489!7.21e-09!6;CL:0000898!7.21e-09!6;CL:0000809!7.21e-09!6;CL:0000810!7.21e-09!6;CL:0000895!7.21e-09!6;CL:0000808!7.21e-09!6;CL:0000894!7.21e-09!6;CL:0000806!7.21e-09!6;CL:0000807!7.21e-09!6;CL:0000805!7.21e-09!6;CL:0002425!7.21e-09!6;CL:0002436!7.21e-09!6;CL:0002427!7.21e-09!6;CL:0002428!7.21e-09!6;CL:0002429!7.21e-09!6;CL:0002433!7.21e-09!6;CL:0002431!7.21e-09!6;CL:0002432!7.21e-09!6;CL:0000738!1.07e-08!17;CL:0002087!1.07e-08!17;CL:0002031!3.26e-07!25;CL:0000988!7.45e-07!32;CL:0002032!7.45e-07!32;CL:0000037!7.45e-07!32;CL:0000566!7.45e-07!32;CL:0000837!7.45e-07!32|ontology_enrichment_celltype_v019_2=CL:0000355,3.30e-15,9|ontology_enrichment_disease=DOID:0060100!1.06e-11!3;DOID:4045!1.06e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-44,3;DOID:4045,8.97e-44,3;DOID:0050686,2.23e-22,6|ontology_enrichment_uberon=UBERON:0004177!9.96e-08!29;UBERON:0002390!8.66e-07!45;UBERON:0003061!8.66e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.30e-15,9;UBERON:0002036,3.30e-15,9;UBERON:0002385,3.30e-15,9;UBERON:0000486,3.30e-15,9;UBERON:0007503,3.30e-15,9;UBERON:0001015,3.30e-15,9;UBERON:0002329,3.30e-15,9;UBERON:0003082,3.30e-15,9;UBERON:0003059,3.30e-15,9;UBERON:0007282,3.30e-15,9;UBERON:0004290,3.30e-15,9;UBERON:0009618,3.30e-15,9;UBERON:0000383,9.08e-14,10;UBERON:0007524,1.37e-12,11;UBERON:0003077,1.37e-12,11;UBERON:0007285,1.37e-12,11|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,7.0320181007142,4.71171369576418,41.764435650202,8.19654581950135,5.82612423637384,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr15:79571783..79571791,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:79571783..79571791,- | |||
|id=chr15:79571783..79571791,- | |||
|ontology_enrichment_celltype=CL:0000838!1.11e-12!12;CL:0000542!1.22e-11!13;CL:0000051!1.22e-11!13;CL:0000084!2.07e-10!11;CL:0000827!2.07e-10!11;CL:0000624!3.20e-10!8;CL:0000791!4.66e-09!9;CL:0000789!4.66e-09!9;CL:0002420!4.66e-09!9;CL:0002419!4.66e-09!9;CL:0000790!4.66e-09!9;CL:0000893!7.21e-09!6;CL:0002489!7.21e-09!6;CL:0000898!7.21e-09!6;CL:0000809!7.21e-09!6;CL:0000810!7.21e-09!6;CL:0000895!7.21e-09!6;CL:0000808!7.21e-09!6;CL:0000894!7.21e-09!6;CL:0000806!7.21e-09!6;CL:0000807!7.21e-09!6;CL:0000805!7.21e-09!6;CL:0002425!7.21e-09!6;CL:0002436!7.21e-09!6;CL:0002427!7.21e-09!6;CL:0002428!7.21e-09!6;CL:0002429!7.21e-09!6;CL:0002433!7.21e-09!6;CL:0002431!7.21e-09!6;CL:0002432!7.21e-09!6;CL:0000738!1.07e-08!17;CL:0002087!1.07e-08!17;CL:0002031!3.26e-07!25;CL:0000988!7.45e-07!32;CL:0002032!7.45e-07!32;CL:0000037!7.45e-07!32;CL:0000566!7.45e-07!32;CL:0000837!7.45e-07!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,3.30e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.06e-11!3;DOID:4045!1.06e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.97e-44,3;DOID:4045,8.97e-44,3;DOID:0050686,2.23e-22,6 | |||
|ontology_enrichment_uberon=UBERON:0004177!9.96e-08!29;UBERON:0002390!8.66e-07!45;UBERON:0003061!8.66e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,3.30e-15,9;UBERON:0002036,3.30e-15,9;UBERON:0002385,3.30e-15,9;UBERON:0000486,3.30e-15,9;UBERON:0007503,3.30e-15,9;UBERON:0001015,3.30e-15,9;UBERON:0002329,3.30e-15,9;UBERON:0003082,3.30e-15,9;UBERON:0003059,3.30e-15,9;UBERON:0007282,3.30e-15,9;UBERON:0004290,3.30e-15,9;UBERON:0009618,3.30e-15,9;UBERON:0000383,9.08e-14,10;UBERON:0007524,1.37e-12,11;UBERON:0003077,1.37e-12,11;UBERON:0007285,1.37e-12,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.140788722151667,0.234064526321993,0,0,0.171200729931206,0.34968160967599,0,0,0,0,0.137114433605739,0,0,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.20769587621197,7.0320181007142,4.71171369576418,41.764435650202,8.19654581950135,5.82612423637384,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16488625294148,0,0,0.238744688006273,0,0,0,0.341741761595705,0.206386867963223,0.185194527369712,0,0,0,0,0.559805809294632,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr15:79571783..79571791,- | |||
}} |
Revision as of 11:11, 13 September 2013
Short description: | p@chr15:79571783..79571791, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:79571783..79571791, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 3.30e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 3.30e-15 | 9 |
striated muscle tissue | 3.30e-15 | 9 |
muscle tissue | 3.30e-15 | 9 |
multilaminar epithelium | 3.30e-15 | 9 |
epithelial vesicle | 3.30e-15 | 9 |
musculature | 3.30e-15 | 9 |
somite | 3.30e-15 | 9 |
myotome | 3.30e-15 | 9 |
presomitic mesoderm | 3.30e-15 | 9 |
presumptive segmental plate | 3.30e-15 | 9 |
dermomyotome | 3.30e-15 | 9 |
trunk paraxial mesoderm | 3.30e-15 | 9 |
musculature of body | 9.08e-14 | 10 |
dense mesenchyme tissue | 1.37e-12 | 11 |
paraxial mesoderm | 1.37e-12 | 11 |
presumptive paraxial mesoderm | 1.37e-12 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.97e-44 | 3 |
muscle cancer | 8.97e-44 | 3 |
organ system cancer | 2.23e-22 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.