FFCP PHASE1:Mm9::chr2:112108160..112108174,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=522|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:112108160..112108174,-|id=chr2:112108160..112108174,-|ontology_enrichment_celltype=CL:0000988!4.75e-15!32;CL:0002032!4.75e-15!32;CL:0000037!4.75e-15!32;CL:0000566!4.75e-15!32;CL:0000837!4.75e-15!32;CL:0000049!1.38e-10!19;CL:0002320!4.97e-09!46;CL:0000134!4.97e-09!46;CL:0002031!6.44e-08!25;CL:0000219!4.94e-07!54|ontology_enrichment_celltype_v019_2=CL:0000049,1.39e-15,19;CL:0000988,2.42e-11,32;CL:0002032,2.42e-11,32;CL:0000037,2.42e-11,32;CL:0000837,2.42e-11,32;CL:0000034,2.66e-09,97;CL:0002320,1.59e-07,46;CL:0000134,1.59e-07,46;CL:0000763,1.88e-07,16;CL:0000557,5.60e-07,7|ontology_enrichment_disease=DOID:0060100!4.73e-07!3;DOID:4045!4.73e-07!3|ontology_enrichment_disease_v019_2=DOID:0060100,8.21e-16,3;DOID:4045,8.21e-16,3;DOID:0050686,3.66e-08,6|ontology_enrichment_uberon=UBERON:0002193!1.82e-13!48;UBERON:0002390!6.29e-12!45;UBERON:0003061!6.29e-12!45;UBERON:0002384!4.97e-09!46;UBERON:0002405!2.53e-08!70|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.61e-09,32;UBERON:0002384,1.59e-07,46;UBERON:0002371,1.88e-07,16|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0.478632953972018,0.171200729931206,0.0874204024189974,0,0.607425802169478,0,0.788655413395594,1.64537320326887,1.27316895539409,0,0.595745707205312,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,3.14114246384279,4.1176204162171,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,2.75574786363617,4.79922184794726,2.28726408731516,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.83082697826187,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0,0.686334519619568,2.37969801991397,2.79902904647316,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p@chr2:112108160..112108174,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=522 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr2:112108160..112108174,- | |||
|id=chr2:112108160..112108174,- | |||
|ontology_enrichment_celltype=CL:0000988!4.75e-15!32;CL:0002032!4.75e-15!32;CL:0000037!4.75e-15!32;CL:0000566!4.75e-15!32;CL:0000837!4.75e-15!32;CL:0000049!1.38e-10!19;CL:0002320!4.97e-09!46;CL:0000134!4.97e-09!46;CL:0002031!6.44e-08!25;CL:0000219!4.94e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,1.39e-15,19;CL:0000988,2.42e-11,32;CL:0002032,2.42e-11,32;CL:0000037,2.42e-11,32;CL:0000837,2.42e-11,32;CL:0000034,2.66e-09,97;CL:0002320,1.59e-07,46;CL:0000134,1.59e-07,46;CL:0000763,1.88e-07,16;CL:0000557,5.60e-07,7 | |||
|ontology_enrichment_disease=DOID:0060100!4.73e-07!3;DOID:4045!4.73e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.21e-16,3;DOID:4045,8.21e-16,3;DOID:0050686,3.66e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.82e-13!48;UBERON:0002390!6.29e-12!45;UBERON:0003061!6.29e-12!45;UBERON:0002384!4.97e-09!46;UBERON:0002405!2.53e-08!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,6.61e-09,32;UBERON:0002384,1.59e-07,46;UBERON:0002371,1.88e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0.516493293766305,0,0,0,0.478632953972018,0.171200729931206,0.0874204024189974,0,0.607425802169478,0,0.788655413395594,1.64537320326887,1.27316895539409,0,0.595745707205312,0.261199789138935,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,2.51118978442145,3.906676722619,3.14114246384279,4.1176204162171,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0,2.75574786363617,4.79922184794726,2.28726408731516,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80885274925294,2.83082697826187,2.55747149456033,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,0.291480836629851,0,0.170870880797853,0,0,0.188368457004691,0,0.686334519619568,2.37969801991397,2.79902904647316,2.07299960706636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0.102710957164827,0,0,0,0.120195449519969,0,0.100966449948148,0.15241361331,0,0,0.384847366561318,0.350630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr2:112108160..112108174,- | |||
}} |
Revision as of 21:37, 13 September 2013
Short description: | p@chr2:112108160..112108174, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:112108160..112108174, - |
Coexpression cluster: | MCL_coexpression_mm9:522 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 1.39e-15 | 19 |
hematopoietic cell | 2.42e-11 | 32 |
hematopoietic oligopotent progenitor cell | 2.42e-11 | 32 |
hematopoietic stem cell | 2.42e-11 | 32 |
hematopoietic multipotent progenitor cell | 2.42e-11 | 32 |
stem cell | 2.66e-09 | 97 |
connective tissue cell | 1.59e-07 | 46 |
mesenchymal cell | 1.59e-07 | 46 |
myeloid cell | 1.88e-07 | 16 |
granulocyte monocyte progenitor cell | 5.60e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 6.61e-09 | 32 |
connective tissue | 1.59e-07 | 46 |
bone marrow | 1.88e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.21e-16 | 3 |
muscle cancer | 8.21e-16 | 3 |
organ system cancer | 3.66e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.