FFCP PHASE1:Mm9::chr6:99154482..99154491,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=334|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:99154482..99154491,-|id=chr6:99154482..99154491,-|ontology_enrichment_celltype=CL:0002608!4.27e-07!3|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.16e-18,5;UBERON:0002435,1.16e-18,5;UBERON:0000204,1.16e-18,5;UBERON:0010082,1.16e-18,5;UBERON:0002420,2.93e-12,8;UBERON:0007245,2.93e-12,8;UBERON:0010009,2.93e-12,8;UBERON:0010011,2.93e-12,8;UBERON:0000454,2.93e-12,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61245399607477,0.958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,6.40837195775608,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0|short_description=p@chr6:99154482..99154491,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=334 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr6:99154482..99154491,- | |||
|id=chr6:99154482..99154491,- | |||
|ontology_enrichment_celltype=CL:0002608!4.27e-07!3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.16e-18,5;UBERON:0002435,1.16e-18,5;UBERON:0000204,1.16e-18,5;UBERON:0010082,1.16e-18,5;UBERON:0002420,2.93e-12,8;UBERON:0007245,2.93e-12,8;UBERON:0010009,2.93e-12,8;UBERON:0010011,2.93e-12,8;UBERON:0000454,2.93e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61245399607477,0.958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0,6.40837195775608,0,0,0,0,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0.377252682772152,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr6:99154482..99154491,- | |||
}} | |||
Revision as of 11:05, 14 September 2013
| Short description: | p@chr6:99154482..99154491, - |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chr6:99154482..99154491, - |
| Coexpression cluster: | MCL_coexpression_mm9:334 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| corpus striatum | 1.16e-18 | 5 |
| striatum | 1.16e-18 | 5 |
| ventral part of telencephalon | 1.16e-18 | 5 |
| future corpus striatum | 1.16e-18 | 5 |
| basal ganglion | 2.93e-12 | 8 |
| nuclear complex of neuraxis | 2.93e-12 | 8 |
| aggregate regional part of brain | 2.93e-12 | 8 |
| collection of basal ganglia | 2.93e-12 | 8 |
| cerebral subcortex | 2.93e-12 | 8 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
