FFCP PHASE1:Mm9::chr8:18768194..18768209,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr8:18768194..18768209,-|id=chr8:18768194..18768209,-|ontology_enrichment_celltype=CL:0000115!9.86e-08!1;CL:0000213!9.86e-08!1;CL:0002078!9.86e-08!1;CL:0002262!9.86e-08!1;CL:1000398!9.86e-08!1;CL:0000355!3.72e-07!9|ontology_enrichment_celltype_v019_2=CL:0000355,1.01e-10,9|ontology_enrichment_disease=DOID:0060100!2.21e-20!3;DOID:4045!2.21e-20!3;DOID:0050686!1.73e-10!6|ontology_enrichment_disease_v019_2=DOID:0060100,7.89e-30,3;DOID:4045,7.89e-30,3;DOID:0050686,1.58e-15,6|ontology_enrichment_uberon=UBERON:0000353!9.86e-08!1;UBERON:0003497!9.86e-08!1;UBERON:0003909!9.86e-08!1;UBERON:0003835!9.86e-08!1;UBERON:0003513!9.86e-08!1;UBERON:0001281!9.86e-08!1;UBERON:0001280!9.86e-08!1;UBERON:0004647!9.86e-08!1;UBERON:0000305!1.53e-07!1;UBERON:0001134!3.72e-07!9;UBERON:0002036!3.72e-07!9;UBERON:0002385!3.72e-07!9;UBERON:0000486!3.72e-07!9;UBERON:0001015!3.72e-07!9;UBERON:0004290!3.72e-07!9;UBERON:0003082!3.72e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.01e-10,9;UBERON:0002036,1.01e-10,9;UBERON:0002385,1.01e-10,9;UBERON:0000486,1.01e-10,9;UBERON:0007503,1.01e-10,9;UBERON:0001015,1.01e-10,9;UBERON:0002329,1.01e-10,9;UBERON:0003082,1.01e-10,9;UBERON:0003059,1.01e-10,9;UBERON:0007282,1.01e-10,9;UBERON:0004290,1.01e-10,9;UBERON:0009618,1.01e-10,9;UBERON:0000383,9.34e-10,10;UBERON:0007524,5.79e-09,11;UBERON:0003077,5.79e-09,11;UBERON:0007285,5.79e-09,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.57057123192139,14.7057872007754,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr8:18768194..18768209,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr8:18768194..18768209,- | |||
|id=chr8:18768194..18768209,- | |||
|ontology_enrichment_celltype=CL:0000115!9.86e-08!1;CL:0000213!9.86e-08!1;CL:0002078!9.86e-08!1;CL:0002262!9.86e-08!1;CL:1000398!9.86e-08!1;CL:0000355!3.72e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,1.01e-10,9 | |||
|ontology_enrichment_disease=DOID:0060100!2.21e-20!3;DOID:4045!2.21e-20!3;DOID:0050686!1.73e-10!6 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,7.89e-30,3;DOID:4045,7.89e-30,3;DOID:0050686,1.58e-15,6 | |||
|ontology_enrichment_uberon=UBERON:0000353!9.86e-08!1;UBERON:0003497!9.86e-08!1;UBERON:0003909!9.86e-08!1;UBERON:0003835!9.86e-08!1;UBERON:0003513!9.86e-08!1;UBERON:0001281!9.86e-08!1;UBERON:0001280!9.86e-08!1;UBERON:0004647!9.86e-08!1;UBERON:0000305!1.53e-07!1;UBERON:0001134!3.72e-07!9;UBERON:0002036!3.72e-07!9;UBERON:0002385!3.72e-07!9;UBERON:0000486!3.72e-07!9;UBERON:0001015!3.72e-07!9;UBERON:0004290!3.72e-07!9;UBERON:0003082!3.72e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.01e-10,9;UBERON:0002036,1.01e-10,9;UBERON:0002385,1.01e-10,9;UBERON:0000486,1.01e-10,9;UBERON:0007503,1.01e-10,9;UBERON:0001015,1.01e-10,9;UBERON:0002329,1.01e-10,9;UBERON:0003082,1.01e-10,9;UBERON:0003059,1.01e-10,9;UBERON:0007282,1.01e-10,9;UBERON:0004290,1.01e-10,9;UBERON:0009618,1.01e-10,9;UBERON:0000383,9.34e-10,10;UBERON:0007524,5.79e-09,11;UBERON:0003077,5.79e-09,11;UBERON:0007285,5.79e-09,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.34825304589526,0.7813353445238,1.57057123192139,14.7057872007754,0,1.45653105909346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0,0.138199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:18768194..18768209,- | |||
}} |
Revision as of 15:19, 14 September 2013
Short description: | p@chr8:18768194..18768209, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:18768194..18768209, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 1.01e-10 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.01e-10 | 9 |
striated muscle tissue | 1.01e-10 | 9 |
muscle tissue | 1.01e-10 | 9 |
multilaminar epithelium | 1.01e-10 | 9 |
epithelial vesicle | 1.01e-10 | 9 |
musculature | 1.01e-10 | 9 |
somite | 1.01e-10 | 9 |
myotome | 1.01e-10 | 9 |
presomitic mesoderm | 1.01e-10 | 9 |
presumptive segmental plate | 1.01e-10 | 9 |
dermomyotome | 1.01e-10 | 9 |
trunk paraxial mesoderm | 1.01e-10 | 9 |
musculature of body | 9.34e-10 | 10 |
dense mesenchyme tissue | 5.79e-09 | 11 |
paraxial mesoderm | 5.79e-09 | 11 |
presumptive paraxial mesoderm | 5.79e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 7.89e-30 | 3 |
muscle cancer | 7.89e-30 | 3 |
organ system cancer | 1.58e-15 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.