FFCP PHASE1:Mm9::chr5:106131024..106131031,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:106131024..106131031,-|id=chr5:106131024..106131031,-|ontology_enrichment_celltype=CL:0002563!3.66e-10!9;CL:0002251!3.66e-10!9;CL:0002250!3.05e-08!3;CL:0000115!4.68e-07!1;CL:0000213!4.68e-07!1;CL:0002078!4.68e-07!1;CL:0002262!4.68e-07!1;CL:1000398!4.68e-07!1;CL:0000223!6.32e-07!20|ontology_enrichment_celltype_v019_2=CL:0000355,6.62e-14,9|ontology_enrichment_disease=DOID:0060100!8.48e-09!3;DOID:4045!8.48e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,4.15e-39,3;DOID:4045,4.15e-39,3;DOID:0050686,3.10e-20,6|ontology_enrichment_uberon=UBERON:0003350!3.66e-10!9;UBERON:0004808!3.66e-10!9;UBERON:0001277!3.66e-10!9;UBERON:0000485!2.39e-08!11;UBERON:0001242!4.36e-07!13;UBERON:0000060!4.36e-07!13;UBERON:0001262!4.36e-07!13;UBERON:0004786!4.36e-07!13;UBERON:0000353!4.68e-07!1;UBERON:0003497!4.68e-07!1;UBERON:0003909!4.68e-07!1;UBERON:0003835!4.68e-07!1;UBERON:0003513!4.68e-07!1;UBERON:0001281!4.68e-07!1;UBERON:0001280!4.68e-07!1;UBERON:0004647!4.68e-07!1|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.62e-14,9;UBERON:0002036,6.62e-14,9;UBERON:0002385,6.62e-14,9;UBERON:0000486,6.62e-14,9;UBERON:0007503,6.62e-14,9;UBERON:0001015,6.62e-14,9;UBERON:0002329,6.62e-14,9;UBERON:0003082,6.62e-14,9;UBERON:0003059,6.62e-14,9;UBERON:0007282,6.62e-14,9;UBERON:0004290,6.62e-14,9;UBERON:0009618,6.62e-14,9;UBERON:0000383,1.24e-12,10;UBERON:0007524,1.36e-11,11;UBERON:0003077,1.36e-11,11;UBERON:0007285,1.36e-11,11|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,1.5626706890476,0,15.8822501768374,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:106131024..106131031,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=6 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:106131024..106131031,- | |||
|id=chr5:106131024..106131031,- | |||
|ontology_enrichment_celltype=CL:0002563!3.66e-10!9;CL:0002251!3.66e-10!9;CL:0002250!3.05e-08!3;CL:0000115!4.68e-07!1;CL:0000213!4.68e-07!1;CL:0002078!4.68e-07!1;CL:0002262!4.68e-07!1;CL:1000398!4.68e-07!1;CL:0000223!6.32e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,6.62e-14,9 | |||
|ontology_enrichment_disease=DOID:0060100!8.48e-09!3;DOID:4045!8.48e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,4.15e-39,3;DOID:4045,4.15e-39,3;DOID:0050686,3.10e-20,6 | |||
|ontology_enrichment_uberon=UBERON:0003350!3.66e-10!9;UBERON:0004808!3.66e-10!9;UBERON:0001277!3.66e-10!9;UBERON:0000485!2.39e-08!11;UBERON:0001242!4.36e-07!13;UBERON:0000060!4.36e-07!13;UBERON:0001262!4.36e-07!13;UBERON:0004786!4.36e-07!13;UBERON:0000353!4.68e-07!1;UBERON:0003497!4.68e-07!1;UBERON:0003909!4.68e-07!1;UBERON:0003835!4.68e-07!1;UBERON:0003513!4.68e-07!1;UBERON:0001281!4.68e-07!1;UBERON:0001280!4.68e-07!1;UBERON:0004647!4.68e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,6.62e-14,9;UBERON:0002036,6.62e-14,9;UBERON:0002385,6.62e-14,9;UBERON:0000486,6.62e-14,9;UBERON:0007503,6.62e-14,9;UBERON:0001015,6.62e-14,9;UBERON:0002329,6.62e-14,9;UBERON:0003082,6.62e-14,9;UBERON:0003059,6.62e-14,9;UBERON:0007282,6.62e-14,9;UBERON:0004290,6.62e-14,9;UBERON:0009618,6.62e-14,9;UBERON:0000383,1.24e-12,10;UBERON:0007524,1.36e-11,11;UBERON:0003077,1.36e-11,11;UBERON:0007285,1.36e-11,11 | |||
|phase1_expression=0,0.348975407639361,0,0.30246421130683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,1.25559489221072,1.5626706890476,0,15.8822501768374,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:106131024..106131031,- | |||
}} |
Revision as of 05:49, 14 September 2013
Short description: | p@chr5:106131024..106131031, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:106131024..106131031, - |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 6.62e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 6.62e-14 | 9 |
striated muscle tissue | 6.62e-14 | 9 |
muscle tissue | 6.62e-14 | 9 |
multilaminar epithelium | 6.62e-14 | 9 |
epithelial vesicle | 6.62e-14 | 9 |
musculature | 6.62e-14 | 9 |
somite | 6.62e-14 | 9 |
myotome | 6.62e-14 | 9 |
presomitic mesoderm | 6.62e-14 | 9 |
presumptive segmental plate | 6.62e-14 | 9 |
dermomyotome | 6.62e-14 | 9 |
trunk paraxial mesoderm | 6.62e-14 | 9 |
musculature of body | 1.24e-12 | 10 |
dense mesenchyme tissue | 1.36e-11 | 11 |
paraxial mesoderm | 1.36e-11 | 11 |
presumptive paraxial mesoderm | 1.36e-11 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 4.15e-39 | 3 |
muscle cancer | 4.15e-39 | 3 |
organ system cancer | 3.10e-20 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.