Personal tools

FFCP PHASE1:Mm9::chr7:71081512..71081522,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=6|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:71081512..71081522,+|id=chr7:71081512..71081522,+|ontology_enrichment_celltype=CL:0000063!1.49e-07!66;CL:0002563!3.80e-07!9;CL:0002251!3.80e-07!9;CL:0000988!4.46e-07!32;CL:0002032!4.46e-07!32;CL:0000037!4.46e-07!32;CL:0000566!4.46e-07!32;CL:0000837!4.46e-07!32|ontology_enrichment_celltype_v019_2=CL:0000624,4.16e-13,8;CL:0000791,1.24e-11,9;CL:0000789,1.24e-11,9;CL:0002420,1.24e-11,9;CL:0002419,1.24e-11,9;CL:0000790,1.24e-11,9;CL:0000893,1.31e-11,6;CL:0002489,1.31e-11,6;CL:0000898,1.31e-11,6;CL:0000809,1.31e-11,6;CL:0000810,1.31e-11,6;CL:0000895,1.31e-11,6;CL:0000808,1.31e-11,6;CL:0000894,1.31e-11,6;CL:0000806,1.31e-11,6;CL:0000807,1.31e-11,6;CL:0000805,1.31e-11,6;CL:0002425,1.31e-11,6;CL:0002436,1.31e-11,6;CL:0002427,1.31e-11,6;CL:0002428,1.31e-11,6;CL:0002429,1.31e-11,6;CL:0002433,1.31e-11,6;CL:0002431,1.31e-11,6;CL:0002432,1.31e-11,6;CL:0000084,1.73e-09,11;CL:0000827,1.73e-09,11;CL:0000838,1.11e-08,12;CL:0000355,5.10e-08,9;CL:0000542,5.36e-08,13;CL:0000051,5.36e-08,13;CL:0000988,2.14e-07,32;CL:0002032,2.14e-07,32;CL:0000037,2.14e-07,32;CL:0000837,2.14e-07,32;CL:0000723,8.01e-07,91;CL:0000048,8.01e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-14,3;DOID:4045,2.43e-14,3;DOID:0050686,3.37e-12,6|ontology_enrichment_uberon=UBERON:0000490!4.38e-09!66;UBERON:0003350!3.80e-07!9;UBERON:0004808!3.80e-07!9;UBERON:0001277!3.80e-07!9;UBERON:0000485!6.45e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.10e-08,9;UBERON:0002036,5.10e-08,9;UBERON:0002385,5.10e-08,9;UBERON:0000486,5.10e-08,9;UBERON:0007503,5.10e-08,9;UBERON:0001015,5.10e-08,9;UBERON:0002329,5.10e-08,9;UBERON:0003082,5.10e-08,9;UBERON:0003059,5.10e-08,9;UBERON:0007282,5.10e-08,9;UBERON:0004290,5.10e-08,9;UBERON:0009618,5.10e-08,9;UBERON:0000383,3.18e-07,10|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.90739263392049,3.50627010962443,0.839396359559449,0.467225281191051,1.42035655785734,3.66050677594334,3.5109678948299,0.171217968225505,0.0797721589953364,1.36960583944965,1.66098764596095,0,0.607425802169478,0,0.630924330716475,0.411343300817216,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0.430942465371778,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,1.73310971850765,0.332469290716985,0.816677425049476,5.4409111995798,5.4693474116666,4.18818995179039,21.7645650571475,10.2456822743767,2.91306211818692,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0.503347818173209,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0.226714680320357,2.89864488701678,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,1.17112318804619,0,0.255457055208591,0.838705871541442,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,3.51106593656617,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.159454768657487,1.14704320301017,0,0.723245292907558,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.419854356970974,0.276399947608848,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0,0,0,0.596044064343795,0.240390899039938,0.295379054349154,0.403865799792591,0.15241361331,0.201652370273681,0.292373642219257,0.384847366561318,0.701261413089414,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843|short_description=p@chr7:71081512..71081522,+}}
|EntrezGene=NA
|HGNC=
|MCL_coexpression_id=6
|UniProt=NA
|association_with_transcript=NA
|description=CAGE_peak_at_chr7:71081512..71081522,+
|id=chr7:71081512..71081522,+
|ontology_enrichment_celltype=CL:0000063!1.49e-07!66;CL:0002563!3.80e-07!9;CL:0002251!3.80e-07!9;CL:0000988!4.46e-07!32;CL:0002032!4.46e-07!32;CL:0000037!4.46e-07!32;CL:0000566!4.46e-07!32;CL:0000837!4.46e-07!32
|ontology_enrichment_celltype_v019_2=CL:0000624,4.16e-13,8;CL:0000791,1.24e-11,9;CL:0000789,1.24e-11,9;CL:0002420,1.24e-11,9;CL:0002419,1.24e-11,9;CL:0000790,1.24e-11,9;CL:0000893,1.31e-11,6;CL:0002489,1.31e-11,6;CL:0000898,1.31e-11,6;CL:0000809,1.31e-11,6;CL:0000810,1.31e-11,6;CL:0000895,1.31e-11,6;CL:0000808,1.31e-11,6;CL:0000894,1.31e-11,6;CL:0000806,1.31e-11,6;CL:0000807,1.31e-11,6;CL:0000805,1.31e-11,6;CL:0002425,1.31e-11,6;CL:0002436,1.31e-11,6;CL:0002427,1.31e-11,6;CL:0002428,1.31e-11,6;CL:0002429,1.31e-11,6;CL:0002433,1.31e-11,6;CL:0002431,1.31e-11,6;CL:0002432,1.31e-11,6;CL:0000084,1.73e-09,11;CL:0000827,1.73e-09,11;CL:0000838,1.11e-08,12;CL:0000355,5.10e-08,9;CL:0000542,5.36e-08,13;CL:0000051,5.36e-08,13;CL:0000988,2.14e-07,32;CL:0002032,2.14e-07,32;CL:0000037,2.14e-07,32;CL:0000837,2.14e-07,32;CL:0000723,8.01e-07,91;CL:0000048,8.01e-07,91
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=DOID:0060100,2.43e-14,3;DOID:4045,2.43e-14,3;DOID:0050686,3.37e-12,6
|ontology_enrichment_uberon=UBERON:0000490!4.38e-09!66;UBERON:0003350!3.80e-07!9;UBERON:0004808!3.80e-07!9;UBERON:0001277!3.80e-07!9;UBERON:0000485!6.45e-07!11
|ontology_enrichment_uberon_v019_2=UBERON:0001134,5.10e-08,9;UBERON:0002036,5.10e-08,9;UBERON:0002385,5.10e-08,9;UBERON:0000486,5.10e-08,9;UBERON:0007503,5.10e-08,9;UBERON:0001015,5.10e-08,9;UBERON:0002329,5.10e-08,9;UBERON:0003082,5.10e-08,9;UBERON:0003059,5.10e-08,9;UBERON:0007282,5.10e-08,9;UBERON:0004290,5.10e-08,9;UBERON:0009618,5.10e-08,9;UBERON:0000383,3.18e-07,10
|phase1_expression=0.160148847104794,0.697950815278722,0.909998478779072,0.90739263392049,3.50627010962443,0.839396359559449,0.467225281191051,1.42035655785734,3.66050677594334,3.5109678948299,0.171217968225505,0.0797721589953364,1.36960583944965,1.66098764596095,0,0.607425802169478,0,0.630924330716475,0.411343300817216,0,0.0850432901510698,0.0992909512008853,0.261199789138935,0,0,0,0,0.430942465371778,0.190023419456374,0,0,1.90509202037889,0.61506478758457,0,1.73310971850765,0.332469290716985,0.816677425049476,5.4409111995798,5.4693474116666,4.18818995179039,21.7645650571475,10.2456822743767,2.91306211818692,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0.503347818173209,0.725362142011344,0.336093799142464,0.257259436035947,0,1.03134418455488,0,0,0,0.338844532069132,0,0,0.988866362566974,0,0,0,0.207379224616955,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0,0,0,0,0.142371680799103,0,0,0.226714680320357,2.89864488701678,0,0,0.539703191637817,0,0.448026887097336,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0,0,0,0,0,0.494389935468748,0.144599356919912,0,0,0,0.484875253135222,0,1.17112318804619,0,0.255457055208591,0.838705871541442,0.599902730993408,0.508280908292259,0,0,0,0,0,0,0,0,0.124406970610093,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,3.51106593656617,1.02939162845886,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0.162137619091711,0.292399974850665,0.878200461164203,0,0,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0.140271639780637,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.162135226775035,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.159454768657487,1.14704320301017,0,0.723245292907558,0,0,0.491764273019036,0,0.160550589987792,0,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0.608929898229199,0.23467170806371,0,0,0.32977250588296,0,0.241251699712623,0.119372344003136,0.164140899745061,0,0,0.341741761595705,0,0.185194527369712,0.188368457004691,0.27338845544205,0.228778173206523,0.509935289981566,0.419854356970974,0.276399947608848,0,0,0,0,0.209088296014469,0,0.269728692769641,0,0.523511883968059,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.104859344425711,0.241584120826006,0,0.316011120628178,0,0,0,0,0.596044064343795,0.240390899039938,0.295379054349154,0.403865799792591,0.15241361331,0.201652370273681,0.292373642219257,0.384847366561318,0.701261413089414,0.453460767230423,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0.675022500231806,0,0,0.51776031175182,0,0.399024873401031,0,0,0,0,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0,0.114870937911227,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0.526139422875686,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843
|short_description=p@chr7:71081512..71081522,+
}}

Revision as of 14:03, 14 September 2013

Short description:p@chr7:71081512..71081522, +
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr7:71081512..71081522, +
Coexpression cluster:MCL_coexpression_mm9:6
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr7:71081512..71081522+

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.91
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.84
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.66
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.61
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.09
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G85.44
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G921.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C51.03
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.90
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.84
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.00
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.29
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.44
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.24
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.42
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.38
thymus, neonate N30.CNhs11132.1393-42G20.70
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.11
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CD4-positive, alpha-beta T cell4.16e-138
mature alpha-beta T cell1.24e-119
alpha-beta T cell1.24e-119
immature T cell1.24e-119
mature T cell1.24e-119
immature alpha-beta T cell1.24e-119
thymocyte1.31e-116
double negative thymocyte1.31e-116
naive T cell1.31e-116
double-positive, alpha-beta thymocyte1.31e-116
CD4-positive, alpha-beta thymocyte1.31e-116
naive thymus-derived CD4-positive, alpha-beta T cell1.31e-116
DN4 thymocyte1.31e-116
DN1 thymic pro-T cell1.31e-116
DN2 thymocyte1.31e-116
DN3 thymocyte1.31e-116
immature single positive thymocyte1.31e-116
early T lineage precursor1.31e-116
mature CD4 single-positive thymocyte1.31e-116
resting double-positive thymocyte1.31e-116
double-positive blast1.31e-116
CD69-positive double-positive thymocyte1.31e-116
CD69-positive, CD4-positive single-positive thymocyte1.31e-116
CD4-positive, CD8-intermediate double-positive thymocyte1.31e-116
CD24-positive, CD4 single-positive thymocyte1.31e-116
T cell1.73e-0911
pro-T cell1.73e-0911
lymphoid lineage restricted progenitor cell1.11e-0812
multi-potent skeletal muscle stem cell5.10e-089
lymphocyte5.36e-0813
common lymphoid progenitor5.36e-0813
hematopoietic cell2.14e-0732
hematopoietic oligopotent progenitor cell2.14e-0732
hematopoietic stem cell2.14e-0732
hematopoietic multipotent progenitor cell2.14e-0732
somatic stem cell8.01e-0791
multi fate stem cell8.01e-0791

Uber anatomy
Ontology termp-valuen
skeletal muscle tissue5.10e-089
striated muscle tissue5.10e-089
muscle tissue5.10e-089
multilaminar epithelium5.10e-089
epithelial vesicle5.10e-089
musculature5.10e-089
somite5.10e-089
myotome5.10e-089
presomitic mesoderm5.10e-089
presumptive segmental plate5.10e-089
dermomyotome5.10e-089
trunk paraxial mesoderm5.10e-089
musculature of body3.18e-0710

Disease
Ontology termp-valuen
musculoskeletal system cancer2.43e-143
muscle cancer2.43e-143
organ system cancer3.37e-126







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr7:71081512..71081522,%2B&oldid=3050454"