FFCP PHASE1:Mm9::chr11:69730802..69730816,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=81|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:69730802..69730816,+|id=chr11:69730802..69730816,+|ontology_enrichment_celltype=CL:0000063!7.77e-17!66;CL:0000624!2.34e-15!8;CL:0000084!9.80e-14!11;CL:0000827!9.80e-14!11;CL:0000791!1.89e-13!9;CL:0000789!1.89e-13!9;CL:0002420!1.89e-13!9;CL:0002419!1.89e-13!9;CL:0000790!1.89e-13!9;CL:0000988!2.46e-13!32;CL:0002032!2.46e-13!32;CL:0000037!2.46e-13!32;CL:0000566!2.46e-13!32;CL:0000837!2.46e-13!32;CL:0000838!2.08e-12!12;CL:0002031!3.57e-12!25;CL:0000893!4.73e-12!6;CL:0002489!4.73e-12!6;CL:0000898!4.73e-12!6;CL:0000809!4.73e-12!6;CL:0000810!4.73e-12!6;CL:0000895!4.73e-12!6;CL:0000808!4.73e-12!6;CL:0000894!4.73e-12!6;CL:0000806!4.73e-12!6;CL:0000807!4.73e-12!6;CL:0000805!4.73e-12!6;CL:0002425!4.73e-12!6;CL:0002436!4.73e-12!6;CL:0002427!4.73e-12!6;CL:0002428!4.73e-12!6;CL:0002429!4.73e-12!6;CL:0002433!4.73e-12!6;CL:0002431!4.73e-12!6;CL:0002432!4.73e-12!6;CL:0000542!2.74e-11!13;CL:0000051!2.74e-11!13;CL:0000144!3.65e-11!121;CL:0000012!3.65e-11!121;CL:0000219!1.70e-10!54;CL:0002320!2.17e-10!46;CL:0000134!2.17e-10!46;CL:0000738!4.31e-10!17;CL:0002087!4.31e-10!17;CL:0000548!1.45e-09!115;CL:0000004!1.45e-09!115;CL:0000255!1.45e-09!115;CL:0002371!4.15e-09!118;CL:0000034!3.97e-07!97;CL:0000068!6.06e-07!3;CL:0002202!6.06e-07!3;CL:0000069!6.06e-07!3;CL:0002632!6.06e-07!3;CL:0002368!6.06e-07!3;CL:0000307!6.06e-07!3;CL:0000377!6.06e-07!3|ontology_enrichment_celltype_v019_2=CL:0000068,5.33e-29,3;CL:0002202,5.33e-29,3;CL:0000069,5.33e-29,3;CL:0002632,5.33e-29,3;CL:0002368,5.33e-29,3;CL:0000307,5.33e-29,3;CL:0000377,5.33e-29,3;CL:0000893,1.70e-26,6;CL:0002489,1.70e-26,6;CL:0000898,1.70e-26,6;CL:0000809,1.70e-26,6;CL:0000810,1.70e-26,6;CL:0000895,1.70e-26,6;CL:0000808,1.70e-26,6;CL:0000894,1.70e-26,6;CL:0000806,1.70e-26,6;CL:0000807,1.70e-26,6;CL:0000805,1.70e-26,6;CL:0002425,1.70e-26,6;CL:0002436,1.70e-26,6;CL:0002427,1.70e-26,6;CL:0002428,1.70e-26,6;CL:0002429,1.70e-26,6;CL:0002433,1.70e-26,6;CL:0002431,1.70e-26,6;CL:0002432,1.70e-26,6;CL:0000084,1.37e-22,11;CL:0000827,1.37e-22,11;CL:0000838,9.89e-21,12;CL:0000624,5.26e-20,8;CL:0000542,3.71e-19,13;CL:0000051,3.71e-19,13;CL:0000791,7.75e-18,9;CL:0000789,7.75e-18,9;CL:0002420,7.75e-18,9;CL:0002419,7.75e-18,9;CL:0000790,7.75e-18,9;CL:0000738,1.05e-14,17;CL:0002087,1.05e-14,17;CL:0002031,4.72e-10,25;CL:0000988,7.12e-08,32;CL:0002032,7.12e-08,32;CL:0000037,7.12e-08,32;CL:0000837,7.12e-08,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!3.00e-11!48;UBERON:0002384!2.17e-10!46;UBERON:0002390!1.16e-09!45;UBERON:0003061!1.16e-09!45;UBERON:0000072!9.43e-09!27;UBERON:0003126!6.06e-07!3;UBERON:0001005!6.06e-07!3;UBERON:0007196!6.06e-07!3;UBERON:0001558!6.06e-07!3;UBERON:0002405!7.62e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.33e-29,3;UBERON:0001005,5.33e-29,3;UBERON:0007196,5.33e-29,3;UBERON:0001558,5.33e-29,3;UBERON:0000072,2.03e-17,27;UBERON:0000065,1.97e-11,41;UBERON:0001004,3.72e-11,42;UBERON:0002370,3.34e-07,23;UBERON:0000974,3.34e-07,23;UBERON:0004807,3.34e-07,23;UBERON:0005058,3.34e-07,23;UBERON:0003351,3.34e-07,23;UBERON:0009113,3.34e-07,23;UBERON:0003295,3.34e-07,23;UBERON:0009722,3.34e-07,23;UBERON:0005562,3.34e-07,23;UBERON:0007690,3.34e-07,23;UBERON:0006562,6.50e-07,24;UBERON:0003408,6.50e-07,24;UBERON:0001557,6.50e-07,24;UBERON:0001042,6.50e-07,24;UBERON:0008814,6.50e-07,24;UBERON:0009145,6.50e-07,24|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.516493293766305,1.83025338797167,0.936258105287974,1.19852577757853,2.31339261086476,1.02720437958723,0.262261207256992,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,0,0,2.61199789138935,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,0,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:69730802..69730816,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=81 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:69730802..69730816,+ | |||
|id=chr11:69730802..69730816,+ | |||
|ontology_enrichment_celltype=CL:0000063!7.77e-17!66;CL:0000624!2.34e-15!8;CL:0000084!9.80e-14!11;CL:0000827!9.80e-14!11;CL:0000791!1.89e-13!9;CL:0000789!1.89e-13!9;CL:0002420!1.89e-13!9;CL:0002419!1.89e-13!9;CL:0000790!1.89e-13!9;CL:0000988!2.46e-13!32;CL:0002032!2.46e-13!32;CL:0000037!2.46e-13!32;CL:0000566!2.46e-13!32;CL:0000837!2.46e-13!32;CL:0000838!2.08e-12!12;CL:0002031!3.57e-12!25;CL:0000893!4.73e-12!6;CL:0002489!4.73e-12!6;CL:0000898!4.73e-12!6;CL:0000809!4.73e-12!6;CL:0000810!4.73e-12!6;CL:0000895!4.73e-12!6;CL:0000808!4.73e-12!6;CL:0000894!4.73e-12!6;CL:0000806!4.73e-12!6;CL:0000807!4.73e-12!6;CL:0000805!4.73e-12!6;CL:0002425!4.73e-12!6;CL:0002436!4.73e-12!6;CL:0002427!4.73e-12!6;CL:0002428!4.73e-12!6;CL:0002429!4.73e-12!6;CL:0002433!4.73e-12!6;CL:0002431!4.73e-12!6;CL:0002432!4.73e-12!6;CL:0000542!2.74e-11!13;CL:0000051!2.74e-11!13;CL:0000144!3.65e-11!121;CL:0000012!3.65e-11!121;CL:0000219!1.70e-10!54;CL:0002320!2.17e-10!46;CL:0000134!2.17e-10!46;CL:0000738!4.31e-10!17;CL:0002087!4.31e-10!17;CL:0000548!1.45e-09!115;CL:0000004!1.45e-09!115;CL:0000255!1.45e-09!115;CL:0002371!4.15e-09!118;CL:0000034!3.97e-07!97;CL:0000068!6.06e-07!3;CL:0002202!6.06e-07!3;CL:0000069!6.06e-07!3;CL:0002632!6.06e-07!3;CL:0002368!6.06e-07!3;CL:0000307!6.06e-07!3;CL:0000377!6.06e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,5.33e-29,3;CL:0002202,5.33e-29,3;CL:0000069,5.33e-29,3;CL:0002632,5.33e-29,3;CL:0002368,5.33e-29,3;CL:0000307,5.33e-29,3;CL:0000377,5.33e-29,3;CL:0000893,1.70e-26,6;CL:0002489,1.70e-26,6;CL:0000898,1.70e-26,6;CL:0000809,1.70e-26,6;CL:0000810,1.70e-26,6;CL:0000895,1.70e-26,6;CL:0000808,1.70e-26,6;CL:0000894,1.70e-26,6;CL:0000806,1.70e-26,6;CL:0000807,1.70e-26,6;CL:0000805,1.70e-26,6;CL:0002425,1.70e-26,6;CL:0002436,1.70e-26,6;CL:0002427,1.70e-26,6;CL:0002428,1.70e-26,6;CL:0002429,1.70e-26,6;CL:0002433,1.70e-26,6;CL:0002431,1.70e-26,6;CL:0002432,1.70e-26,6;CL:0000084,1.37e-22,11;CL:0000827,1.37e-22,11;CL:0000838,9.89e-21,12;CL:0000624,5.26e-20,8;CL:0000542,3.71e-19,13;CL:0000051,3.71e-19,13;CL:0000791,7.75e-18,9;CL:0000789,7.75e-18,9;CL:0002420,7.75e-18,9;CL:0002419,7.75e-18,9;CL:0000790,7.75e-18,9;CL:0000738,1.05e-14,17;CL:0002087,1.05e-14,17;CL:0002031,4.72e-10,25;CL:0000988,7.12e-08,32;CL:0002032,7.12e-08,32;CL:0000037,7.12e-08,32;CL:0000837,7.12e-08,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!3.00e-11!48;UBERON:0002384!2.17e-10!46;UBERON:0002390!1.16e-09!45;UBERON:0003061!1.16e-09!45;UBERON:0000072!9.43e-09!27;UBERON:0003126!6.06e-07!3;UBERON:0001005!6.06e-07!3;UBERON:0007196!6.06e-07!3;UBERON:0001558!6.06e-07!3;UBERON:0002405!7.62e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,5.33e-29,3;UBERON:0001005,5.33e-29,3;UBERON:0007196,5.33e-29,3;UBERON:0001558,5.33e-29,3;UBERON:0000072,2.03e-17,27;UBERON:0000065,1.97e-11,41;UBERON:0001004,3.72e-11,42;UBERON:0002370,3.34e-07,23;UBERON:0000974,3.34e-07,23;UBERON:0004807,3.34e-07,23;UBERON:0005058,3.34e-07,23;UBERON:0003351,3.34e-07,23;UBERON:0009113,3.34e-07,23;UBERON:0003295,3.34e-07,23;UBERON:0009722,3.34e-07,23;UBERON:0005562,3.34e-07,23;UBERON:0007690,3.34e-07,23;UBERON:0006562,6.50e-07,24;UBERON:0003408,6.50e-07,24;UBERON:0001557,6.50e-07,24;UBERON:0001042,6.50e-07,24;UBERON:0008814,6.50e-07,24;UBERON:0009145,6.50e-07,24 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.516493293766305,1.83025338797167,0.936258105287974,1.19852577757853,2.31339261086476,1.02720437958723,0.262261207256992,0,0,0.699561878128147,0.315462165358238,0.137114433605739,0.42438965179803,0,0,2.61199789138935,0.319984845586813,0.45881856213434,0,0,0.215471232685889,0.760093677825496,0,0,0,0,0,0.288851619751275,0.498703936075477,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21161909333094,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0.779358013808606,0.35333957451034,0.14084341977668,0,0,0,1.08245520505607,1.01343946190039,1.01104889002957,0,0,0,0.173485326766136,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0,0,0,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228778173206523,0.339956859987711,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0.120195449519969,0,0,0.0762068066549998,0.100826185136841,0,0,0,0,0,0.0897138566094757,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:69730802..69730816,+ | |||
}} |
Revision as of 20:40, 12 September 2013
Short description: | p@chr11:69730802..69730816, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:69730802..69730816, + |
Coexpression cluster: | MCL_coexpression_mm9:81 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trachea | 5.33e-29 | 3 |
respiratory airway | 5.33e-29 | 3 |
tracheobronchial tree | 5.33e-29 | 3 |
lower respiratory tract | 5.33e-29 | 3 |
segment of respiratory tract | 2.03e-17 | 27 |
respiratory tract | 1.97e-11 | 41 |
respiratory system | 3.72e-11 | 42 |
thymus | 3.34e-07 | 23 |
neck | 3.34e-07 | 23 |
respiratory system epithelium | 3.34e-07 | 23 |
hemolymphoid system gland | 3.34e-07 | 23 |
pharyngeal epithelium | 3.34e-07 | 23 |
thymic region | 3.34e-07 | 23 |
pharyngeal gland | 3.34e-07 | 23 |
entire pharyngeal arch endoderm | 3.34e-07 | 23 |
thymus primordium | 3.34e-07 | 23 |
early pharyngeal endoderm | 3.34e-07 | 23 |
pharynx | 6.50e-07 | 24 |
gland of gut | 6.50e-07 | 24 |
upper respiratory tract | 6.50e-07 | 24 |
chordate pharynx | 6.50e-07 | 24 |
pharyngeal arch system | 6.50e-07 | 24 |
pharyngeal region of foregut | 6.50e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.