FFCP PHASE1:Mm9::chr1:193615281..193615282,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=226|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:193615281..193615282,-|id=chr1:193615281..193615282,-|ontology_enrichment_celltype=CL:0002563!2.97e-07!9;CL:0002251!2.97e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.54e-10,32;CL:0002032,1.54e-10,32;CL:0000037,1.54e-10,32;CL:0000837,1.54e-10,32;CL:0000049,1.60e-10,19;CL:0000239,1.63e-07,6;CL:0000677,1.63e-07,6;CL:0000584,1.63e-07,6;CL:0002563,3.06e-07,9;CL:0002251,3.06e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.02e-14!59;UBERON:0000344!1.87e-13!15;UBERON:0000160!1.74e-12!43;UBERON:0001242!3.27e-11!13;UBERON:0000060!3.27e-11!13;UBERON:0001262!3.27e-11!13;UBERON:0004786!3.27e-11!13;UBERON:0004923!3.95e-10!24;UBERON:0004119!3.71e-09!130;UBERON:0000925!3.71e-09!130;UBERON:0006595!3.71e-09!130;UBERON:0001007!3.24e-08!128;UBERON:0001555!3.24e-08!128;UBERON:0007026!3.24e-08!128;UBERON:0003350!2.97e-07!9;UBERON:0004808!2.97e-07!9;UBERON:0001277!2.97e-07!9;UBERON:0004921!3.79e-07!126;UBERON:0004185!3.79e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.42e-20,15;UBERON:0001242,1.40e-15,13;UBERON:0001262,1.40e-15,13;UBERON:0004786,1.40e-15,13;UBERON:0004923,2.32e-14,24;UBERON:0000160,3.42e-14,31;UBERON:0000331,3.37e-09,3;UBERON:0002116,3.37e-09,3;UBERON:0001204,3.37e-09,3;UBERON:0001168,3.37e-09,3;UBERON:0005409,2.27e-08,47;UBERON:0003350,3.06e-07,9;UBERON:0004808,3.06e-07,9;UBERON:0001277,3.06e-07,9;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2;UBERON:0002108,5.45e-07,4|phase1_expression=0,0,1.36499771816861,3.62957053568196,2.00358291978539,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0.404950534779652,0,2.5236973228659,1.91960207048034,1.69755860719212,0,3.87234709683453,4.4403964153619,4.7997726838022,4.35877634027623,1.72269589234506,0.86152399231815,1.07735616342945,5.51067916423484,1.26015064879965,2.88249663851896,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,41.0061874679869,0,0,1.27728527604296,2.03685711660064,1.79970819298022,3.04968544975355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.58670339998127,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0.474529061544512,1.4822905925161,1.25667604400135,0.994782360205754,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.64270195644597,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,1.02710957164827,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0.167884616364078,0,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0|short_description=p@chr1:193615281..193615282,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=226 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:193615281..193615282,- | |||
|id=chr1:193615281..193615282,- | |||
|ontology_enrichment_celltype=CL:0002563!2.97e-07!9;CL:0002251!2.97e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.54e-10,32;CL:0002032,1.54e-10,32;CL:0000037,1.54e-10,32;CL:0000837,1.54e-10,32;CL:0000049,1.60e-10,19;CL:0000239,1.63e-07,6;CL:0000677,1.63e-07,6;CL:0000584,1.63e-07,6;CL:0002563,3.06e-07,9;CL:0002251,3.06e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.02e-14!59;UBERON:0000344!1.87e-13!15;UBERON:0000160!1.74e-12!43;UBERON:0001242!3.27e-11!13;UBERON:0000060!3.27e-11!13;UBERON:0001262!3.27e-11!13;UBERON:0004786!3.27e-11!13;UBERON:0004923!3.95e-10!24;UBERON:0004119!3.71e-09!130;UBERON:0000925!3.71e-09!130;UBERON:0006595!3.71e-09!130;UBERON:0001007!3.24e-08!128;UBERON:0001555!3.24e-08!128;UBERON:0007026!3.24e-08!128;UBERON:0003350!2.97e-07!9;UBERON:0004808!2.97e-07!9;UBERON:0001277!2.97e-07!9;UBERON:0004921!3.79e-07!126;UBERON:0004185!3.79e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.42e-20,15;UBERON:0001242,1.40e-15,13;UBERON:0001262,1.40e-15,13;UBERON:0004786,1.40e-15,13;UBERON:0004923,2.32e-14,24;UBERON:0000160,3.42e-14,31;UBERON:0000331,3.37e-09,3;UBERON:0002116,3.37e-09,3;UBERON:0001204,3.37e-09,3;UBERON:0001168,3.37e-09,3;UBERON:0005409,2.27e-08,47;UBERON:0003350,3.06e-07,9;UBERON:0004808,3.06e-07,9;UBERON:0001277,3.06e-07,9;UBERON:0001962,3.22e-07,2;UBERON:0001961,3.22e-07,2;UBERON:0001744,3.22e-07,2;UBERON:0002108,5.45e-07,4 | |||
|phase1_expression=0,0,1.36499771816861,3.62957053568196,2.00358291978539,0.671517087647559,1.63528848416868,0,0,0,0,0,0,0,0,0.404950534779652,0,2.5236973228659,1.91960207048034,1.69755860719212,0,3.87234709683453,4.4403964153619,4.7997726838022,4.35877634027623,1.72269589234506,0.86152399231815,1.07735616342945,5.51067916423484,1.26015064879965,2.88249663851896,0,0,0,0.577703239502549,0.498703936075477,1.02084678131185,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,3.02008690903925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,1.76922110389975,0,0,0,41.0061874679869,0,0,1.27728527604296,2.03685711660064,1.79970819298022,3.04968544975355,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0.219195732427575,0,0,0,0,1.40442637462647,2.57347907114715,2.27330799516474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.58670339998127,0,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0.474529061544512,1.4822905925161,1.25667604400135,0.994782360205754,0,0.898819408654221,0.648414149624083,0.398282546508734,0,0.228497025219458,0,0.203651327845314,0,0.350679099451593,0,0,0,0,0,0.166845105716094,0,0.224862112384854,0,0,0,0.287696137450811,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0.221464689648775,0,0,0,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,1.64270195644597,0.42366414172764,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0.185194527369712,0,0,0,0.339956859987711,0.139951452323658,0.414599921413271,0.954670618015114,0.158167996790568,0.203319467126849,0.216010681643603,0.627264888043406,0.436725127492355,0.134864346384821,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0.202725215290164,1.02710957164827,0.129920822977795,0.358053391334963,0,0,0,0.100966449948148,0,0,0.194915761479505,0,0.116876902181569,0,0,0,0.167884616364078,0,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0.280924522409647,0,0,0,0,0,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0 | |||
|short_description=p@chr1:193615281..193615282,- | |||
}} |
Revision as of 20:06, 13 September 2013
Short description: | p@chr1:193615281..193615282, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:193615281..193615282, - |
Coexpression cluster: | MCL_coexpression_mm9:226 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.54e-10 | 32 |
hematopoietic oligopotent progenitor cell | 1.54e-10 | 32 |
hematopoietic stem cell | 1.54e-10 | 32 |
hematopoietic multipotent progenitor cell | 1.54e-10 | 32 |
common myeloid progenitor | 1.60e-10 | 19 |
brush border epithelial cell | 1.63e-07 | 6 |
gut absorptive cell | 1.63e-07 | 6 |
enterocyte | 1.63e-07 | 6 |
intestinal epithelial cell | 3.06e-07 | 9 |
epithelial cell of alimentary canal | 3.06e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.42e-20 | 15 |
intestinal mucosa | 1.40e-15 | 13 |
wall of intestine | 1.40e-15 | 13 |
gastrointestinal system mucosa | 1.40e-15 | 13 |
organ component layer | 2.32e-14 | 24 |
intestine | 3.42e-14 | 31 |
ileal mucosa | 3.37e-09 | 3 |
ileum | 3.37e-09 | 3 |
mucosa of small intestine | 3.37e-09 | 3 |
wall of small intestine | 3.37e-09 | 3 |
gastrointestinal system | 2.27e-08 | 47 |
epithelium of mucosa | 3.06e-07 | 9 |
gastrointestinal system epithelium | 3.06e-07 | 9 |
intestinal epithelium | 3.06e-07 | 9 |
gut-associated lymphoid tissue | 3.22e-07 | 2 |
mucosa-associated lymphoid tissue | 3.22e-07 | 2 |
lymphoid tissue | 3.22e-07 | 2 |
small intestine | 5.45e-07 | 4 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.