FFCP PHASE1:Mm9::chr5:32000423..32000440,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=107976|HGNC=|MCL_coexpression_id=66|UniProt=Q8K3W0,E9Q8Q1,D3Z7P0|association_with_transcript=0bp_to_ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000128132,ENSMUST00000131995,NM_144541,NM_181279,NM_181280,NM_181281,NM_181282,uc008wyx.1,uc008wyy.1,uc008wyz.1,uc008wza.1,uc008wzb.1,uc008wzc.1,uc008wzd.1,uc008wze.1,uc008wzf.1_5end|description=CAGE_peak_3_at_Bre_5end|id=chr5:32000423..32000440,+|ontology_enrichment_celltype=CL:0000542!2.14e-12!13;CL:0000051!2.14e-12!13;CL:0000838!9.82e-12!12;CL:0000988!5.49e-11!32;CL:0002032!5.49e-11!32;CL:0000037!5.49e-11!32;CL:0000566!5.49e-11!32;CL:0000837!5.49e-11!32;CL:0000084!9.81e-11!11;CL:0000827!9.81e-11!11;CL:0000791!3.22e-10!9;CL:0000789!3.22e-10!9;CL:0002420!3.22e-10!9;CL:0002419!3.22e-10!9;CL:0000790!3.22e-10!9;CL:0000063!2.24e-09!66;CL:0000624!3.29e-09!8;CL:0000738!2.13e-08!17;CL:0002087!2.13e-08!17;CL:0002031!1.89e-07!25;CL:0000893!3.63e-07!6;CL:0002489!3.63e-07!6;CL:0000898!3.63e-07!6;CL:0000809!3.63e-07!6;CL:0000810!3.63e-07!6;CL:0000895!3.63e-07!6;CL:0000808!3.63e-07!6;CL:0000894!3.63e-07!6;CL:0000806!3.63e-07!6;CL:0000807!3.63e-07!6;CL:0000805!3.63e-07!6;CL:0002425!3.63e-07!6;CL:0002436!3.63e-07!6;CL:0002427!3.63e-07!6;CL:0002428!3.63e-07!6;CL:0002429!3.63e-07!6;CL:0002433!3.63e-07!6;CL:0002431!3.63e-07!6;CL:0002432!3.63e-07!6;CL:0002320!4.11e-07!46;CL:0000134!4.11e-07!46|ontology_enrichment_celltype_v019_2=CL:0000791,1.31e-23,9;CL:0000789,1.31e-23,9;CL:0002420,1.31e-23,9;CL:0002419,1.31e-23,9;CL:0000790,1.31e-23,9;CL:0000838,4.69e-22,12;CL:0000624,1.88e-20,8;CL:0000542,3.04e-20,13;CL:0000051,3.04e-20,13;CL:0000084,4.22e-19,11;CL:0000827,4.22e-19,11;CL:0000738,4.00e-15,17;CL:0002087,4.00e-15,17;CL:0000893,3.86e-14,6;CL:0002489,3.86e-14,6;CL:0000898,3.86e-14,6;CL:0000809,3.86e-14,6;CL:0000810,3.86e-14,6;CL:0000895,3.86e-14,6;CL:0000808,3.86e-14,6;CL:0000894,3.86e-14,6;CL:0000806,3.86e-14,6;CL:0000807,3.86e-14,6;CL:0000805,3.86e-14,6;CL:0002425,3.86e-14,6;CL:0002436,3.86e-14,6;CL:0002427,3.86e-14,6;CL:0002428,3.86e-14,6;CL:0002429,3.86e-14,6;CL:0002433,3.86e-14,6;CL:0002431,3.86e-14,6;CL:0002432,3.86e-14,6;CL:0000988,4.58e-13,32;CL:0002032,4.58e-13,32;CL:0000037,4.58e-13,32;CL:0000837,4.58e-13,32;CL:0002031,5.12e-12,25;CL:0000034,4.68e-10,97;CL:0002320,6.15e-10,46;CL:0000134,6.15e-10,46;CL:0000219,4.28e-08,54;CL:0000723,1.83e-07,91;CL:0000048,1.83e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,2.33e-11,3;DOID:4045,2.33e-11,3|ontology_enrichment_uberon=UBERON:0002384!4.11e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.15e-10,46|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.233612640595526,6.06879620175408,2.39340827657833,3.04283884218592,2.05461561870606,0.638177271962691,7.01922992717943,3.4968160967599,0,0.404950534779652,0,0.788655413395594,0.548457734422955,1.27316895539409,0.0850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,2.02196133825892,0.166234645358492,0.204169356262369,6.69650609179052,7.813353445238,3.14114246384279,18.8234076169925,13.6609096991689,8.25367600152961,0,0,0.367093504323363,0,0,0.219686182734472,0,0,0,4.69791296961662,5.80289713609076,5.04140698713696,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0,0,0,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.599075622529601,1.79970819298022,0.635351135365324,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,2.1066395619397,0.51469581422943,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.948339504765408,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,1.18984900995699,2.93898049879682,1.24379976423981,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0,0,0,0,0.117357238645754,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0|short_description=p3@Bre}} | ||
|EntrezGene=107976 | |||
|HGNC= | |||
|MCL_coexpression_id=66 | |||
|UniProt=Q8K3W0,E9Q8Q1,D3Z7P0 | |||
|association_with_transcript=0bp_to_ENSMUST00000063813,ENSMUST00000071531,ENSMUST00000114507,ENSMUST00000128132,ENSMUST00000131995,NM_144541,NM_181279,NM_181280,NM_181281,NM_181282,uc008wyx.1,uc008wyy.1,uc008wyz.1,uc008wza.1,uc008wzb.1,uc008wzc.1,uc008wzd.1,uc008wze.1,uc008wzf.1_5end | |||
|description=CAGE_peak_3_at_Bre_5end | |||
|id=chr5:32000423..32000440,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.14e-12!13;CL:0000051!2.14e-12!13;CL:0000838!9.82e-12!12;CL:0000988!5.49e-11!32;CL:0002032!5.49e-11!32;CL:0000037!5.49e-11!32;CL:0000566!5.49e-11!32;CL:0000837!5.49e-11!32;CL:0000084!9.81e-11!11;CL:0000827!9.81e-11!11;CL:0000791!3.22e-10!9;CL:0000789!3.22e-10!9;CL:0002420!3.22e-10!9;CL:0002419!3.22e-10!9;CL:0000790!3.22e-10!9;CL:0000063!2.24e-09!66;CL:0000624!3.29e-09!8;CL:0000738!2.13e-08!17;CL:0002087!2.13e-08!17;CL:0002031!1.89e-07!25;CL:0000893!3.63e-07!6;CL:0002489!3.63e-07!6;CL:0000898!3.63e-07!6;CL:0000809!3.63e-07!6;CL:0000810!3.63e-07!6;CL:0000895!3.63e-07!6;CL:0000808!3.63e-07!6;CL:0000894!3.63e-07!6;CL:0000806!3.63e-07!6;CL:0000807!3.63e-07!6;CL:0000805!3.63e-07!6;CL:0002425!3.63e-07!6;CL:0002436!3.63e-07!6;CL:0002427!3.63e-07!6;CL:0002428!3.63e-07!6;CL:0002429!3.63e-07!6;CL:0002433!3.63e-07!6;CL:0002431!3.63e-07!6;CL:0002432!3.63e-07!6;CL:0002320!4.11e-07!46;CL:0000134!4.11e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.31e-23,9;CL:0000789,1.31e-23,9;CL:0002420,1.31e-23,9;CL:0002419,1.31e-23,9;CL:0000790,1.31e-23,9;CL:0000838,4.69e-22,12;CL:0000624,1.88e-20,8;CL:0000542,3.04e-20,13;CL:0000051,3.04e-20,13;CL:0000084,4.22e-19,11;CL:0000827,4.22e-19,11;CL:0000738,4.00e-15,17;CL:0002087,4.00e-15,17;CL:0000893,3.86e-14,6;CL:0002489,3.86e-14,6;CL:0000898,3.86e-14,6;CL:0000809,3.86e-14,6;CL:0000810,3.86e-14,6;CL:0000895,3.86e-14,6;CL:0000808,3.86e-14,6;CL:0000894,3.86e-14,6;CL:0000806,3.86e-14,6;CL:0000807,3.86e-14,6;CL:0000805,3.86e-14,6;CL:0002425,3.86e-14,6;CL:0002436,3.86e-14,6;CL:0002427,3.86e-14,6;CL:0002428,3.86e-14,6;CL:0002429,3.86e-14,6;CL:0002433,3.86e-14,6;CL:0002431,3.86e-14,6;CL:0002432,3.86e-14,6;CL:0000988,4.58e-13,32;CL:0002032,4.58e-13,32;CL:0000037,4.58e-13,32;CL:0000837,4.58e-13,32;CL:0002031,5.12e-12,25;CL:0000034,4.68e-10,97;CL:0002320,6.15e-10,46;CL:0000134,6.15e-10,46;CL:0000219,4.28e-08,54;CL:0000723,1.83e-07,91;CL:0000048,1.83e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.33e-11,3;DOID:4045,2.33e-11,3 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.11e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.15e-10,46 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.30246421130683,1.00179145989269,0.16787927191189,0.233612640595526,6.06879620175408,2.39340827657833,3.04283884218592,2.05461561870606,0.638177271962691,7.01922992717943,3.4968160967599,0,0.404950534779652,0,0.788655413395594,0.548457734422955,1.27316895539409,0.0850432901510698,0.0992909512008853,0.261199789138935,0.319984845586813,0.22940928106717,0,0,0,0,0,0,0,0,0,2.02196133825892,0.166234645358492,0.204169356262369,6.69650609179052,7.813353445238,3.14114246384279,18.8234076169925,13.6609096991689,8.25367600152961,0,0,0.367093504323363,0,0,0.219686182734472,0,0,0,4.69791296961662,5.80289713609076,5.04140698713696,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.45839474333043,0,0,0,0,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,0,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0.484875253135222,0,0,0,0,0.599075622529601,1.79970819298022,0.635351135365324,0,0.457500602818626,0,0,0,0.20778804455956,0.162241263067758,0.101839363850316,0,0,0,0,0,0,0,0.0680364991513279,0,0.187403449119458,0,0,0,0,0,0,0,0,0,2.1066395619397,0.51469581422943,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0.102904612379284,0,0,0.426576501070468,0.232236671860439,0,0,0,0,0,0.329397909448022,0.251335208800269,0,0,0,0,0,0.948339504765408,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0.246794327843601,0,0,0,0,0,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,1.03135543248187,0.340439605753788,0,0,0,0,0,0.164549020602121,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,0,0,0,0.185194527369712,0,0,0,1.18984900995699,2.93898049879682,1.24379976423981,0,0.316335993581135,0.203319467126849,0.108005340821801,0,0,0.269728692769641,0.247960367176008,0.26175594198403,0.129614973291793,0,1.69107881605257,0,0,0,0,0,0.117357238645754,0,0,0,1.15212002503146,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0,0,0.386379188064381,0.187682475451182,0,0,0,0,0,0,0,0.685082519770642,0,0,0,0.453142408984205,0,0,0,0,0,0,0.183843508450014,0,0,0.320919209591815,0,0,0,0,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p3@Bre | |||
}} |
Revision as of 07:27, 14 September 2013
Short description: | p3@Bre |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Bre_5end |
Coexpression cluster: | MCL_coexpression_mm9:66 |
Association with transcript: | 0bp_to_ENSMUST00000063813, ENSMUST00000071531, ENSMUST00000114507, ENSMUST00000128132, ENSMUST00000131995, NM_144541, NM_181279, NM_181280, NM_181281, NM_181282, uc008wyx.1, uc008wyy.1, uc008wyz.1, uc008wza.1, uc008wzb.1, uc008wzc.1, uc008wzd.1, uc008wze.1, uc008wzf.1_5end |
EntrezGene: | Bre |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.15e-10 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.33e-11 | 3 |
muscle cancer | 2.33e-11 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.