FFCP PHASE1:Mm9::chr12:114666863..114666873,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=18|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:114666863..114666873,-|id=chr12:114666863..114666873,-|ontology_enrichment_celltype=CL:0000988!7.50e-08!32;CL:0002032!7.50e-08!32;CL:0000037!7.50e-08!32;CL:0000566!7.50e-08!32;CL:0000837!7.50e-08!32|ontology_enrichment_celltype_v019_2=CL:0000553,2.49e-17,6;CL:0000556,2.49e-17,6;CL:0000988,1.07e-16,32;CL:0002032,1.07e-16,32;CL:0000037,1.07e-16,32;CL:0000837,1.07e-16,32;CL:0002031,7.95e-16,25;CL:0000945,2.59e-12,1;CL:0000236,2.59e-12,1;CL:0000826,2.59e-12,1;CL:0000050,8.55e-12,9;CL:0002320,1.26e-11,46;CL:0000134,1.26e-11,46;CL:0000219,6.76e-10,54;CL:0000049,1.02e-09,19;CL:0000838,9.71e-09,12;CL:0000839,2.31e-08,13;CL:0000542,4.09e-08,13;CL:0000051,4.09e-08,13;CL:0000763,6.65e-07,16|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!6.62e-10!48;UBERON:0002405!4.41e-09!70;UBERON:0002106!7.59e-09!6;UBERON:0004457!7.59e-09!6;UBERON:0000042!7.59e-09!6;UBERON:0004854!7.59e-09!6;UBERON:0009034!7.59e-09!6;UBERON:0002095!7.59e-09!6;UBERON:0004782!7.59e-09!6;UBERON:0003281!7.59e-09!6;UBERON:0009664!7.59e-09!6;UBERON:0002296!7.59e-09!6;UBERON:0005602!7.59e-09!6;UBERON:0001179!7.59e-09!6;UBERON:0006293!7.59e-09!6;UBERON:0002390!3.64e-08!45;UBERON:0003061!3.64e-08!45;UBERON:0003887!4.38e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-12,1;UBERON:0001097,1.55e-12,1;UBERON:0003968,1.55e-12,1;UBERON:0001467,1.55e-12,1;UBERON:0002384,1.26e-11,46;UBERON:0002371,6.65e-07,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,2.36596624018678,3.56497527374921,1.69755860719212,0,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0.718890747035522,0,1.39777249780371,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,0.410082683163076,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:114666863..114666873,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:114666863..114666873,- | |||
|id=chr12:114666863..114666873,- | |||
|ontology_enrichment_celltype=CL:0000988!7.50e-08!32;CL:0002032!7.50e-08!32;CL:0000037!7.50e-08!32;CL:0000566!7.50e-08!32;CL:0000837!7.50e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,2.49e-17,6;CL:0000556,2.49e-17,6;CL:0000988,1.07e-16,32;CL:0002032,1.07e-16,32;CL:0000037,1.07e-16,32;CL:0000837,1.07e-16,32;CL:0002031,7.95e-16,25;CL:0000945,2.59e-12,1;CL:0000236,2.59e-12,1;CL:0000826,2.59e-12,1;CL:0000050,8.55e-12,9;CL:0002320,1.26e-11,46;CL:0000134,1.26e-11,46;CL:0000219,6.76e-10,54;CL:0000049,1.02e-09,19;CL:0000838,9.71e-09,12;CL:0000839,2.31e-08,13;CL:0000542,4.09e-08,13;CL:0000051,4.09e-08,13;CL:0000763,6.65e-07,16 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.62e-10!48;UBERON:0002405!4.41e-09!70;UBERON:0002106!7.59e-09!6;UBERON:0004457!7.59e-09!6;UBERON:0000042!7.59e-09!6;UBERON:0004854!7.59e-09!6;UBERON:0009034!7.59e-09!6;UBERON:0002095!7.59e-09!6;UBERON:0004782!7.59e-09!6;UBERON:0003281!7.59e-09!6;UBERON:0009664!7.59e-09!6;UBERON:0002296!7.59e-09!6;UBERON:0005602!7.59e-09!6;UBERON:0001179!7.59e-09!6;UBERON:0006293!7.59e-09!6;UBERON:0002390!3.64e-08!45;UBERON:0003061!3.64e-08!45;UBERON:0003887!4.38e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.55e-12,1;UBERON:0001097,1.55e-12,1;UBERON:0003968,1.55e-12,1;UBERON:0001467,1.55e-12,1;UBERON:0002384,1.26e-11,46;UBERON:0002371,6.65e-07,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404950534779652,0,2.36596624018678,3.56497527374921,1.69755860719212,0,1.29078236561151,1.04479915655574,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01339127269284,0,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,2.58937883647172,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0,0,0,0,0,0.510914110417183,0.718890747035522,0,1.39777249780371,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0.180062129805349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0.162135226775035,0.274561413188081,0,0,0.312037673114561,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0.185194527369712,0.565105371014073,0.410082683163076,0.686334519619568,0,0.139951452323658,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0.0962118416403295,0.233753804363138,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:114666863..114666873,- | |||
}} |
Revision as of 22:27, 12 September 2013
Short description: | p@chr12:114666863..114666873, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114666863..114666873, - |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 2.49e-17 | 6 |
megakaryocyte | 2.49e-17 | 6 |
hematopoietic cell | 1.07e-16 | 32 |
hematopoietic oligopotent progenitor cell | 1.07e-16 | 32 |
hematopoietic stem cell | 1.07e-16 | 32 |
hematopoietic multipotent progenitor cell | 1.07e-16 | 32 |
hematopoietic lineage restricted progenitor cell | 7.95e-16 | 25 |
lymphocyte of B lineage | 2.59e-12 | 1 |
B cell | 2.59e-12 | 1 |
pro-B cell | 2.59e-12 | 1 |
megakaryocyte-erythroid progenitor cell | 8.55e-12 | 9 |
connective tissue cell | 1.26e-11 | 46 |
mesenchymal cell | 1.26e-11 | 46 |
motile cell | 6.76e-10 | 54 |
common myeloid progenitor | 1.02e-09 | 19 |
lymphoid lineage restricted progenitor cell | 9.71e-09 | 12 |
myeloid lineage restricted progenitor cell | 2.31e-08 | 13 |
lymphocyte | 4.09e-08 | 13 |
common lymphoid progenitor | 4.09e-08 | 13 |
myeloid cell | 6.65e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.55e-12 | 1 |
axillary lymph node | 1.55e-12 | 1 |
peripheral lymph node | 1.55e-12 | 1 |
shoulder | 1.55e-12 | 1 |
connective tissue | 1.26e-11 | 46 |
bone marrow | 6.65e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.