FFCP PHASE1:Mm9::chr1:177562099..177562109,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=98256|HGNC=|MCL_coexpression_id=18|UniProt=Q91WN4|association_with_transcript=-17bp_to_ENSMUST00000040250_5end|description=CAGE_peak_9_at_Kmo_5end|id=chr1:177562099..177562109,+|ontology_enrichment_celltype=CL:0000553!2.69e-14!6;CL:0000556!2.69e-14!6;CL:0000050!3.19e-09!9;CL:0002027!1.01e-07!3;CL:0002006!1.01e-07!3;CL:0002024!1.01e-07!3;CL:0000414!2.23e-07!11|ontology_enrichment_celltype_v019_2=CL:0000553,1.45e-29,6;CL:0000556,1.45e-29,6;CL:0000050,6.57e-20,9;CL:0000839,6.11e-14,13;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0000763,2.07e-11,16;CL:0002031,3.38e-11,25;CL:0000049,1.13e-09,19;CL:0000988,8.62e-09,32;CL:0002032,8.62e-09,32;CL:0000037,8.62e-09,32;CL:0000837,8.62e-09,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.22e-12!48;UBERON:0002390!5.20e-10!45;UBERON:0003061!5.20e-10!45;UBERON:0002405!9.80e-08!70;UBERON:0003887!1.83e-07!10;UBERON:0001474!4.95e-07!22;UBERON:0004765!4.95e-07!22;UBERON:0001434!4.95e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.07e-11,16;UBERON:0002193,3.46e-11,48;UBERON:0002405,3.46e-11,48;UBERON:0002390,8.49e-09,45;UBERON:0003061,8.49e-09,45;UBERON:0001474,2.09e-08,22;UBERON:0004765,2.09e-08,22;UBERON:0001434,2.09e-08,22;UBERON:0002106,4.03e-08,6;UBERON:0004457,4.03e-08,6;UBERON:0000042,4.03e-08,6;UBERON:0004854,4.03e-08,6;UBERON:0009034,4.03e-08,6;UBERON:0002095,4.03e-08,6;UBERON:0004782,4.03e-08,6;UBERON:0003281,4.03e-08,6;UBERON:0009664,4.03e-08,6;UBERON:0002296,4.03e-08,6;UBERON:0005602,4.03e-08,6;UBERON:0001179,4.03e-08,6;UBERON:0006293,4.03e-08,6|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0.699561878128147,5.52058789376916,6.30726394586398,4.2438965179803,0,0.297872853602656,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.99132285847364,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,1.50363650493128,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p9@Kmo}} | ||
|EntrezGene=98256 | |||
|HGNC= | |||
|MCL_coexpression_id=18 | |||
|UniProt=Q91WN4 | |||
|association_with_transcript=-17bp_to_ENSMUST00000040250_5end | |||
|description=CAGE_peak_9_at_Kmo_5end | |||
|id=chr1:177562099..177562109,+ | |||
|ontology_enrichment_celltype=CL:0000553!2.69e-14!6;CL:0000556!2.69e-14!6;CL:0000050!3.19e-09!9;CL:0002027!1.01e-07!3;CL:0002006!1.01e-07!3;CL:0002024!1.01e-07!3;CL:0000414!2.23e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.45e-29,6;CL:0000556,1.45e-29,6;CL:0000050,6.57e-20,9;CL:0000839,6.11e-14,13;CL:0000945,3.34e-12,1;CL:0000236,3.34e-12,1;CL:0000826,3.34e-12,1;CL:0000763,2.07e-11,16;CL:0002031,3.38e-11,25;CL:0000049,1.13e-09,19;CL:0000988,8.62e-09,32;CL:0002032,8.62e-09,32;CL:0000037,8.62e-09,32;CL:0000837,8.62e-09,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.22e-12!48;UBERON:0002390!5.20e-10!45;UBERON:0003061!5.20e-10!45;UBERON:0002405!9.80e-08!70;UBERON:0003887!1.83e-07!10;UBERON:0001474!4.95e-07!22;UBERON:0004765!4.95e-07!22;UBERON:0001434!4.95e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.20e-12,1;UBERON:0001097,1.20e-12,1;UBERON:0003968,1.20e-12,1;UBERON:0001467,1.20e-12,1;UBERON:0002371,2.07e-11,16;UBERON:0002193,3.46e-11,48;UBERON:0002405,3.46e-11,48;UBERON:0002390,8.49e-09,45;UBERON:0003061,8.49e-09,45;UBERON:0001474,2.09e-08,22;UBERON:0004765,2.09e-08,22;UBERON:0001434,2.09e-08,22;UBERON:0002106,4.03e-08,6;UBERON:0004457,4.03e-08,6;UBERON:0000042,4.03e-08,6;UBERON:0004854,4.03e-08,6;UBERON:0009034,4.03e-08,6;UBERON:0002095,4.03e-08,6;UBERON:0004782,4.03e-08,6;UBERON:0003281,4.03e-08,6;UBERON:0009664,4.03e-08,6;UBERON:0002296,4.03e-08,6;UBERON:0005602,4.03e-08,6;UBERON:0001179,4.03e-08,6;UBERON:0006293,4.03e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.999329285446988,1.21485160433896,0.699561878128147,5.52058789376916,6.30726394586398,4.2438965179803,0,0.297872853602656,0.261199789138935,0.319984845586813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,0,0,0,0,0,0,0,0,0,0,0,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,6.99132285847364,0,0,0,0,0,0,0,0,0,0.884610551949874,0,0.220841518460394,0,0,0,0,0.255457055208591,0.239630249011841,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.518054945597687,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683483523191411,0,0,0.376736914009382,1.50363650493128,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0.0974578807397524,0.192423683280659,0,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342869252385415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p9@Kmo | |||
}} |
Revision as of 19:50, 13 September 2013
Short description: | p9@Kmo |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Kmo_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | -17bp_to_ENSMUST00000040250_5end |
EntrezGene: | Kmo |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.45e-29 | 6 |
megakaryocyte | 1.45e-29 | 6 |
megakaryocyte-erythroid progenitor cell | 6.57e-20 | 9 |
myeloid lineage restricted progenitor cell | 6.11e-14 | 13 |
lymphocyte of B lineage | 3.34e-12 | 1 |
B cell | 3.34e-12 | 1 |
pro-B cell | 3.34e-12 | 1 |
myeloid cell | 2.07e-11 | 16 |
hematopoietic lineage restricted progenitor cell | 3.38e-11 | 25 |
common myeloid progenitor | 1.13e-09 | 19 |
hematopoietic cell | 8.62e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.62e-09 | 32 |
hematopoietic stem cell | 8.62e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.62e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.20e-12 | 1 |
axillary lymph node | 1.20e-12 | 1 |
peripheral lymph node | 1.20e-12 | 1 |
shoulder | 1.20e-12 | 1 |
bone marrow | 2.07e-11 | 16 |
hemolymphoid system | 3.46e-11 | 48 |
immune system | 3.46e-11 | 48 |
hematopoietic system | 8.49e-09 | 45 |
blood island | 8.49e-09 | 45 |
bone element | 2.09e-08 | 22 |
skeletal element | 2.09e-08 | 22 |
skeletal system | 2.09e-08 | 22 |
spleen | 4.03e-08 | 6 |
cavity lining | 4.03e-08 | 6 |
serous membrane | 4.03e-08 | 6 |
gastrointestinal system mesentery | 4.03e-08 | 6 |
stomach region | 4.03e-08 | 6 |
mesentery | 4.03e-08 | 6 |
gastrointestinal system serosa | 4.03e-08 | 6 |
mesentery of stomach | 4.03e-08 | 6 |
gut mesentery | 4.03e-08 | 6 |
dorsal mesentery | 4.03e-08 | 6 |
dorsal mesogastrium | 4.03e-08 | 6 |
peritoneal cavity | 4.03e-08 | 6 |
spleen primordium | 4.03e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.