FFCP PHASE1:Mm9::chr6:69526509..69526516,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=63|UniProt=|association_with_transcript=-15bp_to_ENSMUST00000103357_5end|description=CAGE_peak_1_at_ENSMUST00000103357_5end|id=chr6:69526509..69526516,-|ontology_enrichment_celltype=CL:0000553!2.86e-19!6;CL:0000556!2.86e-19!6;CL:0000050!8.44e-13!9;CL:0000414!1.94e-10!11;CL:0000839!8.42e-09!13;CL:0000763!4.16e-07!16;CL:0002027!4.26e-07!3;CL:0002006!4.26e-07!3;CL:0002024!4.26e-07!3|ontology_enrichment_celltype_v019_2=CL:0000553,1.10e-23,6;CL:0000556,1.10e-23,6;CL:0000050,6.05e-16,9;CL:0000839,3.72e-11,13;CL:0000763,3.99e-09,16;CL:0000049,9.92e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002465!5.59e-15!3;UBERON:0001962!2.02e-10!2;UBERON:0001961!2.02e-10!2;UBERON:0001744!2.02e-10!2;UBERON:0002193!6.50e-10!48;UBERON:0004923!2.34e-08!24;UBERON:0002106!3.56e-07!6;UBERON:0004457!3.56e-07!6;UBERON:0000042!3.56e-07!6;UBERON:0004854!3.56e-07!6;UBERON:0009034!3.56e-07!6;UBERON:0002095!3.56e-07!6;UBERON:0004782!3.56e-07!6;UBERON:0003281!3.56e-07!6;UBERON:0009664!3.56e-07!6;UBERON:0002296!3.56e-07!6;UBERON:0005602!3.56e-07!6;UBERON:0001179!3.56e-07!6;UBERON:0006293!3.56e-07!6;UBERON:0002371!4.16e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.06e-27,3;UBERON:0001962,1.30e-18,2;UBERON:0001961,1.30e-18,2;UBERON:0001744,1.30e-18,2;UBERON:0002193,2.14e-11,48;UBERON:0002405,2.14e-11,48;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0003199,2.01e-10,1;UBERON:0002371,3.99e-09,16|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22722794128809,0.699561878128147,1.57731082679119,1.09691546884591,1.27316895539409,0,0,0,1.11994695955385,3.67054849707472,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.06282592765101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.27338845544205,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@ENSMUST00000103357}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=63 | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENSMUST00000103357_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000103357_5end | |||
|id=chr6:69526509..69526516,- | |||
|ontology_enrichment_celltype=CL:0000553!2.86e-19!6;CL:0000556!2.86e-19!6;CL:0000050!8.44e-13!9;CL:0000414!1.94e-10!11;CL:0000839!8.42e-09!13;CL:0000763!4.16e-07!16;CL:0002027!4.26e-07!3;CL:0002006!4.26e-07!3;CL:0002024!4.26e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.10e-23,6;CL:0000556,1.10e-23,6;CL:0000050,6.05e-16,9;CL:0000839,3.72e-11,13;CL:0000763,3.99e-09,16;CL:0000049,9.92e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002465!5.59e-15!3;UBERON:0001962!2.02e-10!2;UBERON:0001961!2.02e-10!2;UBERON:0001744!2.02e-10!2;UBERON:0002193!6.50e-10!48;UBERON:0004923!2.34e-08!24;UBERON:0002106!3.56e-07!6;UBERON:0004457!3.56e-07!6;UBERON:0000042!3.56e-07!6;UBERON:0004854!3.56e-07!6;UBERON:0009034!3.56e-07!6;UBERON:0002095!3.56e-07!6;UBERON:0004782!3.56e-07!6;UBERON:0003281!3.56e-07!6;UBERON:0009664!3.56e-07!6;UBERON:0002296!3.56e-07!6;UBERON:0005602!3.56e-07!6;UBERON:0001179!3.56e-07!6;UBERON:0006293!3.56e-07!6;UBERON:0002371!4.16e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002465,2.06e-27,3;UBERON:0001962,1.30e-18,2;UBERON:0001961,1.30e-18,2;UBERON:0001744,1.30e-18,2;UBERON:0002193,2.14e-11,48;UBERON:0002405,2.14e-11,48;UBERON:0000029,1.63e-10,1;UBERON:0001097,1.63e-10,1;UBERON:0003968,1.63e-10,1;UBERON:0001467,1.63e-10,1;UBERON:0003199,2.01e-10,1;UBERON:0002371,3.99e-09,16 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22722794128809,0.699561878128147,1.57731082679119,1.09691546884591,1.27316895539409,0,0,0,1.11994695955385,3.67054849707472,0,0,0,0.190023419456374,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,9.06282592765101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04365644166873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19609616558497,0,0,0,0.27338845544205,0.228778173206523,0,0.279902904647316,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@ENSMUST00000103357 | |||
}} |
Revision as of 10:29, 14 September 2013
Short description: | p1@ENSMUST00000103357 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000103357_5end |
Coexpression cluster: | MCL_coexpression_mm9:63 |
Association with transcript: | -15bp_to_ENSMUST00000103357_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.10e-23 | 6 |
megakaryocyte | 1.10e-23 | 6 |
megakaryocyte-erythroid progenitor cell | 6.05e-16 | 9 |
myeloid lineage restricted progenitor cell | 3.72e-11 | 13 |
myeloid cell | 3.99e-09 | 16 |
common myeloid progenitor | 9.92e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
lymphoid system | 2.06e-27 | 3 |
gut-associated lymphoid tissue | 1.30e-18 | 2 |
mucosa-associated lymphoid tissue | 1.30e-18 | 2 |
lymphoid tissue | 1.30e-18 | 2 |
hemolymphoid system | 2.14e-11 | 48 |
immune system | 2.14e-11 | 48 |
lymph node | 1.63e-10 | 1 |
axillary lymph node | 1.63e-10 | 1 |
peripheral lymph node | 1.63e-10 | 1 |
shoulder | 1.63e-10 | 1 |
egg chamber | 2.01e-10 | 1 |
bone marrow | 3.99e-09 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.